EnhancerDB
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  3. vista45347[chr4:88480312-88480555]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista45347[chr4:88480312-88480555]
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Tissue distribution of vista45347
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Transcription factor that possibly regulate vista45347[chr4:88480312-88480555]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr4 88480301 88480312 CEBPA JASPAR yes 49256206
chr4 88480301 88480312 CEBPA JASPAR yes 91127757
chr4 88480302 88480313 CEBPB JASPAR yes 49256207
chr4 88480302 88480313 CEBPB JASPAR yes 91127758
chr4 88480312 88480330 MAFF JASPAR yes 49256208
chr4 88480312 88480330 MAFF JASPAR yes 91127759
chr4 88480326 88480329 MYB TRANSFAC yes 49256209
chr4 88480326 88480329 MYB TRANSFAC yes 91127760
chr4 88480360 88480374 STAT1 JASPAR yes 49256210
chr4 88480360 88480374 STAT1 JASPAR yes 91127761
chr4 88480360 88480375 PRDM1 JASPAR yes 49256211
chr4 88480360 88480375 STAT2 JASPAR yes 49256212
chr4 88480360 88480375 PRDM1 JASPAR yes 91127762
chr4 88480360 88480375 STAT2 JASPAR yes 91127763
chr4 88480361 88480367 HiNF-A TRANSFAC yes 49256213
chr4 88480361 88480367 HiNF-A TRANSFAC yes 91127764
chr4 88480361 88480376 SOX21 JASPAR yes 49256214
chr4 88480361 88480376 SOX21 JASPAR yes 91127765
chr4 88480361 88480377 SOX4 JASPAR yes 49256215
chr4 88480361 88480377 SOX4 JASPAR yes 91127766
chr4 88480377 88480388 NFE2 JASPAR yes 49256216
chr4 88480377 88480388 NFE2 JASPAR yes 91127767
chr4 88480417 88480431 ATF7 JASPAR yes 49256217
chr4 88480417 88480431 BATF3 JASPAR yes 49256218
chr4 88480417 88480431 ATF7 JASPAR yes 91127768
chr4 88480417 88480431 BATF3 JASPAR yes 91127769
chr4 88480418 88480430 JDP2 JASPAR yes 49256219
chr4 88480418 88480430 JDP2 JASPAR yes 91127770
chr4 88480418 88480431 ATF4 JASPAR yes 49256220
chr4 88480418 88480431 ATF4 JASPAR yes 91127771
chr4 88480418 88480433 JUND JASPAR yes 49256221
chr4 88480418 88480433 JUND JASPAR yes 91127772
chr4 88480419 88480432 JUN JASPAR yes 49256222
chr4 88480419 88480432 JUN JASPAR yes 91127773
chr4 88480420 88480428 CREB1 JASPAR yes 49256223
chr4 88480420 88480428 CREB1 JASPAR yes 91127774
chr4 88480430 88480444 TCF7L2 JASPAR yes 49256224
chr4 88480430 88480444 TCF7L2 JASPAR yes 91127775
chr4 88480449 88480455 GATA3 JASPAR yes 49256225
chr4 88480449 88480455 GATA3 JASPAR yes 91127776
chr4 88480459 88480475 SOX4 JASPAR yes 49256226
chr4 88480459 88480475 SOX4 JASPAR yes 91127777
chr4 88480466 88480485 RFX2 JASPAR yes 49256227
chr4 88480466 88480485 RFX2 JASPAR yes 91127778
chr4 88480470 88480486 RFX2 JASPAR yes 49256228
chr4 88480470 88480486 RFX3 JASPAR yes 49256229
chr4 88480470 88480486 RFX4 JASPAR yes 49256230
chr4 88480470 88480486 RFX5 JASPAR yes 49256231
chr4 88480470 88480486 RFX2 JASPAR yes 91127779
chr4 88480470 88480486 RFX3 JASPAR yes 91127780
chr4 88480470 88480486 RFX4 JASPAR yes 91127781
chr4 88480470 88480486 RFX5 JASPAR yes 91127782
chr4 88480471 88480480 NFIX JASPAR yes 49256232
chr4 88480471 88480480 NFIX JASPAR yes 91127783
chr4 88480473 88480479 NFIC JASPAR yes 49256233
chr4 88480473 88480479 NFIC JASPAR yes 91127784
chr4 88480509 88480513 YY1 TRANSFAC yes 49256234
chr4 88480509 88480513 YY1 TRANSFAC yes 91127785
chr4 88480509 88480524 FOXA1 JASPAR yes 49256235
chr4 88480509 88480524 FOXA1 JASPAR yes 91127786
chr4 88480511 88480523 FOXC2 JASPAR yes 49256236
chr4 88480511 88480523 FOXC2 JASPAR yes 91127787
chr4 88480511 88480524 POU2F2 JASPAR yes 49256237
chr4 88480511 88480524 POU2F2 JASPAR yes 91127788
chr4 88480511 88480525 POU1F1 JASPAR yes 49256238
chr4 88480511 88480525 POU1F1 JASPAR yes 91127789
chr4 88480512 88480523 FOXB1 JASPAR yes 49256239
chr4 88480512 88480523 FOXC1 JASPAR yes 49256240
chr4 88480512 88480523 FOXB1 JASPAR yes 91127790
chr4 88480512 88480523 FOXC1 JASPAR yes 91127791
chr4 88480512 88480524 POU3F1 JASPAR yes 49256241
chr4 88480512 88480524 POU3F2 JASPAR yes 49256242
chr4 88480512 88480524 POU3F1 JASPAR yes 91127792
chr4 88480512 88480524 POU3F2 JASPAR yes 91127793
chr4 88480512 88480525 POU3F3 JASPAR yes 49256243
chr4 88480512 88480525 POU3F3 JASPAR yes 91127794
chr4 88480513 88480517 YY1 TRANSFAC yes 49256244
chr4 88480513 88480517 YY1 TRANSFAC yes 91127795
chr4 88480513 88480524 FOXA1 JASPAR yes 49256245
chr4 88480513 88480524 FOXA1 JASPAR yes 91127796
chr4 88480514 88480521 POU2F1 TRANSFAC yes 49256246
chr4 88480514 88480521 POU2F2C TRANSFAC yes 49256247
chr4 88480514 88480521 POU2F2 TRANSFAC yes 49256248
chr4 88480514 88480521 POU2F1 TRANSFAC yes 91127797
chr4 88480514 88480521 POU2F2C TRANSFAC yes 91127798
chr4 88480514 88480521 POU2F2 TRANSFAC yes 91127799
chr4 88480514 88480522 POU2F1 TRANSFAC yes 49256249
chr4 88480514 88480522 POU2F1 TRANSFAC yes 91127800
chr4 88480514 88480523 POU3F4 JASPAR yes 49256250
chr4 88480514 88480523 POU5F1B JASPAR yes 49256251
chr4 88480514 88480523 POU3F4 JASPAR yes 91127801
chr4 88480514 88480523 POU5F1B JASPAR yes 91127802
chr4 88480521 88480528 TBP TRANSFAC yes 49256252
chr4 88480521 88480528 TFIID TRANSFAC yes 49256253
chr4 88480521 88480528 TBP TRANSFAC yes 91127803
chr4 88480521 88480528 TFIID TRANSFAC yes 91127804
chr4 88480547 88480551 YY1 TRANSFAC yes 49256254
chr4 88480547 88480551 YY1 TRANSFAC yes 91127805
SNP sites on vista45347[chr4:88480312-88480555]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr4 88480342 rs77063449 T C no 7672492
chr4 88480400 rs76185490 T A no 7672493
chr4 88480421 rs149878737 T C
ATF4 ATF7 BATF3 CREB1 JDP2 JUN JUND
7672494
Genes possibly regulated by vista45347[chr4:88480312-88480555]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr4 88394487 88452213 - SPARCL1 ENSG00000152583.8 88452213 0.88 1.0 4853 71901
chr4 88529681 88538062 + DSPP ENSG00000152591.8 88529681 0.89 0.96 4854 50874
chr4 88571459 88585513 + DMP1 ENSG00000152592.9 88571459 0.97 0.99 4855 9096
Expression level of Genes
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miRNAs possibly regulated by vista45347[chr4:88480312-88480555]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results