EnhancerDB
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  3. vista45363[chr4:89212160-89212449]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista45363[chr4:89212160-89212449]
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Tissue distribution of vista45363
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Transcription factor that possibly regulate vista45363[chr4:89212160-89212449]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr4 89212200 89212210 HOXA13 JASPAR yes 49257060
chr4 89212217 89212234 ESR1 JASPAR yes 49257061
chr4 89212221 89212229 SF1 TRANSFAC yes 49257062
chr4 89212227 89212230 MYB TRANSFAC yes 49257063
chr4 89212261 89212280 RFX2 JASPAR yes 49257064
chr4 89212263 89212278 RFX5 JASPAR yes 49257065
chr4 89212292 89212298 HiNF-A TRANSFAC yes 49257066
chr4 89212305 89212309 YY1 TRANSFAC yes 49257067
chr4 89212340 89212356 NFYA JASPAR yes 49257068
chr4 89212343 89212358 NFYB JASPAR yes 49257069
chr4 89212349 89212353 ESR1 TRANSFAC yes 49257070
chr4 89212349 89212370 IRF1 JASPAR yes 49257071
chr4 89212351 89212366 PRDM1 JASPAR yes 49257072
chr4 89212351 89212366 STAT2 JASPAR yes 49257073
chr4 89212352 89212366 STAT1 JASPAR yes 49257074
chr4 89212353 89212368 IRF9 JASPAR yes 49257075
chr4 89212363 89212367 H1TF2 TRANSFAC yes 49257076
chr4 89212363 89212367 NFE TRANSFAC yes 49257077
chr4 89212363 89212367 SRF TRANSFAC yes 49257078
chr4 89212366 89212387 IRF1 JASPAR yes 49257079
chr4 89212370 89212384 STAT1 JASPAR yes 49257080
chr4 89212370 89212385 PRDM1 JASPAR yes 49257081
chr4 89212370 89212385 STAT2 JASPAR yes 49257082
chr4 89212384 89212394 NFAT4 TRANSFAC yes 49257083
chr4 89212385 89212389 YY1 TRANSFAC yes 49257084
chr4 89212387 89212397 NFATC3 JASPAR yes 49257085
chr4 89212388 89212395 NFATC2 JASPAR yes 49257086
chr4 89212388 89212402 E2F7 JASPAR yes 49257087
chr4 89212395 89212405 EN2 JASPAR yes 49257088
chr4 89212395 89212405 ESX1 JASPAR yes 49257089
chr4 89212395 89212405 GBX1 JASPAR yes 49257090
chr4 89212395 89212405 GBX2 JASPAR yes 49257091
chr4 89212395 89212405 HESX1 JASPAR yes 49257092
chr4 89212395 89212405 LBX2 JASPAR yes 49257093
chr4 89212395 89212405 LHX2 JASPAR yes 49257094
chr4 89212395 89212405 MIXL1 JASPAR yes 49257095
chr4 89212395 89212405 RAX JASPAR yes 49257096
chr4 89212396 89212404 LHX9 JASPAR yes 49257097
chr4 89212396 89212404 SHOX JASPAR yes 49257098
chr4 89212396 89212410 POU1F1 JASPAR yes 49257099
chr4 89212412 89212426 STAT1 JASPAR yes 49257100
chr4 89212416 89212421 ETS2 TRANSFAC yes 49257101
SNP sites on vista45363[chr4:89212160-89212449]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr4 89212182 rs140312343 C T no 7675945
chr4 89212274 rs144483978 A G
RFX2 RFX5
7675946
Genes possibly regulated by vista45363[chr4:89212160-89212449]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr4 89011416 89152474 - ABCG2 ENSG00000118777.6 89152474 0.87 0.94 4860 40314
chr4 89178772 89205921 - PPM1K ENSG00000163644.10 89205921 0.76 0.98 4861 93761
chr4 89299891 89364263 + HERC6 ENSG00000138642.10 89299891 0.76 1.0 4862 12558
Expression level of Genes
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miRNAs possibly regulated by vista45363[chr4:89212160-89212449]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results