EnhancerDB
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  3. vista45280[chr4:85494002-85494148]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista45280[chr4:85494002-85494148]
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Tissue distribution of vista45280
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Transcription factor that possibly regulate vista45280[chr4:85494002-85494148]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr4 85493988 85494003 MAFK JASPAR yes 49253008
chr4 85493988 85494003 MAFK JASPAR yes 90958264
chr4 85493992 85494003 NRL JASPAR yes 49253009
chr4 85493992 85494003 NRL JASPAR yes 90958265
chr4 85493998 85494008 NEUROG2 JASPAR yes 49253010
chr4 85493998 85494008 NEUROG2 JASPAR yes 90958266
chr4 85494000 85494012 POU2F1 JASPAR yes 49253011
chr4 85494000 85494012 POU2F1 JASPAR yes 90958267
chr4 85494000 85494013 POU3F3 JASPAR yes 49253012
chr4 85494000 85494013 POU3F3 JASPAR yes 90958268
chr4 85494002 85494014 FOXC2 JASPAR yes 49253013
chr4 85494002 85494014 FOXC2 JASPAR yes 90958269
chr4 85494003 85494014 FOXC1 JASPAR yes 49253014
chr4 85494003 85494014 FOXC1 JASPAR yes 90958270
chr4 85494004 85494015 FOXH1 JASPAR yes 49253015
chr4 85494004 85494015 FOXH1 JASPAR yes 90958271
chr4 85494006 85494019 DUXA JASPAR yes 49253016
chr4 85494006 85494019 DUXA JASPAR yes 90958272
chr4 85494007 85494018 DUX4 JASPAR yes 49253017
chr4 85494007 85494018 PHOX2A JASPAR yes 49253018
chr4 85494007 85494018 DUX4 JASPAR yes 90958273
chr4 85494007 85494018 PHOX2A JASPAR yes 90958274
chr4 85494025 85494041 POU4F2 JASPAR yes 49253019
chr4 85494025 85494041 POU4F2 JASPAR yes 90958275
chr4 85494039 85494051 TEF JASPAR yes 49253020
chr4 85494039 85494051 TEF JASPAR yes 90958276
chr4 85494063 85494073 MAX JASPAR yes 49253021
chr4 85494063 85494073 MAX JASPAR yes 90958277
chr4 85494063 85494074 USF1 JASPAR yes 49253022
chr4 85494063 85494074 USF2 JASPAR yes 49253023
chr4 85494063 85494074 USF1 JASPAR yes 90958278
chr4 85494063 85494074 USF2 JASPAR yes 90958279
chr4 85494067 85494077 MAX JASPAR yes 49253024
chr4 85494067 85494077 MAX JASPAR yes 90958280
chr4 85494071 85494089 RARA JASPAR yes 49253025
chr4 85494071 85494089 RARA JASPAR yes 90958281
chr4 85494073 85494077 ESR1 TRANSFAC yes 49253026
chr4 85494073 85494077 ESR1 TRANSFAC yes 90958282
chr4 85494091 85494101 SREBF2 JASPAR yes 49253027
chr4 85494091 85494101 SREBF2 JASPAR yes 90958283
chr4 85494096 85494109 DUXA JASPAR yes 49253028
chr4 85494096 85494109 DUXA JASPAR yes 90958284
chr4 85494100 85494110 GSC2 JASPAR yes 49253029
chr4 85494100 85494110 GSC2 JASPAR yes 90958285
chr4 85494101 85494109 OTX2 JASPAR yes 49253030
chr4 85494101 85494109 OTX2 JASPAR yes 90958286
chr4 85494101 85494110 PITX3 JASPAR yes 49253031
chr4 85494101 85494110 PITX3 JASPAR yes 90958287
chr4 85494107 85494125 SRF JASPAR yes 49253032
chr4 85494107 85494125 SRF JASPAR yes 90958288
chr4 85494109 85494125 SRF JASPAR yes 49253033
chr4 85494109 85494125 SRF JASPAR yes 90958289
chr4 85494109 85494127 SRF JASPAR yes 49253034
chr4 85494109 85494127 SRF JASPAR yes 90958290
chr4 85494110 85494122 SRF JASPAR yes 49253035
chr4 85494110 85494122 SRF JASPAR yes 90958291
chr4 85494115 85494119 TEAD2 TRANSFAC yes 49253036
chr4 85494115 85494119 TEAD2 TRANSFAC yes 90958292
chr4 85494120 85494131 ESRRA JASPAR yes 49253037
chr4 85494120 85494131 ESRRA JASPAR yes 90958293
chr4 85494120 85494133 NR2F1 JASPAR yes 49253038
chr4 85494120 85494133 NR2F1 JASPAR yes 90958294
chr4 85494122 85494130 NR4A2 JASPAR yes 49253039
chr4 85494122 85494130 NR4A2 JASPAR yes 90958295
chr4 85494124 85494128 ESR1 TRANSFAC yes 49253040
chr4 85494124 85494128 ESR1 TRANSFAC yes 90958296
chr4 85494131 85494136 GATA2 JASPAR yes 49253041
chr4 85494131 85494136 GATA2 JASPAR yes 90958297
chr4 85494134 85494149 PRDM1 JASPAR yes 49253042
chr4 85494134 85494149 PRDM1 JASPAR yes 90958298
chr4 85494135 85494156 ZNF263 JASPAR yes 49253043
chr4 85494135 85494156 ZNF263 JASPAR yes 90958299
SNP sites on vista45280[chr4:85494002-85494148]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr4 85494008 rs150319554 T A
DUX4 DUXA FOXC1 FOXC2 FOXH1 NEUROG2 PHOX2A POU2F1 POU3F3
7659016
chr4 85494042 rs138050596 T C
TEF
7659017
chr4 85494094 rs541436406 G T
SREBF2
7659018
chr4 85494105 rs184551137 A G
DUXA GSC2 OTX2 PITX3
7659019
chr4 85494138 rs188949698 C A,T
PRDM1 ZNF263
7659020
Genes possibly regulated by vista45280[chr4:85494002-85494148]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr4 85413140 85419603 - NKX6-1 ENSG00000163623.5 85419603 1.0 1.0 4840 25601
chr4 85504132 85572491 + CDS1 ENSG00000163624.5 85504132 0.83 1.0 4841 90016
Expression level of Genes
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miRNAs possibly regulated by vista45280[chr4:85494002-85494148]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results