EnhancerDB
  1. Home
  2. Enhancers
  3. vista4538[chr1:201139670-201140154]
View enhancers around input chromosomal region
Back to top

Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista4538[chr1:201139670-201140154]
Back to top
Tissue distribution of vista4538
Back to top
Transcription factor that possibly regulate vista4538[chr1:201139670-201140154]
Back to top
Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr1 201139531 201140071 EP300 UCSC Txn Factor no Conserved 107855894
chr1 201139545 201140283 TCF7L2 UCSC Txn Factor no Conserved 107855900
chr1 201139615 201139989 CEBPB UCSC Txn Factor no Conserved 107855917
chr1 201139648 201140032 RCOR1 UCSC Txn Factor no Conserved 107855921
chr1 201139677 201139969 NR2F2 UCSC Txn Factor no Conserved 107855926
chr1 201139693 201139917 TEAD4 UCSC Txn Factor no Conserved 107855932
chr1 201139700 201139977 FOXA1 UCSC Txn Factor no Conserved 107855937
chr1 201139700 201140654 E2F1 UCSC Txn Factor no Conserved 107855939
chr1 201139710 201139937 FOXA2 UCSC Txn Factor no Conserved 107855941
chr1 201139717 201140111 MYC UCSC Txn Factor no Conserved 107855945
chr1 201139748 201140877 POLR2A UCSC Txn Factor no Conserved 107855956
chr1 201139844 201140504 TFAP2C UCSC Txn Factor no Conserved 107855983
chr1 201139872 201140520 TFAP2A UCSC Txn Factor no Conserved 107855994
chr1 201139913 201140582 CTCF UCSC Txn Factor no Conserved 107856001
chr1 201139982 201140356 PHF8 UCSC Txn Factor no Conserved 107856013
chr1 201139686 201139700 EBF1 JASPAR yes 118431253
chr1 201139694 201139707 SMAD2 JASPAR yes 118431254
chr1 201139737 201139747 ETV3 JASPAR yes 118431255
chr1 201139747 201139759 PKNOX2 JASPAR yes 118431256
chr1 201139779 201139789 POU6F2 JASPAR yes 118431257
chr1 201139780 201139790 EMX1 JASPAR yes 118431258
chr1 201139780 201139790 HOXB3 JASPAR yes 118431259
chr1 201139780 201139790 NOTO JASPAR yes 118431260
chr1 201139781 201139789 NKX6-1 JASPAR yes 118431261
chr1 201139781 201139789 NKX6-2 JASPAR yes 118431262
chr1 201139783 201139787 YY1 TRANSFAC yes 118431263
chr1 201139798 201139813 PRDM1 JASPAR yes 118431264
chr1 201139809 201139824 HNF1A JASPAR yes 118431265
chr1 201139810 201139822 HNF1B JASPAR yes 118431266
chr1 201139810 201139823 HNF1B JASPAR yes 118431267
chr1 201139816 201139820 YY1 TRANSFAC yes 118431268
chr1 201139829 201139844 HNF4G JASPAR yes 118431269
chr1 201139830 201139845 HNF4A JASPAR yes 118431270
chr1 201139839 201139843 LFA1 TRANSFAC yes 118431271
chr1 201139844 201139855 FOXH1 JASPAR yes 118431272
chr1 201139848 201139859 CEBPB JASPAR yes 118431273
chr1 201139848 201139861 ATF4 JASPAR yes 118431274
chr1 201139866 201139884 ESR1 JASPAR yes 118431275
chr1 201139891 201139896 ETS2 TRANSFAC yes 118431276
chr1 201139926 201139933 SP1 TRANSFAC yes 118431277
chr1 201139928 201139933 SP1 TRANSFAC yes 118431278
chr1 201139936 201139945 SP1 TRANSFAC yes 118431279
chr1 201139937 201139947 SP1 JASPAR yes 118431280
chr1 201139937 201139956 CTCF JASPAR yes 118431281
chr1 201139942 201139957 RFX5 JASPAR yes 118431282
chr1 201139970 201139974 H1TF2 TRANSFAC yes 118431283
chr1 201139970 201139974 NFE TRANSFAC yes 118431284
chr1 201139970 201139974 SRF TRANSFAC yes 118431285
chr1 201139971 201139985 BATF3 JASPAR yes 118431286
chr1 201140000 201140013 TFAP2B JASPAR yes 118431287
chr1 201140000 201140013 TFAP2C JASPAR yes 118431288
chr1 201140021 201140025 H4TF2 TRANSFAC yes 118431289
chr1 201140027 201140042 ZIC4 JASPAR yes 118431290
chr1 201140030 201140041 TFAP2A JASPAR yes 118431291
chr1 201140030 201140041 TFAP2B JASPAR yes 118431292
chr1 201140030 201140041 TFAP2C JASPAR yes 118431293
chr1 201140031 201140040 TFAP2A JASPAR yes 118431294
chr1 201140050 201140064 GLIS2 JASPAR yes 118431295
chr1 201140050 201140064 GLIS3 JASPAR yes 118431296
chr1 201140083 201140087 YY1 TRANSFAC yes 118431297
chr1 201140095 201140114 CTCF JASPAR yes 118431298
chr1 201140100 201140109 SNAI2 JASPAR yes 118431299
chr1 201140100 201140110 FIGLA JASPAR yes 118431300
chr1 201140100 201140110 ID4 JASPAR yes 118431301
chr1 201140100 201140110 MSC JASPAR yes 118431302
chr1 201140100 201140110 MYF6 JASPAR yes 118431303
chr1 201140100 201140110 TCF3 JASPAR yes 118431304
chr1 201140100 201140110 TCF4 JASPAR yes 118431305
chr1 201140103 201140111 MGA JASPAR yes 118431306
chr1 201140103 201140111 TBX15 JASPAR yes 118431307
chr1 201140103 201140111 TBX1 JASPAR yes 118431308
chr1 201140103 201140111 TBX4 JASPAR yes 118431309
chr1 201140103 201140111 TBX5 JASPAR yes 118431310
chr1 201140113 201140119 JUN TRANSFAC yes 118431311
SNP sites on vista4538[chr1:201139670-201140154]
Back to top
chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr1 201139696 rs535454971 G A
CEBPB EBF1 EP300 NR2F2 RCOR1 SMAD2 TCF7L2 TEAD4
851420
chr1 201139858 rs79234775 A T
ATF4 CEBPB E2F1 EP300 FOXA1 FOXA2 MYC NR2F2 POLR2A RCOR1 TCF7L2 TEAD4 TFAP2C
851421
chr1 201139864 rs6413917 G A
CEBPB E2F1 EP300 FOXA1 FOXA2 MYC NR2F2 POLR2A RCOR1 TCF7L2 TEAD4 TFAP2C
851422
chr1 201139965 rs188559916 A G
CEBPB CTCF E2F1 EP300 FOXA1 MYC NR2F2 POLR2A RCOR1 TCF7L2 TFAP2A TFAP2C
851423
chr1 201139998 rs557465712 T G
CTCF E2F1 EP300 MYC PHF8 POLR2A RCOR1 TCF7L2 TFAP2A TFAP2C
851424
chr1 201140002 rs577395342 C T
CTCF E2F1 EP300 MYC PHF8 POLR2A RCOR1 TCF7L2 TFAP2A TFAP2B TFAP2C
851425
chr1 201140123 rs562874517 T C
CTCF E2F1 PHF8 POLR2A TCF7L2 TFAP2A TFAP2C
851426
Genes possibly regulated by vista4538[chr1:201139670-201140154]
Back to top
Details of Genes
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr1 201008642 201081694 - CACNA1S ENSG00000081248.6 201081694 0.99 1.0 1699 42024
chr1 201083081 201096312 - ASCL5 ENSG00000232237.2 201096312 0.93 0.99 1700 56642
chr1 201103900 201140702 - TMEM9 ENSG00000116857.12 201140702 0.77 1.0 1701 99452
chr1 201159953 201198080 + IGFN1 ENSG00000163395.12 201159953 0.99 1.0 1702 80201
Expression level of Genes
Back to top
miRNAs possibly regulated by vista4538[chr1:201139670-201140154]
Back to top
Details of miRNAs
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
Back to top
No results