EnhancerDB
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  3. vista45372[chr4:89453548-89453843]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista45372[chr4:89453548-89453843]
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Tissue distribution of vista45372
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Transcription factor that possibly regulate vista45372[chr4:89453548-89453843]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr4 89453545 89453556 GCM1 JASPAR yes 49257551
chr4 89453545 89453556 GCM1 JASPAR yes 91171938
chr4 89453551 89453556 GATA1 TRANSFAC yes 49257552
chr4 89453551 89453556 GATA1 TRANSFAC yes 91171939
chr4 89453556 89453565 THAP1 JASPAR yes 49257553
chr4 89453556 89453565 THAP1 JASPAR yes 91171940
chr4 89453559 89453563 LFA1 TRANSFAC yes 49257554
chr4 89453559 89453563 LFA1 TRANSFAC yes 91171941
chr4 89453579 89453583 NFE TRANSFAC yes 49257555
chr4 89453579 89453583 NFE TRANSFAC yes 91171942
chr4 89453609 89453619 SP1 JASPAR yes 49257556
chr4 89453609 89453619 SP1 JASPAR yes 91171943
chr4 89453610 89453618 EHF JASPAR yes 49257557
chr4 89453610 89453618 EHF JASPAR yes 91171944
chr4 89453610 89453631 ZNF263 JASPAR yes 49257558
chr4 89453610 89453631 ZNF263 JASPAR yes 91171945
chr4 89453648 89453653 NFY TRANSFAC yes 49257559
chr4 89453648 89453653 NFY TRANSFAC yes 91171946
chr4 89453700 89453704 TEAD2 TRANSFAC yes 49257560
chr4 89453700 89453704 TEAD2 TRANSFAC yes 91171947
chr4 89453700 89453705 TBP TRANSFAC yes 49257561
chr4 89453700 89453705 TBP TRANSFAC yes 91171948
chr4 89453700 89453706 TMF TRANSFAC yes 49257562
chr4 89453700 89453706 TMF TRANSFAC yes 91171949
chr4 89453713 89453723 GSC JASPAR yes 49257563
chr4 89453713 89453723 GSC JASPAR yes 91171950
chr4 89453721 89453736 HSF1 JASPAR yes 49257564
chr4 89453721 89453736 HSF1 JASPAR yes 91171951
chr4 89453742 89453754 FOXI1 JASPAR yes 49257565
chr4 89453742 89453754 FOXI1 JASPAR yes 91171952
chr4 89453746 89453752 HiNF-A TRANSFAC yes 49257566
chr4 89453746 89453752 HiNF-A TRANSFAC yes 91171953
chr4 89453768 89453778 HMBOX1 JASPAR yes 49257567
chr4 89453768 89453778 HMBOX1 JASPAR yes 91171954
chr4 89453770 89453773 MYB TRANSFAC yes 49257568
chr4 89453770 89453773 MYB TRANSFAC yes 91171955
chr4 89453812 89453815 MYB TRANSFAC yes 49257569
chr4 89453812 89453815 MYB TRANSFAC yes 91171956
chr4 89453829 89453833 YY1 TRANSFAC yes 49257570
chr4 89453829 89453833 YY1 TRANSFAC yes 91171957
chr4 89453832 89453836 TEAD2 TRANSFAC yes 49257571
chr4 89453832 89453836 TEAD2 TRANSFAC yes 91171958
chr4 89453834 89453849 FOXP1 JASPAR yes 49257572
chr4 89453834 89453849 FOXP1 JASPAR yes 91171959
chr4 89453834 89453855 IRF1 JASPAR yes 49257573
chr4 89453834 89453855 IRF1 JASPAR yes 91171960
chr4 89453838 89453853 PRDM1 JASPAR yes 49257574
chr4 89453838 89453853 PRDM1 JASPAR yes 91171961
chr4 89453839 89453851 IRF1 JASPAR yes 49257575
chr4 89453839 89453851 IRF1 JASPAR yes 91171962
SNP sites on vista45372[chr4:89453548-89453843]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr4 89453567 rs185414765 G A no 7676791
chr4 89453654 rs3886891 G C no 7676792
chr4 89453816 rs189494967 C T no 7676793
Genes possibly regulated by vista45372[chr4:89453548-89453843]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr4 89378268 89427314 + HERC5 ENSG00000138646.4 89378268 0.76 1.0 4863 24720
chr4 89442136 89444964 - PYURF ENSG00000145337.4 89444964 0.79 0.99 4864 91416
chr4 89442199 89629693 + HERC3 ENSG00000138641.11 89442199 0.77 1.0 4865 88651
chr4 89442724 89442940 - PIGY ENSG00000255072.1 89442940 0.91 0.95 4866 89392
Expression level of Genes
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miRNAs possibly regulated by vista45372[chr4:89453548-89453843]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results