EnhancerDB
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  3. vista45349[chr4:88670885-88671377]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista45349[chr4:88670885-88671377]
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Tissue distribution of vista45349
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Transcription factor that possibly regulate vista45349[chr4:88670885-88671377]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr4 88670887 88670902 MEF2A JASPAR yes 49256322
chr4 88670888 88670903 MEF2C JASPAR yes 49256323
chr4 88670889 88670901 MEF2B JASPAR yes 49256324
chr4 88670934 88670946 TEAD1 JASPAR yes 49256325
chr4 88670936 88670946 TEAD1 JASPAR yes 49256326
chr4 88670936 88670946 TEAD4 JASPAR yes 49256327
chr4 88670937 88670945 TEAD3 JASPAR yes 49256328
chr4 88670975 88670979 YY1 TRANSFAC yes 49256329
chr4 88670980 88670985 GATA2 JASPAR yes 49256330
chr4 88670986 88670992 LEF1 TRANSFAC yes 49256331
chr4 88670986 88670992 SOX10 JASPAR yes 49256332
chr4 88670991 88670994 MYB TRANSFAC yes 49256333
chr4 88671001 88671005 YY1 TRANSFAC yes 49256334
chr4 88671010 88671023 ZBED1 JASPAR yes 49256335
chr4 88671023 88671026 MYB TRANSFAC yes 49256336
chr4 88671049 88671063 TCF7L2 JASPAR yes 49256337
chr4 88671054 88671060 SOX10 JASPAR yes 49256338
chr4 88671062 88671083 IRF1 JASPAR yes 49256339
chr4 88671066 88671080 STAT1 JASPAR yes 49256340
chr4 88671066 88671081 STAT2 JASPAR yes 49256341
chr4 88671067 88671079 IRF1 JASPAR yes 49256342
chr4 88671078 88671082 YY1 TRANSFAC yes 49256343
chr4 88671081 88671093 GLI2 JASPAR yes 49256344
chr4 88671081 88671093 ZBTB7B JASPAR yes 49256345
chr4 88671081 88671093 ZBTB7C JASPAR yes 49256346
chr4 88671101 88671109 CREB1 JASPAR yes 49256347
chr4 88671101 88671115 NR2F1 JASPAR yes 49256348
chr4 88671114 88671118 H4TF2 TRANSFAC yes 49256349
chr4 88671143 88671157 FOXF2 JASPAR yes 49256350
chr4 88671143 88671158 FOXP1 JASPAR yes 49256351
chr4 88671144 88671155 FOXA1 JASPAR yes 49256352
chr4 88671144 88671159 FOXA1 JASPAR yes 49256353
chr4 88671145 88671157 FOXC2 JASPAR yes 49256354
chr4 88671146 88671157 FOXP2 JASPAR yes 49256355
chr4 88671146 88671158 FOXI1 JASPAR yes 49256356
chr4 88671148 88671156 FOXG1 JASPAR yes 49256357
chr4 88671150 88671156 HiNF-A TRANSFAC yes 49256358
chr4 88671150 88671160 MAX JASPAR yes 49256359
chr4 88671150 88671162 HES5 JASPAR yes 49256360
chr4 88671151 88671161 CLOCK JASPAR yes 49256361
chr4 88671151 88671161 NEUROG2 JASPAR yes 49256362
chr4 88671153 88671170 ZNF410 JASPAR yes 49256363
chr4 88671158 88671164 YY1 JASPAR yes 49256364
chr4 88671170 88671186 POU4F2 JASPAR yes 49256365
chr4 88671170 88671186 POU4F3 JASPAR yes 49256366
chr4 88671172 88671180 HOXA5 JASPAR yes 49256367
chr4 88671172 88671186 POU4F1 JASPAR yes 49256368
chr4 88671173 88671183 EVX2 JASPAR yes 49256369
chr4 88671173 88671183 LHX2 JASPAR yes 49256370
chr4 88671173 88671183 MEOX1 JASPAR yes 49256371
chr4 88671173 88671183 MEOX2 JASPAR yes 49256372
chr4 88671173 88671183 NOTO JASPAR yes 49256373
chr4 88671173 88671183 POU6F1 JASPAR yes 49256374
chr4 88671174 88671182 LBX1 JASPAR yes 49256375
chr4 88671174 88671182 PDX1 JASPAR yes 49256376
chr4 88671174 88671182 VAX1 JASPAR yes 49256377
chr4 88671174 88671182 VAX2 JASPAR yes 49256378
chr4 88671174 88671182 VSX1 JASPAR yes 49256379
chr4 88671174 88671182 VSX2 JASPAR yes 49256380
chr4 88671210 88671225 MEF2C JASPAR yes 49256381
chr4 88671211 88671226 MEF2A JASPAR yes 49256382
chr4 88671215 88671230 SOX21 JASPAR yes 49256383
chr4 88671215 88671231 SOX4 JASPAR yes 49256384
chr4 88671232 88671250 NR3C1 JASPAR yes 49256385
chr4 88671233 88671248 AR JASPAR yes 49256386
chr4 88671262 88671280 SRF JASPAR yes 49256387
chr4 88671265 88671279 RORA JASPAR yes 49256388
chr4 88671273 88671277 ESR1 TRANSFAC yes 49256389
chr4 88671276 88671291 HNF4G JASPAR yes 49256390
chr4 88671276 88671291 NR2C2 JASPAR yes 49256391
chr4 88671277 88671291 NR2F1 JASPAR yes 49256392
chr4 88671277 88671291 RXRB JASPAR yes 49256393
chr4 88671277 88671291 RXRG JASPAR yes 49256394
chr4 88671277 88671292 HNF4A JASPAR yes 49256395
chr4 88671299 88671309 SREBF1 JASPAR yes 49256396
chr4 88671300 88671308 MGA JASPAR yes 49256397
chr4 88671307 88671313 GATA3 JASPAR yes 49256398
chr4 88671312 88671322 MAX JASPAR yes 49256399
chr4 88671322 88671326 H1TF2 TRANSFAC yes 49256400
chr4 88671322 88671326 NFE TRANSFAC yes 49256401
chr4 88671322 88671326 SRF TRANSFAC yes 49256402
chr4 88671340 88671354 MTF1 JASPAR yes 49256403
chr4 88671346 88671367 ZNF263 JASPAR yes 49256404
chr4 88671353 88671358 ETS2 TRANSFAC yes 49256405
SNP sites on vista45349[chr4:88670885-88671377]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr4 88670924 rs34884248 CA C no 7672992
chr4 88670924 rs398092588 CA C no 7672993
chr4 88670930 rs74938372 C T no 7672994
chr4 88670949 rs17013031 G A no 7672995
chr4 88670997 rs115483723 T A,G no 7672996
chr4 88671018 rs548842074 C T
ZBED1
7672997
chr4 88671019 rs114522655 G A
ZBED1
7672998
chr4 88671028 rs115878871 T A no 7672999
chr4 88671074 rs17013033 A G
IRF1 STAT1 STAT2
7673000
chr4 88671093 rs17013036 T C
GLI2 ZBTB7B ZBTB7C
7673001
chr4 88671115 rs148893319 G C,T
H4TF2 NR2F1
7673002
chr4 88671147 rs17013037 A G
FOXA1 FOXC2 FOXF2 FOXI1 FOXP1 FOXP2
7673003
chr4 88671174 rs374676333 A G
EVX2 HOXA5 LBX1 LHX2 MEOX1 MEOX2 NOTO PDX1 POU4F1 POU4F2 POU4F3 POU6F1 VAX1 VAX2 VSX1 VSX2
7673004
Genes possibly regulated by vista45349[chr4:88670885-88671377]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr4 88571459 88585513 + DMP1 ENSG00000152592.9 88571459 0.97 0.99 4855 574
chr4 88720733 88733074 + IBSP ENSG00000029559.5 88720733 0.94 1.0 4856 50644
chr4 88742563 88767969 + MEPE ENSG00000152595.12 88742563 0.93 1.0 4857 28814
Expression level of Genes
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miRNAs possibly regulated by vista45349[chr4:88670885-88671377]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results