EnhancerDB
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  3. vista4544[chr1:201277329-201277484]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista4544[chr1:201277329-201277484]
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Tissue distribution of vista4544
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Transcription factor that possibly regulate vista4544[chr1:201277329-201277484]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr1 201277340 201277350 SP1 JASPAR yes 34489254
chr1 201277340 201277350 SP1 JASPAR yes 118431477
chr1 201277406 201277419 TFAP2A JASPAR yes 34489255
chr1 201277406 201277419 TFAP2B JASPAR yes 34489256
chr1 201277406 201277419 TFAP2C JASPAR yes 34489257
chr1 201277406 201277419 TFAP2A JASPAR yes 118431478
chr1 201277406 201277419 TFAP2B JASPAR yes 118431479
chr1 201277406 201277419 TFAP2C JASPAR yes 118431480
chr1 201277406 201277421 TFAP2C JASPAR yes 34489258
chr1 201277406 201277421 TFAP2C JASPAR yes 118431481
chr1 201277407 201277418 EBF1 JASPAR yes 34489259
chr1 201277407 201277418 EBF1 JASPAR yes 118431482
chr1 201277415 201277430 RFX5 JASPAR yes 34489260
chr1 201277415 201277430 RFX5 JASPAR yes 118431483
chr1 201277434 201277438 NFE TRANSFAC yes 34489261
chr1 201277434 201277438 NFE TRANSFAC yes 118431484
chr1 201277463 201277471 HOXA5 JASPAR yes 34489262
chr1 201277463 201277471 HOXA5 JASPAR yes 118431485
SNP sites on vista4544[chr1:201277329-201277484]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr1 201277343 rs560821116 C T
SP1
852571
chr1 201277367 rs2268161 C T no 852572
Genes possibly regulated by vista4544[chr1:201277329-201277484]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr1 201252580 201302121 + PKP1 ENSG00000081277.7 201252580 0.95 0.99 1703 75251
chr1 201328136 201346890 - TNNT2 ENSG00000118194.14 201346890 1.0 1.0 1704 30594
chr1 201342372 201368736 - LAD1 ENSG00000159166.9 201368736 0.9 1.0 1705 8748
Expression level of Genes
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miRNAs possibly regulated by vista4544[chr1:201277329-201277484]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results