EnhancerDB
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  3. vista4528[chr1:200857233-200857815]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista4528[chr1:200857233-200857815]
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Tissue distribution of vista4528
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Transcription factor that possibly regulate vista4528[chr1:200857233-200857815]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr1 200857193 200857924 POLR2A UCSC Txn Factor no Conserved 107855564
chr1 200857387 200857766 RUNX3 UCSC Txn Factor no Conserved 107855579
chr1 200857433 200857662 TCF12 UCSC Txn Factor no Conserved 107855591
chr1 200857438 200857754 EBF1 UCSC Txn Factor no Conserved 107855593
chr1 200857443 200857682 SPI1 UCSC Txn Factor no Conserved 107855595
chr1 200857233 200857238 TFAP2A TRANSFAC yes 118430594
chr1 200857233 200857239 MZF1 JASPAR yes 118430595
chr1 200857328 200857333 GATA2 JASPAR yes 118430596
chr1 200857339 200857343 YY1 TRANSFAC yes 118430597
chr1 200857341 200857353 ZBTB7B JASPAR yes 118430598
chr1 200857345 200857355 REL JASPAR yes 118430599
chr1 200857345 200857360 STAT2 JASPAR yes 118430600
chr1 200857355 200857360 ETS2 TRANSFAC yes 118430601
chr1 200857355 200857369 TCF7L2 JASPAR yes 118430602
chr1 200857373 200857385 NHLH1 JASPAR yes 118430603
chr1 200857374 200857384 NHLH1 JASPAR yes 118430604
chr1 200857405 200857423 MAFF JASPAR yes 118430605
chr1 200857406 200857421 MAFK JASPAR yes 118430606
chr1 200857410 200857420 TFAP4 JASPAR yes 118430607
chr1 200857423 200857442 PAX5 JASPAR yes 118430608
chr1 200857435 200857443 FOXC1 JASPAR yes 118430609
chr1 200857469 200857474 MYC TRANSFAC yes 118430610
chr1 200857485 200857489 H4TF2 TRANSFAC yes 118430611
chr1 200857500 200857519 CTCF JASPAR yes 118430612
chr1 200857503 200857507 H1TF2 TRANSFAC yes 118430613
chr1 200857503 200857507 NFE TRANSFAC yes 118430614
chr1 200857503 200857507 SRF TRANSFAC yes 118430615
chr1 200857503 200857509 NFYC TRANSFAC yes 118430616
chr1 200857507 200857525 ESR2 JASPAR yes 118430617
chr1 200857517 200857538 ZNF263 JASPAR yes 118430618
chr1 200857526 200857536 ID4 JASPAR yes 118430619
chr1 200857526 200857536 TCF3 JASPAR yes 118430620
chr1 200857526 200857536 TCF4 JASPAR yes 118430621
chr1 200857527 200857536 SNAI2 JASPAR yes 118430622
chr1 200857528 200857533 USF2 TRANSFAC yes 118430623
chr1 200857532 200857543 TFAP2C JASPAR yes 118430624
chr1 200857550 200857561 FLI1 JASPAR yes 118430625
chr1 200857551 200857558 PEA3 TRANSFAC yes 118430626
chr1 200857559 200857563 ESR1 TRANSFAC yes 118430627
chr1 200857563 200857576 ELF1 JASPAR yes 118430628
chr1 200857566 200857573 SPIB JASPAR yes 118430629
chr1 200857566 200857576 ETV6 JASPAR yes 118430630
chr1 200857566 200857577 FLI1 JASPAR yes 118430631
chr1 200857597 200857607 RELA JASPAR yes 118430632
chr1 200857597 200857607 REL JASPAR yes 118430633
chr1 200857597 200857608 NFKB1 JASPAR yes 118430634
chr1 200857623 200857640 RARA JASPAR yes 118430635
chr1 200857623 200857640 RXRA JASPAR yes 118430636
chr1 200857624 200857628 LFA1 TRANSFAC yes 118430637
chr1 200857629 200857636 MEIS1 JASPAR yes 118430638
chr1 200857629 200857637 MEIS2 JASPAR yes 118430639
chr1 200857629 200857637 MEIS3 JASPAR yes 118430640
chr1 200857635 200857639 LFA1 TRANSFAC yes 118430641
chr1 200857640 200857644 NFE TRANSFAC yes 118430642
chr1 200857658 200857669 E2F6 JASPAR yes 118430643
chr1 200857661 200857682 ZNF263 JASPAR yes 118430644
chr1 200857677 200857692 TFAP2C JASPAR yes 118430645
chr1 200857678 200857689 EBF1 JASPAR yes 118430646
chr1 200857683 200857704 ZNF263 JASPAR yes 118430647
chr1 200857688 200857709 ZNF263 JASPAR yes 118430648
chr1 200857695 200857716 ZNF263 JASPAR yes 118430649
chr1 200857696 200857706 SP1 JASPAR yes 118430650
chr1 200857696 200857717 ZNF263 JASPAR yes 118430651
chr1 200857698 200857712 STAT1 JASPAR yes 118430652
chr1 200857698 200857713 PRDM1 JASPAR yes 118430653
chr1 200857710 200857715 TFAP2A TRANSFAC yes 118430654
chr1 200857710 200857716 MZF1 JASPAR yes 118430655
chr1 200857712 200857717 ETS2 TRANSFAC yes 118430656
chr1 200857722 200857743 ZNF263 JASPAR yes 118430657
chr1 200857724 200857734 SP1 JASPAR yes 118430658
chr1 200857730 200857740 SP1 JASPAR yes 118430659
chr1 200857733 200857743 GABPA JASPAR yes 118430660
chr1 200857733 200857746 ELF1 JASPAR yes 118430661
chr1 200857736 200857743 SPIB JASPAR yes 118430662
chr1 200857758 200857770 TEAD1 JASPAR yes 118430663
chr1 200857763 200857774 CEBPA JASPAR yes 118430664
chr1 200857764 200857774 CEBPB JASPAR yes 118430665
chr1 200857764 200857774 CEBPD JASPAR yes 118430666
chr1 200857764 200857774 CEBPE JASPAR yes 118430667
chr1 200857764 200857775 CEBPB JASPAR yes 118430668
chr1 200857781 200857786 GATA2 JASPAR yes 118430669
chr1 200857785 200857800 TFAP2A JASPAR yes 118430670
chr1 200857788 200857800 TFAP2A JASPAR yes 118430671
chr1 200857788 200857800 TFAP2B JASPAR yes 118430672
chr1 200857788 200857800 TFAP2C JASPAR yes 118430673
chr1 200857790 200857799 TFAP2A JASPAR yes 118430674
chr1 200857792 200857801 THAP1 JASPAR yes 118430675
chr1 200857795 200857799 LFA1 TRANSFAC yes 118430676
SNP sites on vista4528[chr1:200857233-200857815]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr1 200857445 rs72746888 G A
EBF1 POLR2A RUNX3 SPI1 TCF12
850398
chr1 200857461 rs142597275 GC G
EBF1 POLR2A RUNX3 SPI1 TCF12
850399
chr1 200857466 rs180809309 C T
EBF1 POLR2A RUNX3 SPI1 TCF12
850400
chr1 200857642 rs115847935 T C
EBF1 NFE POLR2A RUNX3 SPI1 TCF12
850401
chr1 200857656 rs111233339 C T
EBF1 POLR2A RUNX3 SPI1 TCF12
850402
chr1 200857658 rs190079135 C G,T
E2F6 EBF1 POLR2A RUNX3 SPI1 TCF12
850403
chr1 200857659 rs182926132 G A,C
E2F6 EBF1 POLR2A RUNX3 SPI1 TCF12
850404
chr1 200857672 rs185688401 C T
EBF1 POLR2A RUNX3 SPI1 ZNF263
850405
chr1 200857695 rs556530426 C CG
EBF1 POLR2A RUNX3 ZNF263
850406
chr1 200857774 rs3753955 T C
CEBPA CEBPB CEBPD CEBPE POLR2A
850407
chr1 200857796 rs34219095 G A,C,T
LFA1 POLR2A TFAP2A TFAP2B TFAP2C THAP1
850408
chr1 200857809 rs3753956 A G
POLR2A
850409
Genes possibly regulated by vista4528[chr1:200857233-200857815]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr1 200842083 200843306 + GPR25 ENSG00000170128.2 200842083 0.93 0.0 1696 84850
chr1 200860176 200884863 + C1orf106 ENSG00000163362.6 200860176 0.94 1.0 1697 97639
Expression level of Genes
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miRNAs possibly regulated by vista4528[chr1:200857233-200857815]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results