EnhancerDB
  1. Home
  2. Enhancers
  3. vista45294[chr4:86395219-86395452]
View enhancers around input chromosomal region
Back to top

Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista45294[chr4:86395219-86395452]
Back to top
Tissue distribution of vista45294
Back to top
Transcription factor that possibly regulate vista45294[chr4:86395219-86395452]
Back to top
Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr4 86395223 86395228 H4TF1 TRANSFAC yes 49253716
chr4 86395223 86395228 H4TF1 TRANSFAC yes 90997002
chr4 86395242 86395252 HOXA13 JASPAR yes 49253717
chr4 86395242 86395252 HOXB13 JASPAR yes 49253718
chr4 86395242 86395252 HOXD13 JASPAR yes 49253719
chr4 86395242 86395252 HOXA13 JASPAR yes 90997003
chr4 86395242 86395252 HOXB13 JASPAR yes 90997004
chr4 86395242 86395252 HOXD13 JASPAR yes 90997005
chr4 86395242 86395253 HOXA10 JASPAR yes 49253720
chr4 86395242 86395253 HOXA10 JASPAR yes 90997006
chr4 86395243 86395252 CDX1 JASPAR yes 49253721
chr4 86395243 86395252 CDX1 JASPAR yes 90997007
chr4 86395243 86395253 MNX1 JASPAR yes 49253722
chr4 86395243 86395253 MNX1 JASPAR yes 90997008
chr4 86395243 86395254 CDX2 JASPAR yes 49253723
chr4 86395243 86395254 CDX2 JASPAR yes 90997009
chr4 86395337 86395355 RARA JASPAR yes 49253724
chr4 86395337 86395355 RARA JASPAR yes 90997010
chr4 86395350 86395361 EBF1 JASPAR yes 49253725
chr4 86395350 86395361 EBF1 JASPAR yes 90997011
chr4 86395356 86395367 NFKB1 JASPAR yes 49253726
chr4 86395356 86395367 NFKB1 JASPAR yes 90997012
chr4 86395356 86395369 NFKB2 JASPAR yes 49253727
chr4 86395356 86395369 NFKB2 JASPAR yes 90997013
chr4 86395357 86395367 NFKB1 JASPAR yes 49253728
chr4 86395357 86395367 RELA JASPAR yes 49253729
chr4 86395357 86395367 REL JASPAR yes 49253730
chr4 86395357 86395367 NFKB1 JASPAR yes 90997014
chr4 86395357 86395367 RELA JASPAR yes 90997015
chr4 86395357 86395367 REL JASPAR yes 90997016
chr4 86395357 86395368 NFKB1 JASPAR yes 49253731
chr4 86395357 86395368 NFKB1 JASPAR yes 90997017
chr4 86395361 86395372 E2F4 JASPAR yes 49253732
chr4 86395361 86395372 E2F6 JASPAR yes 49253733
chr4 86395361 86395372 E2F4 JASPAR yes 90997018
chr4 86395361 86395372 E2F6 JASPAR yes 90997019
chr4 86395362 86395369 E2F1 TRANSFAC yes 49253734
chr4 86395362 86395369 E2F1 TRANSFAC yes 90997020
chr4 86395362 86395370 E2F1 JASPAR yes 49253735
chr4 86395362 86395370 E2F1 JASPAR yes 90997021
chr4 86395365 86395379 PLAG1 JASPAR yes 49253736
chr4 86395365 86395379 PLAG1 JASPAR yes 90997022
chr4 86395411 86395416 SP1 TRANSFAC yes 49253737
chr4 86395411 86395416 SP1 TRANSFAC yes 90997023
chr4 86395414 86395435 IRF1 JASPAR yes 49253738
chr4 86395414 86395435 IRF1 JASPAR yes 90997024
chr4 86395419 86395434 FOXP1 JASPAR yes 49253739
chr4 86395419 86395434 FOXP1 JASPAR yes 90997025
chr4 86395419 86395440 IRF1 JASPAR yes 49253740
chr4 86395419 86395440 IRF1 JASPAR yes 90997026
chr4 86395421 86395436 FOXP1 JASPAR yes 49253741
chr4 86395421 86395436 FOXP1 JASPAR yes 90997027
chr4 86395426 86395438 FOXC2 JASPAR yes 49253742
chr4 86395426 86395438 FOXC2 JASPAR yes 90997028
chr4 86395427 86395438 FOXC1 JASPAR yes 49253743
chr4 86395427 86395438 FOXC1 JASPAR yes 90997029
chr4 86395427 86395448 IRF1 JASPAR yes 49253744
chr4 86395427 86395448 IRF1 JASPAR yes 90997030
chr4 86395428 86395432 YY1 TRANSFAC yes 49253745
chr4 86395428 86395432 YY1 TRANSFAC yes 90997031
SNP sites on vista45294[chr4:86395219-86395452]
Back to top
chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr4 86395292 rs141937112 C G,T no 7661733
chr4 86395420 rs5859975 C CT,CTT
FOXP1 IRF1
7661734
chr4 86395430 rs1540594 A T
FOXC1 FOXC2 FOXP1 IRF1 YY1
7661735
chr4 86395449 rs531691510 T A no 7661736
Genes possibly regulated by vista45294[chr4:86395219-86395452]
Back to top
Details of Genes
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr4 86396267 86923823 + ARHGAP24 ENSG00000138639.13 86396267 0.94 0.95 4843 99185
Expression level of Genes
Back to top
miRNAs possibly regulated by vista45294[chr4:86395219-86395452]
Back to top
Details of miRNAs
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
Back to top
No results