EnhancerDB
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  3. vista45389[chr4:90220005-90220418]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista45389[chr4:90220005-90220418]
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Tissue distribution of vista45389
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Transcription factor that possibly regulate vista45389[chr4:90220005-90220418]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr4 90220036 90220039 MYB TRANSFAC yes 49258450
chr4 90220036 90220039 MYB TRANSFAC yes 91226301
chr4 90220036 90220051 NR2C2 JASPAR yes 49258451
chr4 90220036 90220051 NR2C2 JASPAR yes 91226302
chr4 90220041 90220051 MZF1 JASPAR yes 49258452
chr4 90220041 90220051 MZF1 JASPAR yes 91226303
chr4 90220044 90220050 SP1 TRANSFAC yes 49258453
chr4 90220044 90220050 SP1 TRANSFAC yes 91226304
chr4 90220044 90220054 SP1 JASPAR yes 49258454
chr4 90220044 90220054 SP1 JASPAR yes 91226305
chr4 90220045 90220056 E2F6 JASPAR yes 49258455
chr4 90220045 90220056 E2F6 JASPAR yes 91226306
chr4 90220065 90220070 H4TF1 TRANSFAC yes 49258456
chr4 90220065 90220070 H4TF1 TRANSFAC yes 91226307
chr4 90220065 90220076 CEBPB JASPAR yes 49258457
chr4 90220065 90220076 CEBPB JASPAR yes 91226308
chr4 90220065 90220078 ATF4 JASPAR yes 49258458
chr4 90220065 90220078 ATF4 JASPAR yes 91226309
chr4 90220066 90220077 CEBPA JASPAR yes 49258459
chr4 90220066 90220077 CEBPA JASPAR yes 91226310
chr4 90220066 90220079 JUN JASPAR yes 49258460
chr4 90220066 90220079 JUN JASPAR yes 91226311
chr4 90220079 90220094 RUNX2 JASPAR yes 49258461
chr4 90220079 90220094 RUNX2 JASPAR yes 91226312
chr4 90220116 90220120 NFE TRANSFAC yes 49258462
chr4 90220116 90220120 NFE TRANSFAC yes 91226313
chr4 90220120 90220124 YY1 TRANSFAC yes 49258463
chr4 90220120 90220124 YY1 TRANSFAC yes 91226314
chr4 90220129 90220137 FOXO3 JASPAR yes 49258464
chr4 90220129 90220137 FOXO3 JASPAR yes 91226315
chr4 90220132 90220146 TCF7L2 JASPAR yes 49258465
chr4 90220132 90220146 TCF7L2 JASPAR yes 91226316
chr4 90220132 90220147 LEF1 JASPAR yes 49258466
chr4 90220132 90220147 LEF1 JASPAR yes 91226317
chr4 90220133 90220148 MEF2C JASPAR yes 49258467
chr4 90220133 90220148 MEF2C JASPAR yes 91226318
chr4 90220134 90220149 MEF2A JASPAR yes 49258468
chr4 90220134 90220149 MEF2A JASPAR yes 91226319
chr4 90220144 90220157 TFAP2A JASPAR yes 49258469
chr4 90220144 90220157 TFAP2A JASPAR yes 91226320
chr4 90220181 90220195 FOXF2 JASPAR yes 49258470
chr4 90220181 90220195 FOXF2 JASPAR yes 91226321
chr4 90220183 90220195 FOXC2 JASPAR yes 49258471
chr4 90220183 90220195 FOXC2 JASPAR yes 91226322
chr4 90220186 90220194 FOXG1 JASPAR yes 49258472
chr4 90220186 90220194 FOXG1 JASPAR yes 91226323
chr4 90220191 90220195 YY1 TRANSFAC yes 49258473
chr4 90220191 90220195 YY1 TRANSFAC yes 91226324
chr4 90220198 90220212 RORA JASPAR yes 49258474
chr4 90220198 90220212 RORA JASPAR yes 91226325
chr4 90220206 90220214 HOXA5 JASPAR yes 49258475
chr4 90220206 90220214 HOXA5 JASPAR yes 91226326
chr4 90220237 90220251 GATA2 JASPAR yes 49258476
chr4 90220237 90220251 GATA2 JASPAR yes 91226327
chr4 90220238 90220241 MYB TRANSFAC yes 49258477
chr4 90220238 90220241 MYB TRANSFAC yes 91226328
chr4 90220241 90220249 GATA3 JASPAR yes 49258478
chr4 90220241 90220249 GATA3 JASPAR yes 91226329
chr4 90220256 90220269 EOMES JASPAR yes 49258479
chr4 90220256 90220269 EOMES JASPAR yes 91226330
chr4 90220258 90220268 TBR1 JASPAR yes 49258480
chr4 90220258 90220268 TBR1 JASPAR yes 91226331
chr4 90220258 90220269 TBX20 JASPAR yes 49258481
chr4 90220258 90220269 TBX2 JASPAR yes 49258482
chr4 90220258 90220269 TBX20 JASPAR yes 91226332
chr4 90220258 90220269 TBX2 JASPAR yes 91226333
chr4 90220259 90220269 TBX21 JASPAR yes 49258483
chr4 90220259 90220269 TBX21 JASPAR yes 91226334
chr4 90220260 90220263 MYB TRANSFAC yes 49258484
chr4 90220260 90220263 MYB TRANSFAC yes 91226335
chr4 90220260 90220268 MGA JASPAR yes 49258485
chr4 90220260 90220268 TBX15 JASPAR yes 49258486
chr4 90220260 90220268 TBX1 JASPAR yes 49258487
chr4 90220260 90220268 TBX4 JASPAR yes 49258488
chr4 90220260 90220268 TBX5 JASPAR yes 49258489
chr4 90220260 90220268 MGA JASPAR yes 91226336
chr4 90220260 90220268 TBX15 JASPAR yes 91226337
chr4 90220260 90220268 TBX1 JASPAR yes 91226338
chr4 90220260 90220268 TBX4 JASPAR yes 91226339
chr4 90220260 90220268 TBX5 JASPAR yes 91226340
chr4 90220292 90220296 YY1 TRANSFAC yes 49258490
chr4 90220292 90220296 YY1 TRANSFAC yes 91226341
chr4 90220292 90220302 ETV3 JASPAR yes 49258491
chr4 90220292 90220302 ETV3 JASPAR yes 91226342
chr4 90220300 90220308 MEIS3 JASPAR yes 49258492
chr4 90220300 90220308 MEIS3 JASPAR yes 91226343
chr4 90220315 90220322 NKX3-1 JASPAR yes 49258493
chr4 90220315 90220322 NKX3-1 JASPAR yes 91226344
chr4 90220321 90220327 HiNF-A TRANSFAC yes 49258494
chr4 90220321 90220327 HiNF-A TRANSFAC yes 91226345
chr4 90220338 90220342 TEAD2 TRANSFAC yes 49258495
chr4 90220338 90220342 TEAD2 TRANSFAC yes 91226346
chr4 90220341 90220346 ETS2 TRANSFAC yes 49258496
chr4 90220341 90220346 ETS2 TRANSFAC yes 91226347
chr4 90220341 90220349 FEV JASPAR yes 49258497
chr4 90220341 90220349 FEV JASPAR yes 91226348
chr4 90220342 90220353 NFKB1 JASPAR yes 49258498
chr4 90220342 90220353 NFKB1 JASPAR yes 91226349
chr4 90220343 90220353 REL JASPAR yes 49258499
chr4 90220343 90220353 REL JASPAR yes 91226350
chr4 90220354 90220368 TCF7L2 JASPAR yes 49258500
chr4 90220354 90220368 TCF7L2 JASPAR yes 91226351
chr4 90220358 90220364 TCF1 TRANSFAC yes 49258501
chr4 90220358 90220364 TCF1 TRANSFAC yes 91226352
chr4 90220379 90220397 ESR2 JASPAR yes 49258502
chr4 90220379 90220397 ESR2 JASPAR yes 91226353
chr4 90220381 90220396 ESR2 JASPAR yes 49258503
chr4 90220381 90220396 ESR2 JASPAR yes 91226354
chr4 90220381 90220401 ESR1 JASPAR yes 49258504
chr4 90220381 90220401 ESR1 JASPAR yes 91226355
chr4 90220399 90220417 NFYA JASPAR yes 49258505
chr4 90220399 90220417 NFYA JASPAR yes 91226356
chr4 90220407 90220412 NFY TRANSFAC yes 49258506
chr4 90220407 90220412 NFY TRANSFAC yes 91226357
SNP sites on vista45389[chr4:90220005-90220418]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr4 90220076 rs527838505 C G,T
ATF4 CEBPA CEBPB JUN
7681307
chr4 90220095 rs191830982 A G no 7681308
chr4 90220136 rs140359806 C T
FOXO3 LEF1 MEF2A MEF2C TCF7L2
7681309
chr4 90220219 rs182457167 A G no 7681310
chr4 90220222 rs185207735 T C no 7681311
chr4 90220351 rs17015380 C T
NFKB1 REL
7681312
Genes possibly regulated by vista45389[chr4:90220005-90220418]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr4 90157537 90229161 - GPRIN3 ENSG00000185477.4 90229161 0.85 0.91 4870 91257
Expression level of Genes
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miRNAs possibly regulated by vista45389[chr4:90220005-90220418]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results