EnhancerDB
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  3. vista45393[chr4:90238207-90238483]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista45393[chr4:90238207-90238483]
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Tissue distribution of vista45393
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Transcription factor that possibly regulate vista45393[chr4:90238207-90238483]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr4 90238220 90238235 HNF4G JASPAR yes 49258736
chr4 90238220 90238235 HNF4G JASPAR yes 91228020
chr4 90238260 90238273 ELF1 JASPAR yes 49258737
chr4 90238260 90238273 ELF1 JASPAR yes 91228021
chr4 90238261 90238264 MYB TRANSFAC yes 49258738
chr4 90238261 90238264 MYB TRANSFAC yes 91228022
chr4 90238261 90238273 EHF JASPAR yes 49258739
chr4 90238261 90238273 ELF1 JASPAR yes 49258740
chr4 90238261 90238273 EHF JASPAR yes 91228023
chr4 90238261 90238273 ELF1 JASPAR yes 91228024
chr4 90238261 90238274 ELF3 JASPAR yes 49258741
chr4 90238261 90238274 ELF3 JASPAR yes 91228025
chr4 90238262 90238273 ELF5 JASPAR yes 49258742
chr4 90238262 90238273 ETV2 JASPAR yes 49258743
chr4 90238262 90238273 ELF5 JASPAR yes 91228026
chr4 90238262 90238273 ETV2 JASPAR yes 91228027
chr4 90238263 90238273 ERF JASPAR yes 49258744
chr4 90238263 90238273 ERG JASPAR yes 49258745
chr4 90238263 90238273 ETS1 JASPAR yes 49258746
chr4 90238263 90238273 FEV JASPAR yes 49258747
chr4 90238263 90238273 FLI1 JASPAR yes 49258748
chr4 90238263 90238273 ERF JASPAR yes 91228028
chr4 90238263 90238273 ERG JASPAR yes 91228029
chr4 90238263 90238273 ETS1 JASPAR yes 91228030
chr4 90238263 90238273 FEV JASPAR yes 91228031
chr4 90238263 90238273 FLI1 JASPAR yes 91228032
chr4 90238263 90238274 ELK4 JASPAR yes 49258749
chr4 90238263 90238274 FLI1 JASPAR yes 49258750
chr4 90238263 90238274 ELK4 JASPAR yes 91228033
chr4 90238263 90238274 FLI1 JASPAR yes 91228034
chr4 90238264 90238272 FEV JASPAR yes 49258751
chr4 90238264 90238272 FEV JASPAR yes 91228035
chr4 90238275 90238281 NFIC JASPAR yes 49258752
chr4 90238275 90238281 NFIC JASPAR yes 91228036
chr4 90238290 90238301 NFIL3 JASPAR yes 49258753
chr4 90238290 90238301 NFIL3 JASPAR yes 91228037
chr4 90238292 90238304 POU2F1 JASPAR yes 49258754
chr4 90238292 90238304 POU2F1 JASPAR yes 91228038
chr4 90238293 90238305 POU3F1 JASPAR yes 49258755
chr4 90238293 90238305 POU3F1 JASPAR yes 91228039
chr4 90238294 90238302 FOXL1 JASPAR yes 49258756
chr4 90238294 90238302 FOXL1 JASPAR yes 91228040
chr4 90238322 90238326 YY1 TRANSFAC yes 49258757
chr4 90238322 90238326 YY1 TRANSFAC yes 91228041
chr4 90238331 90238345 SPIC JASPAR yes 49258758
chr4 90238331 90238345 SPIC JASPAR yes 91228042
chr4 90238331 90238349 SRF JASPAR yes 49258759
chr4 90238331 90238349 SRF JASPAR yes 91228043
chr4 90238332 90238339 SPI1 JASPAR yes 49258760
chr4 90238332 90238339 SPI1 JASPAR yes 91228044
chr4 90238333 90238351 SRF JASPAR yes 49258761
chr4 90238333 90238351 SRF JASPAR yes 91228045
chr4 90238336 90238346 ALX3 JASPAR yes 49258762
chr4 90238336 90238346 EMX1 JASPAR yes 49258763
chr4 90238336 90238346 EMX2 JASPAR yes 49258764
chr4 90238336 90238346 EN2 JASPAR yes 49258765
chr4 90238336 90238346 EVX1 JASPAR yes 49258766
chr4 90238336 90238346 EVX2 JASPAR yes 49258767
chr4 90238336 90238346 GBX1 JASPAR yes 49258768
chr4 90238336 90238346 GBX2 JASPAR yes 49258769
chr4 90238336 90238346 GSX1 JASPAR yes 49258770
chr4 90238336 90238346 HOXA2 JASPAR yes 49258771
chr4 90238336 90238346 HOXB2 JASPAR yes 49258772
chr4 90238336 90238346 HOXB3 JASPAR yes 49258773
chr4 90238336 90238346 LBX2 JASPAR yes 49258774
chr4 90238336 90238346 LHX2 JASPAR yes 49258775
chr4 90238336 90238346 LHX6 JASPAR yes 49258776
chr4 90238336 90238346 MIXL1 JASPAR yes 49258777
chr4 90238336 90238346 NOTO JASPAR yes 49258778
chr4 90238336 90238346 POU6F1 JASPAR yes 49258779
chr4 90238336 90238346 ALX3 JASPAR yes 91228046
chr4 90238336 90238346 EMX1 JASPAR yes 91228047
chr4 90238336 90238346 EMX2 JASPAR yes 91228048
chr4 90238336 90238346 EN2 JASPAR yes 91228049
chr4 90238336 90238346 EVX1 JASPAR yes 91228050
chr4 90238336 90238346 EVX2 JASPAR yes 91228051
chr4 90238336 90238346 GBX1 JASPAR yes 91228052
chr4 90238336 90238346 GBX2 JASPAR yes 91228053
chr4 90238336 90238346 GSX1 JASPAR yes 91228054
chr4 90238336 90238346 HOXA2 JASPAR yes 91228055
chr4 90238336 90238346 HOXB2 JASPAR yes 91228056
chr4 90238336 90238346 HOXB3 JASPAR yes 91228057
chr4 90238336 90238346 LBX2 JASPAR yes 91228058
chr4 90238336 90238346 LHX2 JASPAR yes 91228059
chr4 90238336 90238346 LHX6 JASPAR yes 91228060
chr4 90238336 90238346 MIXL1 JASPAR yes 91228061
chr4 90238336 90238346 NOTO JASPAR yes 91228062
chr4 90238336 90238346 POU6F1 JASPAR yes 91228063
chr4 90238337 90238345 EN1 JASPAR yes 49258780
chr4 90238337 90238345 ISX JASPAR yes 49258781
chr4 90238337 90238345 LBX1 JASPAR yes 49258782
chr4 90238337 90238345 LHX9 JASPAR yes 49258783
chr4 90238337 90238345 PAX4 JASPAR yes 49258784
chr4 90238337 90238345 PDX1 JASPAR yes 49258785
chr4 90238337 90238345 PRRX1 JASPAR yes 49258786
chr4 90238337 90238345 RAX2 JASPAR yes 49258787
chr4 90238337 90238345 SHOX JASPAR yes 49258788
chr4 90238337 90238345 UNCX JASPAR yes 49258789
chr4 90238337 90238345 VAX1 JASPAR yes 49258790
chr4 90238337 90238345 VAX2 JASPAR yes 49258791
chr4 90238337 90238345 VSX1 JASPAR yes 49258792
chr4 90238337 90238345 VSX2 JASPAR yes 49258793
chr4 90238337 90238345 EN1 JASPAR yes 91228064
chr4 90238337 90238345 ISX JASPAR yes 91228065
chr4 90238337 90238345 LBX1 JASPAR yes 91228066
chr4 90238337 90238345 LHX9 JASPAR yes 91228067
chr4 90238337 90238345 PAX4 JASPAR yes 91228068
chr4 90238337 90238345 PDX1 JASPAR yes 91228069
chr4 90238337 90238345 PRRX1 JASPAR yes 91228070
chr4 90238337 90238345 RAX2 JASPAR yes 91228071
chr4 90238337 90238345 SHOX JASPAR yes 91228072
chr4 90238337 90238345 UNCX JASPAR yes 91228073
chr4 90238337 90238345 VAX1 JASPAR yes 91228074
chr4 90238337 90238345 VAX2 JASPAR yes 91228075
chr4 90238337 90238345 VSX1 JASPAR yes 91228076
chr4 90238337 90238345 VSX2 JASPAR yes 91228077
chr4 90238337 90238347 POU6F2 JASPAR yes 49258794
chr4 90238337 90238347 POU6F2 JASPAR yes 91228078
chr4 90238356 90238376 TP53 JASPAR yes 49258795
chr4 90238356 90238376 TP53 JASPAR yes 91228079
chr4 90238357 90238361 YY1 TRANSFAC yes 49258796
chr4 90238357 90238361 YY1 TRANSFAC yes 91228080
chr4 90238384 90238394 SMAD3 JASPAR yes 49258797
chr4 90238384 90238394 SMAD3 JASPAR yes 91228081
chr4 90238391 90238405 TCF7L2 JASPAR yes 49258798
chr4 90238391 90238405 TCF7L2 JASPAR yes 91228082
chr4 90238391 90238406 LEF1 JASPAR yes 49258799
chr4 90238391 90238406 LEF1 JASPAR yes 91228083
chr4 90238395 90238401 TCF4 TRANSFAC yes 49258800
chr4 90238395 90238401 TCF4 TRANSFAC yes 91228084
chr4 90238401 90238406 H4TF1 TRANSFAC yes 49258801
chr4 90238401 90238406 H4TF1 TRANSFAC yes 91228085
chr4 90238413 90238423 TEAD1 JASPAR yes 49258802
chr4 90238413 90238423 TEAD4 JASPAR yes 49258803
chr4 90238413 90238423 TEAD1 JASPAR yes 91228086
chr4 90238413 90238423 TEAD4 JASPAR yes 91228087
chr4 90238414 90238422 TEAD3 JASPAR yes 49258804
chr4 90238414 90238422 TEAD3 JASPAR yes 91228088
chr4 90238432 90238446 SPIC JASPAR yes 49258805
chr4 90238432 90238446 SPIC JASPAR yes 91228089
chr4 90238433 90238444 FOS JASPAR yes 49258806
chr4 90238433 90238444 FOS JASPAR yes 91228090
chr4 90238435 90238446 BATF JASPAR yes 49258807
chr4 90238435 90238446 BATF JASPAR yes 91228091
chr4 90238442 90238446 TEAD2 TRANSFAC yes 49258808
chr4 90238442 90238446 TEAD2 TRANSFAC yes 91228092
chr4 90238442 90238447 TBP TRANSFAC yes 49258809
chr4 90238442 90238447 TBP TRANSFAC yes 91228093
chr4 90238442 90238448 TMF TRANSFAC yes 49258810
chr4 90238442 90238448 TMF TRANSFAC yes 91228094
SNP sites on vista45393[chr4:90238207-90238483]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr4 90238218 rs202004525 CAA C no 7681429
chr4 90238341 rs574288924 A G
ALX3 EMX1 EMX2 EN1 EN2 EVX1 EVX2 GBX1 GBX2 GSX1 HOXA2 HOXB2 HOXB3 ISX LBX1 LBX2 LHX2 LHX6 LHX9 MIXL1 NOTO PAX4 PDX1 POU6F1 POU6F2 PRRX1 RAX2 SHOX SPIC SRF UNCX VAX1 VAX2 VSX1 VSX2
7681430
chr4 90238448 rs75820430 ATGT A
TMF
7681431
Genes possibly regulated by vista45393[chr4:90238207-90238483]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr4 90157537 90229161 - GPRIN3 ENSG00000185477.4 90229161 0.85 0.91 4870 90954
Expression level of Genes
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miRNAs possibly regulated by vista45393[chr4:90238207-90238483]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results