EnhancerDB
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  3. vista45388[chr4:90215736-90216024]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista45388[chr4:90215736-90216024]
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Tissue distribution of vista45388
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Transcription factor that possibly regulate vista45388[chr4:90215736-90216024]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr4 90215756 90215761 MYB TRANSFAC yes 49258422
chr4 90215756 90215761 MYB TRANSFAC yes 91225618
chr4 90215763 90215770 NKX3-1 JASPAR yes 49258423
chr4 90215763 90215770 NKX3-1 JASPAR yes 91225619
chr4 90215776 90215780 YY1 TRANSFAC yes 49258424
chr4 90215776 90215780 YY1 TRANSFAC yes 91225620
chr4 90215781 90215792 ELK4 JASPAR yes 49258425
chr4 90215781 90215792 FLI1 JASPAR yes 49258426
chr4 90215781 90215792 ELK4 JASPAR yes 91225621
chr4 90215781 90215792 FLI1 JASPAR yes 91225622
chr4 90215782 90215792 GABPA JASPAR yes 49258427
chr4 90215782 90215792 GABPA JASPAR yes 91225623
chr4 90215782 90215793 ELF5 JASPAR yes 49258428
chr4 90215782 90215793 ETV2 JASPAR yes 49258429
chr4 90215782 90215793 ELF5 JASPAR yes 91225624
chr4 90215782 90215793 ETV2 JASPAR yes 91225625
chr4 90215782 90215795 ELF1 JASPAR yes 49258430
chr4 90215782 90215795 ELF1 JASPAR yes 91225626
chr4 90215782 90215796 SPI1 JASPAR yes 49258431
chr4 90215782 90215796 SPIC JASPAR yes 49258432
chr4 90215782 90215796 SPI1 JASPAR yes 91225627
chr4 90215782 90215796 SPIC JASPAR yes 91225628
chr4 90215808 90215827 PAX5 JASPAR yes 49258433
chr4 90215808 90215827 PAX5 JASPAR yes 91225629
chr4 90215822 90215833 FOXA1 JASPAR yes 49258434
chr4 90215822 90215833 FOXA1 JASPAR yes 91225630
chr4 90215822 90215837 FOXA1 JASPAR yes 49258435
chr4 90215822 90215837 FOXA1 JASPAR yes 91225631
chr4 90215823 90215835 FOXC2 JASPAR yes 49258436
chr4 90215823 90215835 FOXC2 JASPAR yes 91225632
chr4 90215829 90215849 RREB1 JASPAR yes 49258437
chr4 90215829 90215849 RREB1 JASPAR yes 91225633
chr4 90215830 90215845 RUNX2 JASPAR yes 49258438
chr4 90215830 90215845 RUNX2 JASPAR yes 91225634
chr4 90215831 90215840 RUNX2 JASPAR yes 49258439
chr4 90215831 90215840 RUNX2 JASPAR yes 91225635
chr4 90215831 90215841 RUNX3 JASPAR yes 49258440
chr4 90215831 90215841 RUNX3 JASPAR yes 91225636
chr4 90215904 90215909 GATA2 JASPAR yes 49258441
chr4 90215904 90215909 GATA2 JASPAR yes 91225637
chr4 90215934 90215951 BCL6B JASPAR yes 49258442
chr4 90215934 90215951 BCL6B JASPAR yes 91225638
chr4 90215936 90215944 HOXA5 JASPAR yes 49258443
chr4 90215936 90215944 HOXA5 JASPAR yes 91225639
chr4 90215965 90215972 JUN TRANSFAC yes 49258444
chr4 90215965 90215972 JUN TRANSFAC yes 91225640
chr4 90215966 90215983 ZNF410 JASPAR yes 49258445
chr4 90215966 90215983 ZNF410 JASPAR yes 91225641
chr4 90215973 90215983 BARHL2 JASPAR yes 49258446
chr4 90215973 90215983 BARHL2 JASPAR yes 91225642
chr4 90215995 90216003 FOXC1 JASPAR yes 49258447
chr4 90215995 90216003 FOXC1 JASPAR yes 91225643
chr4 90216006 90216015 NKX2-8 JASPAR yes 49258448
chr4 90216006 90216015 NKX2-8 JASPAR yes 91225644
chr4 90216006 90216016 NKX2-3 JASPAR yes 49258449
chr4 90216006 90216016 NKX2-3 JASPAR yes 91225645
SNP sites on vista45388[chr4:90215736-90216024]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr4 90215801 rs76003016 A C no 7681251
chr4 90215951 rs151023108 A T
BCL6B
7681252
Genes possibly regulated by vista45388[chr4:90215736-90216024]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr4 90157537 90229161 - GPRIN3 ENSG00000185477.4 90229161 0.85 0.91 4870 86863
Expression level of Genes
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miRNAs possibly regulated by vista45388[chr4:90215736-90216024]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results