EnhancerDB
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  3. vista45323[chr4:87839773-87840193]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista45323[chr4:87839773-87840193]
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Tissue distribution of vista45323
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Transcription factor that possibly regulate vista45323[chr4:87839773-87840193]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr4 87839758 87839773 SCRT1 JASPAR yes 49255179
chr4 87839758 87839773 SCRT1 JASPAR yes 91081825
chr4 87839772 87839781 NKX3-2 JASPAR yes 49255180
chr4 87839772 87839781 NKX3-2 JASPAR yes 91081826
chr4 87839791 87839803 HNF1B JASPAR yes 49255181
chr4 87839791 87839803 HNF1B JASPAR yes 91081827
chr4 87839798 87839806 RHOXF1 JASPAR yes 49255182
chr4 87839798 87839806 RHOXF1 JASPAR yes 91081828
chr4 87839811 87839825 SPI1 JASPAR yes 49255183
chr4 87839811 87839825 SPI1 JASPAR yes 91081829
chr4 87839841 87839861 PPARG JASPAR yes 49255184
chr4 87839841 87839861 PPARG JASPAR yes 91081830
chr4 87839843 87839858 AR JASPAR yes 49255185
chr4 87839843 87839858 AR JASPAR yes 91081831
chr4 87839843 87839861 NR3C1 JASPAR yes 49255186
chr4 87839843 87839861 NR3C1 JASPAR yes 91081832
chr4 87839866 87839880 EBF1 JASPAR yes 49255187
chr4 87839866 87839880 EBF1 JASPAR yes 91081833
chr4 87839868 87839879 EBF1 JASPAR yes 49255188
chr4 87839868 87839879 EBF1 JASPAR yes 91081834
chr4 87839872 87839885 NFKB1 JASPAR yes 49255189
chr4 87839872 87839885 NFKB2 JASPAR yes 49255190
chr4 87839872 87839885 NFKB1 JASPAR yes 91081835
chr4 87839872 87839885 NFKB2 JASPAR yes 91081836
chr4 87839873 87839883 NFKB1 JASPAR yes 49255191
chr4 87839873 87839883 RELA JASPAR yes 49255192
chr4 87839873 87839883 REL JASPAR yes 49255193
chr4 87839873 87839883 NFKB1 JASPAR yes 91081837
chr4 87839873 87839883 RELA JASPAR yes 91081838
chr4 87839873 87839883 REL JASPAR yes 91081839
chr4 87839873 87839884 NFKB1 JASPAR yes 49255194
chr4 87839873 87839884 NFKB1 JASPAR yes 91081840
chr4 87839876 87839881 H4TF1 TRANSFAC yes 49255195
chr4 87839876 87839881 H4TF1 TRANSFAC yes 91081841
chr4 87839877 87839885 FEV JASPAR yes 49255196
chr4 87839877 87839885 FEV JASPAR yes 91081842
chr4 87839890 87839896 MYC TRANSFAC yes 49255197
chr4 87839890 87839896 MYC TRANSFAC yes 91081843
chr4 87839912 87839932 PPARG JASPAR yes 49255198
chr4 87839912 87839932 PPARG JASPAR yes 91081844
chr4 87839924 87839935 EBF1 JASPAR yes 49255199
chr4 87839924 87839935 EBF1 JASPAR yes 91081845
chr4 87839946 87839966 RREB1 JASPAR yes 49255200
chr4 87839946 87839966 RREB1 JASPAR yes 91081846
chr4 87839954 87839974 RREB1 JASPAR yes 49255201
chr4 87839954 87839974 RREB1 JASPAR yes 91081847
chr4 87839956 87839976 RREB1 JASPAR yes 49255202
chr4 87839956 87839976 RREB1 JASPAR yes 91081848
chr4 87839962 87839982 RREB1 JASPAR yes 49255203
chr4 87839962 87839982 RREB1 JASPAR yes 91081849
chr4 87839964 87839984 RREB1 JASPAR yes 49255204
chr4 87839964 87839984 RREB1 JASPAR yes 91081850
chr4 87839966 87839986 RREB1 JASPAR yes 49255205
chr4 87839966 87839986 RREB1 JASPAR yes 91081851
chr4 87839968 87839988 RREB1 JASPAR yes 49255206
chr4 87839968 87839988 RREB1 JASPAR yes 91081852
chr4 87839986 87839996 BHLHE40 JASPAR yes 49255207
chr4 87839986 87839996 BHLHE41 JASPAR yes 49255208
chr4 87839986 87839996 MLXIPL JASPAR yes 49255209
chr4 87839986 87839996 MLX JASPAR yes 49255210
chr4 87839986 87839996 MNT JASPAR yes 49255211
chr4 87839986 87839996 TFE3 JASPAR yes 49255212
chr4 87839986 87839996 BHLHE40 JASPAR yes 91081853
chr4 87839986 87839996 BHLHE41 JASPAR yes 91081854
chr4 87839986 87839996 MLXIPL JASPAR yes 91081855
chr4 87839986 87839996 MLX JASPAR yes 91081856
chr4 87839986 87839996 MNT JASPAR yes 91081857
chr4 87839986 87839996 TFE3 JASPAR yes 91081858
chr4 87839987 87839997 MAX JASPAR yes 49255213
chr4 87839987 87839997 MAX JASPAR yes 91081859
chr4 87839988 87839993 MYC TRANSFAC yes 49255214
chr4 87839988 87839993 USF1 TRANSFAC yes 49255215
chr4 87839988 87839993 USF2 TRANSFAC yes 49255216
chr4 87839988 87839993 MYC TRANSFAC yes 91081860
chr4 87839988 87839993 USF1 TRANSFAC yes 91081861
chr4 87839988 87839993 USF2 TRANSFAC yes 91081862
chr4 87839997 87840002 TFAP2A TRANSFAC yes 49255217
chr4 87839997 87840002 TFAP2A TRANSFAC yes 91081863
chr4 87839997 87840003 MZF1 JASPAR yes 49255218
chr4 87839997 87840003 MZF1 JASPAR yes 91081864
chr4 87840003 87840013 HOXA13 JASPAR yes 49255219
chr4 87840003 87840013 HOXB13 JASPAR yes 49255220
chr4 87840003 87840013 HOXD13 JASPAR yes 49255221
chr4 87840003 87840013 HOXA13 JASPAR yes 91081865
chr4 87840003 87840013 HOXB13 JASPAR yes 91081866
chr4 87840003 87840013 HOXD13 JASPAR yes 91081867
chr4 87840011 87840018 SPIB JASPAR yes 49255222
chr4 87840011 87840018 SPIB JASPAR yes 91081868
chr4 87840021 87840032 USF2 JASPAR yes 49255223
chr4 87840021 87840032 USF2 JASPAR yes 91081869
chr4 87840022 87840032 TFEB JASPAR yes 49255224
chr4 87840022 87840032 TFEC JASPAR yes 49255225
chr4 87840022 87840032 TFEB JASPAR yes 91081870
chr4 87840022 87840032 TFEC JASPAR yes 91081871
chr4 87840027 87840045 ESR1 JASPAR yes 49255226
chr4 87840027 87840045 ESR1 JASPAR yes 91081872
chr4 87840052 87840060 MEIS2 JASPAR yes 49255227
chr4 87840052 87840060 MEIS3 JASPAR yes 49255228
chr4 87840052 87840060 MEIS2 JASPAR yes 91081873
chr4 87840052 87840060 MEIS3 JASPAR yes 91081874
chr4 87840059 87840065 YY1 JASPAR yes 49255229
chr4 87840059 87840065 YY1 JASPAR yes 91081875
chr4 87840084 87840094 GCM2 JASPAR yes 49255230
chr4 87840084 87840094 GCM2 JASPAR yes 91081876
chr4 87840084 87840095 GCM1 JASPAR yes 49255231
chr4 87840084 87840095 GCM1 JASPAR yes 91081877
chr4 87840091 87840105 JUN JASPAR yes 49255232
chr4 87840091 87840105 JUN JASPAR yes 91081878
chr4 87840094 87840105 FOSL2 JASPAR yes 49255233
chr4 87840094 87840105 JUNB JASPAR yes 49255234
chr4 87840094 87840105 FOSL2 JASPAR yes 91081879
chr4 87840094 87840105 JUNB JASPAR yes 91081880
chr4 87840095 87840106 FOS JASPAR yes 49255235
chr4 87840095 87840106 FOSL1 JASPAR yes 49255236
chr4 87840095 87840106 JUND JASPAR yes 49255237
chr4 87840095 87840106 FOS JASPAR yes 91081881
chr4 87840095 87840106 FOSL1 JASPAR yes 91081882
chr4 87840095 87840106 JUND JASPAR yes 91081883
chr4 87840096 87840103 JUN TRANSFAC yes 49255238
chr4 87840096 87840103 JUN TRANSFAC yes 91081884
chr4 87840096 87840110 JUN JASPAR yes 49255239
chr4 87840096 87840110 JUN JASPAR yes 91081885
chr4 87840097 87840108 BATF JASPAR yes 49255240
chr4 87840097 87840108 BATF JASPAR yes 91081886
chr4 87840130 87840135 ETS2 TRANSFAC yes 49255241
chr4 87840130 87840135 ETS2 TRANSFAC yes 91081887
chr4 87840138 87840149 CEBPA JASPAR yes 49255242
chr4 87840138 87840149 CEBPA JASPAR yes 91081888
chr4 87840138 87840150 HLF JASPAR yes 49255243
chr4 87840138 87840150 HLF JASPAR yes 91081889
chr4 87840139 87840150 CEBPB JASPAR yes 49255244
chr4 87840139 87840150 CEBPB JASPAR yes 91081890
chr4 87840156 87840167 ESRRB JASPAR yes 49255245
chr4 87840156 87840167 ESRRB JASPAR yes 91081891
chr4 87840157 87840172 HNF4G JASPAR yes 49255246
chr4 87840157 87840172 HNF4G JASPAR yes 91081892
chr4 87840158 87840173 HNF4A JASPAR yes 49255247
chr4 87840158 87840173 HNF4A JASPAR yes 91081893
chr4 87840175 87840187 TFAP2B JASPAR yes 49255248
chr4 87840175 87840187 TFAP2B JASPAR yes 91081894
chr4 87840182 87840186 LFA1 TRANSFAC yes 49255249
chr4 87840182 87840186 LFA1 TRANSFAC yes 91081895
SNP sites on vista45323[chr4:87839773-87840193]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr4 87839844 rs1584346 G A
AR NR3C1 PPARG
7668433
chr4 87839882 rs148307313 C A
FEV NFKB1 NFKB2 REL RELA
7668434
chr4 87839963 rs532054303 CGTGTGT C
RREB1
7668435
Genes possibly regulated by vista45323[chr4:87839773-87840193]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr4 87744621 87770416 - SLC10A6 ENSG00000145283.7 87770416 0.97 0.98 4846 30643
chr4 87797358 87857354 - C4orf36 ENSG00000163633.6 87857354 0.84 1.0 4847 82839
chr4 87856154 88062206 + AFF1 ENSG00000172493.16 87856154 0.74 0.99 4848 84039
Expression level of Genes
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miRNAs possibly regulated by vista45323[chr4:87839773-87840193]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results