EnhancerDB
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  3. vista4540[chr1:201236006-201236165]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista4540[chr1:201236006-201236165]
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Tissue distribution of vista4540
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Transcription factor that possibly regulate vista4540[chr1:201236006-201236165]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr1 201235864 201236264 FOS UCSC Txn Factor no Conserved 107856043
chr1 201235949 201236205 CEBPB UCSC Txn Factor no Conserved 107856055
chr1 201235953 201236147 JUND UCSC Txn Factor no Conserved 107856057
chr1 201235964 201236111 EP300 UCSC Txn Factor no Conserved 107856060
chr1 201235965 201236143 FOSL2 UCSC Txn Factor no Conserved 107856062
chr1 201236011 201236015 NFE TRANSFAC yes 34484723
chr1 201236011 201236015 NFE TRANSFAC yes 118431359
chr1 201236037 201236041 TEAD2 TRANSFAC yes 34484724
chr1 201236037 201236041 TEAD2 TRANSFAC yes 118431360
chr1 201236037 201236042 TBP TRANSFAC yes 34484725
chr1 201236037 201236042 TBP TRANSFAC yes 118431361
chr1 201236042 201236056 JUN JASPAR yes 34484726
chr1 201236042 201236056 JUN JASPAR yes 118431362
chr1 201236044 201236055 BATF JASPAR yes 34484727
chr1 201236044 201236055 BATF JASPAR yes 118431363
chr1 201236045 201236056 FOSL2 JASPAR yes 34484728
chr1 201236045 201236056 JUNB JASPAR yes 34484729
chr1 201236045 201236056 FOSL2 JASPAR yes 118431364
chr1 201236045 201236056 JUNB JASPAR yes 118431365
chr1 201236046 201236057 FOS JASPAR yes 34484730
chr1 201236046 201236057 FOSL1 JASPAR yes 34484731
chr1 201236046 201236057 JUND JASPAR yes 34484732
chr1 201236046 201236057 NFE2 JASPAR yes 34484733
chr1 201236046 201236057 FOS JASPAR yes 118431366
chr1 201236046 201236057 FOSL1 JASPAR yes 118431367
chr1 201236046 201236057 JUND JASPAR yes 118431368
chr1 201236046 201236057 NFE2 JASPAR yes 118431369
chr1 201236047 201236056 JDP2 JASPAR yes 34484734
chr1 201236047 201236056 JDP2 JASPAR yes 118431370
chr1 201236047 201236058 FOSL2 JASPAR yes 34484735
chr1 201236047 201236058 JUNB JASPAR yes 34484736
chr1 201236047 201236058 FOSL2 JASPAR yes 118431371
chr1 201236047 201236058 JUNB JASPAR yes 118431372
chr1 201236047 201236061 JUN JASPAR yes 34484737
chr1 201236047 201236061 JUN JASPAR yes 118431373
chr1 201236052 201236060 MGA JASPAR yes 34484738
chr1 201236052 201236060 TBX1 JASPAR yes 34484739
chr1 201236052 201236060 MGA JASPAR yes 118431374
chr1 201236052 201236060 TBX1 JASPAR yes 118431375
chr1 201236052 201236064 HES5 JASPAR yes 34484740
chr1 201236052 201236064 HES7 JASPAR yes 34484741
chr1 201236052 201236064 HES5 JASPAR yes 118431376
chr1 201236052 201236064 HES7 JASPAR yes 118431377
chr1 201236053 201236063 CLOCK JASPAR yes 34484742
chr1 201236053 201236063 HEY1 JASPAR yes 34484743
chr1 201236053 201236063 HEY2 JASPAR yes 34484744
chr1 201236053 201236063 MAX JASPAR yes 34484745
chr1 201236053 201236063 CLOCK JASPAR yes 118431378
chr1 201236053 201236063 HEY1 JASPAR yes 118431379
chr1 201236053 201236063 HEY2 JASPAR yes 118431380
chr1 201236053 201236063 MAX JASPAR yes 118431381
chr1 201236054 201236064 MAX JASPAR yes 34484746
chr1 201236054 201236064 MAX JASPAR yes 118431382
chr1 201236055 201236060 MYC TRANSFAC yes 34484747
chr1 201236055 201236060 USF1 TRANSFAC yes 34484748
chr1 201236055 201236060 USF2 TRANSFAC yes 34484749
chr1 201236055 201236060 MYC TRANSFAC yes 118431383
chr1 201236055 201236060 USF1 TRANSFAC yes 118431384
chr1 201236055 201236060 USF2 TRANSFAC yes 118431385
chr1 201236061 201236076 AR JASPAR yes 34484750
chr1 201236061 201236076 AR JASPAR yes 118431386
chr1 201236078 201236089 CEBPB JASPAR yes 34484751
chr1 201236078 201236089 CEBPB JASPAR yes 118431387
chr1 201236078 201236091 ATF4 JASPAR yes 34484752
chr1 201236078 201236091 ATF4 JASPAR yes 118431388
chr1 201236078 201236093 JUND JASPAR yes 34484753
chr1 201236078 201236093 JUND JASPAR yes 118431389
chr1 201236079 201236092 JUN JASPAR yes 34484754
chr1 201236079 201236092 JUN JASPAR yes 118431390
chr1 201236095 201236109 PAX6 JASPAR yes 34484755
chr1 201236095 201236109 PAX6 JASPAR yes 118431391
chr1 201236096 201236113 PAX9 JASPAR yes 34484756
chr1 201236096 201236113 PAX9 JASPAR yes 118431392
chr1 201236097 201236116 PAX5 JASPAR yes 34484757
chr1 201236097 201236116 PAX5 JASPAR yes 118431393
chr1 201236117 201236136 RFX2 JASPAR yes 34484758
chr1 201236117 201236136 RFX2 JASPAR yes 118431394
chr1 201236128 201236144 SOX4 JASPAR yes 34484759
chr1 201236128 201236144 SOX4 JASPAR yes 118431395
chr1 201236131 201236136 ETS2 TRANSFAC yes 34484760
chr1 201236131 201236136 ETS2 TRANSFAC yes 118431396
chr1 201236149 201236170 REST JASPAR yes 34484761
chr1 201236149 201236170 REST JASPAR yes 118431397
chr1 201236150 201236169 REST JASPAR yes 34484762
chr1 201236150 201236169 REST JASPAR yes 118431398
SNP sites on vista4540[chr1:201236006-201236165]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr1 201236014 rs530002470 G A
CEBPB EP300 FOS FOSL2 JUND NFE
852030
chr1 201236140 rs532514835 T C,G
CEBPB FOS FOSL2 JUND SOX4
852031
chr1 201236141 rs12046907 G A
CEBPB FOS FOSL2 JUND SOX4
852032
Genes possibly regulated by vista4540[chr1:201236006-201236165]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr1 201103900 201140702 - TMEM9 ENSG00000116857.12 201140702 0.77 1.0 1701 4696
chr1 201159953 201198080 + IGFN1 ENSG00000163395.12 201159953 0.99 1.0 1702 23947
chr1 201252580 201302121 + PKP1 ENSG00000081277.7 201252580 0.95 0.99 1703 83585
Expression level of Genes
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miRNAs possibly regulated by vista4540[chr1:201236006-201236165]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results