EnhancerDB
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  3. vista45369[chr4:89377235-89377564]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista45369[chr4:89377235-89377564]
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Tissue distribution of vista45369
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Transcription factor that possibly regulate vista45369[chr4:89377235-89377564]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr4 89377236 89377251 NR2C2 JASPAR yes 49257371
chr4 89377237 89377251 PLAG1 JASPAR yes 49257372
chr4 89377237 89377251 RXRB JASPAR yes 49257373
chr4 89377237 89377251 RXRG JASPAR yes 49257374
chr4 89377239 89377243 LFA1 TRANSFAC yes 49257375
chr4 89377241 89377255 SPI1 JASPAR yes 49257376
chr4 89377241 89377255 SPIC JASPAR yes 49257377
chr4 89377247 89377252 ETS2 TRANSFAC yes 49257378
chr4 89377297 89377309 FOXC2 JASPAR yes 49257379
chr4 89377298 89377303 GATA2 JASPAR yes 49257380
chr4 89377346 89377349 MYB TRANSFAC yes 49257381
chr4 89377352 89377362 PAX7 JASPAR yes 49257382
chr4 89377354 89377368 POU4F1 JASPAR yes 49257383
chr4 89377354 89377370 POU4F2 JASPAR yes 49257384
chr4 89377354 89377370 POU4F3 JASPAR yes 49257385
chr4 89377355 89377371 POU4F3 JASPAR yes 49257386
chr4 89377357 89377371 POU4F1 JASPAR yes 49257387
chr4 89377357 89377372 HNF1A JASPAR yes 49257388
chr4 89377358 89377371 HNF1B JASPAR yes 49257389
chr4 89377360 89377370 POU6F2 JASPAR yes 49257390
chr4 89377361 89377371 ALX3 JASPAR yes 49257391
chr4 89377361 89377371 EMX2 JASPAR yes 49257392
chr4 89377361 89377371 ESX1 JASPAR yes 49257393
chr4 89377361 89377371 GBX2 JASPAR yes 49257394
chr4 89377361 89377371 GSX1 JASPAR yes 49257395
chr4 89377361 89377371 GSX2 JASPAR yes 49257396
chr4 89377361 89377371 HESX1 JASPAR yes 49257397
chr4 89377361 89377371 HOXB2 JASPAR yes 49257398
chr4 89377361 89377371 HOXB3 JASPAR yes 49257399
chr4 89377361 89377371 LBX2 JASPAR yes 49257400
chr4 89377361 89377371 LHX2 JASPAR yes 49257401
chr4 89377361 89377371 LHX6 JASPAR yes 49257402
chr4 89377361 89377371 MEOX1 JASPAR yes 49257403
chr4 89377361 89377371 MEOX2 JASPAR yes 49257404
chr4 89377361 89377371 MIXL1 JASPAR yes 49257405
chr4 89377361 89377371 MNX1 JASPAR yes 49257406
chr4 89377361 89377371 NOTO JASPAR yes 49257407
chr4 89377361 89377371 POU6F1 JASPAR yes 49257408
chr4 89377361 89377371 RAX JASPAR yes 49257409
chr4 89377362 89377370 BSX JASPAR yes 49257410
chr4 89377362 89377370 DLX6 JASPAR yes 49257411
chr4 89377362 89377370 EN1 JASPAR yes 49257412
chr4 89377362 89377370 ISX JASPAR yes 49257413
chr4 89377362 89377370 LBX1 JASPAR yes 49257414
chr4 89377362 89377370 LHX9 JASPAR yes 49257415
chr4 89377362 89377370 LMX1A JASPAR yes 49257416
chr4 89377362 89377370 LMX1B JASPAR yes 49257417
chr4 89377362 89377370 NKX6-1 JASPAR yes 49257418
chr4 89377362 89377370 NKX6-2 JASPAR yes 49257419
chr4 89377362 89377370 PAX4 JASPAR yes 49257420
chr4 89377362 89377370 PDX1 JASPAR yes 49257421
chr4 89377362 89377370 PRRX1 JASPAR yes 49257422
chr4 89377362 89377370 RAX2 JASPAR yes 49257423
chr4 89377362 89377370 SHOX JASPAR yes 49257424
chr4 89377362 89377370 UNCX JASPAR yes 49257425
chr4 89377362 89377370 VAX1 JASPAR yes 49257426
chr4 89377362 89377370 VAX2 JASPAR yes 49257427
chr4 89377362 89377370 VSX1 JASPAR yes 49257428
chr4 89377362 89377370 VSX2 JASPAR yes 49257429
chr4 89377362 89377372 HOXB13 JASPAR yes 49257430
chr4 89377362 89377372 HOXD13 JASPAR yes 49257431
chr4 89377368 89377374 HiNF-A TRANSFAC yes 49257432
chr4 89377406 89377412 TBP TRANSFAC yes 49257433
chr4 89377447 89377465 SRF JASPAR yes 49257434
chr4 89377453 89377459 TBP TRANSFAC yes 49257435
chr4 89377473 89377492 RFX2 JASPAR yes 49257436
chr4 89377475 89377490 RFX5 JASPAR yes 49257437
chr4 89377515 89377524 HIC2 JASPAR yes 49257438
chr4 89377517 89377538 ZNF263 JASPAR yes 49257439
chr4 89377518 89377522 LFA1 TRANSFAC yes 49257440
chr4 89377520 89377534 GLIS2 JASPAR yes 49257441
chr4 89377522 89377542 RREB1 JASPAR yes 49257442
chr4 89377523 89377543 RREB1 JASPAR yes 49257443
chr4 89377524 89377534 ZNF740 JASPAR yes 49257444
chr4 89377524 89377544 RREB1 JASPAR yes 49257445
chr4 89377525 89377545 RREB1 JASPAR yes 49257446
chr4 89377526 89377536 SP1 JASPAR yes 49257447
chr4 89377527 89377537 SP1 JASPAR yes 49257448
chr4 89377527 89377548 ZNF263 JASPAR yes 49257449
chr4 89377528 89377548 RREB1 JASPAR yes 49257450
chr4 89377529 89377549 RREB1 JASPAR yes 49257451
chr4 89377530 89377535 SP1 TRANSFAC yes 49257452
chr4 89377530 89377550 RREB1 JASPAR yes 49257453
chr4 89377531 89377541 ZNF740 JASPAR yes 49257454
chr4 89377531 89377551 RREB1 JASPAR yes 49257455
chr4 89377532 89377552 RREB1 JASPAR yes 49257456
chr4 89377533 89377543 SP1 JASPAR yes 49257457
chr4 89377533 89377554 ZNF263 JASPAR yes 49257458
chr4 89377534 89377554 RREB1 JASPAR yes 49257459
chr4 89377535 89377555 RREB1 JASPAR yes 49257460
chr4 89377536 89377541 SP1 TRANSFAC yes 49257461
chr4 89377536 89377556 RREB1 JASPAR yes 49257462
chr4 89377536 89377557 ZNF263 JASPAR yes 49257463
chr4 89377537 89377557 RREB1 JASPAR yes 49257464
chr4 89377538 89377558 RREB1 JASPAR yes 49257465
chr4 89377539 89377560 ZNF263 JASPAR yes 49257466
chr4 89377540 89377560 RREB1 JASPAR yes 49257467
chr4 89377540 89377561 ZNF263 JASPAR yes 49257468
chr4 89377541 89377561 RREB1 JASPAR yes 49257469
chr4 89377547 89377564 RXRA JASPAR yes 49257470
chr4 89377548 89377553 SP1 TRANSFAC yes 49257471
chr4 89377548 89377558 ZNF740 JASPAR yes 49257472
chr4 89377549 89377559 ZNF740 JASPAR yes 49257473
chr4 89377552 89377562 SP1 JASPAR yes 49257474
chr4 89377553 89377563 SP1 JASPAR yes 49257475
chr4 89377555 89377561 MAZ TRANSFAC yes 49257476
SNP sites on vista45369[chr4:89377235-89377564]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr4 89377262 rs147649544 T C no 7676670
chr4 89377346 rs531303660 A G
MYB
7676671
chr4 89377363 rs145752002 CTAAT C
ALX3 BSX DLX6 EMX2 EN1 ESX1 GBX2 GSX1 GSX2 HESX1 HNF1A HNF1B HOXB13 HOXB2 HOXB3 HOXD13 ISX LBX1 LBX2 LHX2 LHX6 LHX9 LMX1A LMX1B MEOX1 MEOX2 MIXL1 MNX1 NKX6-1 NKX6-2 NOTO PAX4 PDX1 POU4F1 POU4F2 POU4F3 POU6F1 POU6F2 PRRX1 RAX RAX2 SHOX UNCX VAX1 VAX2 VSX1 VSX2
7676672
chr4 89377482 rs192692669 G A,C
RFX2 RFX5
7676673
chr4 89377506 rs78300932 T C no 7676674
Genes possibly regulated by vista45369[chr4:89377235-89377564]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr4 89299891 89364263 + HERC6 ENSG00000138642.10 89299891 0.76 1.0 4862 22656
chr4 89378268 89427314 + HERC5 ENSG00000138646.4 89378268 0.76 1.0 4863 99296
chr4 89442136 89444964 - PYURF ENSG00000145337.4 89444964 0.79 0.99 4864 32600
chr4 89442199 89629693 + HERC3 ENSG00000138641.11 89442199 0.77 1.0 4865 35365
chr4 89442724 89442940 - PIGY ENSG00000255072.1 89442940 0.91 0.95 4866 34624
Expression level of Genes
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miRNAs possibly regulated by vista45369[chr4:89377235-89377564]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results