EnhancerDB
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  3. vista4545[chr1:201280694-201280963]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista4545[chr1:201280694-201280963]
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Tissue distribution of vista4545
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Transcription factor that possibly regulate vista4545[chr1:201280694-201280963]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr1 201280140 201281328 POLR2A UCSC Txn Factor no Conserved 107856156
chr1 201280695 201280709 ZIC1 JASPAR yes 34489662
chr1 201280695 201280709 ZIC1 JASPAR yes 118431486
chr1 201280695 201280710 ZIC3 JASPAR yes 34489663
chr1 201280695 201280710 ZIC4 JASPAR yes 34489664
chr1 201280695 201280710 ZIC3 JASPAR yes 118431487
chr1 201280695 201280710 ZIC4 JASPAR yes 118431488
chr1 201280705 201280720 LEF1 JASPAR yes 34489665
chr1 201280705 201280720 LEF1 JASPAR yes 118431489
chr1 201280735 201280745 SP1 TRANSFAC yes 34489666
chr1 201280735 201280745 SP1 TRANSFAC yes 118431490
chr1 201280736 201280742 SP1 TRANSFAC yes 34489667
chr1 201280736 201280742 SP1 TRANSFAC yes 118431491
chr1 201280736 201280746 SP1 JASPAR yes 34489668
chr1 201280736 201280746 SP1 JASPAR yes 118431492
chr1 201280740 201280746 MZF1 JASPAR yes 34489669
chr1 201280740 201280746 MZF1 JASPAR yes 118431493
chr1 201280772 201280785 NFKB1 JASPAR yes 34489670
chr1 201280772 201280785 NFKB2 JASPAR yes 34489671
chr1 201280772 201280785 NFKB1 JASPAR yes 118431494
chr1 201280772 201280785 NFKB2 JASPAR yes 118431495
chr1 201280773 201280783 NFKB1 JASPAR yes 34489672
chr1 201280773 201280783 REL JASPAR yes 34489673
chr1 201280773 201280783 NFKB1 JASPAR yes 118431496
chr1 201280773 201280783 REL JASPAR yes 118431497
chr1 201280774 201280784 REL JASPAR yes 34489674
chr1 201280774 201280784 REL JASPAR yes 118431498
chr1 201280783 201280788 MYC TRANSFAC yes 34489675
chr1 201280783 201280788 MYC TRANSFAC yes 118431499
chr1 201280791 201280794 MYB TRANSFAC yes 34489676
chr1 201280791 201280794 MYB TRANSFAC yes 118431500
chr1 201280799 201280813 PLAG1 JASPAR yes 34489677
chr1 201280799 201280813 PLAG1 JASPAR yes 118431501
chr1 201280813 201280828 PRDM1 JASPAR yes 34489678
chr1 201280813 201280828 PRDM1 JASPAR yes 118431502
chr1 201280830 201280836 MAZ TRANSFAC yes 34489679
chr1 201280830 201280836 MAZ TRANSFAC yes 118431503
chr1 201280832 201280846 PLAG1 JASPAR yes 34489680
chr1 201280832 201280846 PLAG1 JASPAR yes 118431504
chr1 201280832 201280847 NR2C2 JASPAR yes 34489681
chr1 201280832 201280847 NR2C2 JASPAR yes 118431505
chr1 201280834 201280844 SP1 JASPAR yes 34489682
chr1 201280834 201280844 SP1 JASPAR yes 118431506
chr1 201280834 201280855 ZNF263 JASPAR yes 34489683
chr1 201280834 201280855 ZNF263 JASPAR yes 118431507
chr1 201280835 201280839 LFA1 TRANSFAC yes 34489684
chr1 201280835 201280839 LFA1 TRANSFAC yes 118431508
chr1 201280840 201280852 ZBTB7A JASPAR yes 34489685
chr1 201280840 201280852 ZBTB7A JASPAR yes 118431509
chr1 201280842 201280847 SP1 TRANSFAC yes 34489686
chr1 201280842 201280847 SP1 TRANSFAC yes 118431510
chr1 201280845 201280850 SP1 TRANSFAC yes 34489687
chr1 201280845 201280850 SP1 TRANSFAC yes 118431511
chr1 201280846 201280851 SP1 TRANSFAC yes 34489688
chr1 201280846 201280851 SP1 TRANSFAC yes 118431512
chr1 201280846 201280855 THAP1 JASPAR yes 34489689
chr1 201280846 201280855 THAP1 JASPAR yes 118431513
chr1 201280847 201280867 TP53 JASPAR yes 34489690
chr1 201280847 201280867 TP53 JASPAR yes 118431514
chr1 201280849 201280853 LFA1 TRANSFAC yes 34489691
chr1 201280849 201280853 LFA1 TRANSFAC yes 118431515
chr1 201280872 201280886 TLX1 JASPAR yes 34489692
chr1 201280872 201280886 TLX1 JASPAR yes 118431516
chr1 201280903 201280921 MAFF JASPAR yes 34489693
chr1 201280903 201280921 MAFF JASPAR yes 118431517
chr1 201280904 201280919 MAFK JASPAR yes 34489694
chr1 201280904 201280919 MAFK JASPAR yes 118431518
chr1 201280905 201280920 TP53 JASPAR yes 34489695
chr1 201280905 201280920 TP53 JASPAR yes 118431519
chr1 201280911 201280921 ID4 JASPAR yes 34489696
chr1 201280911 201280921 TCF3 JASPAR yes 34489697
chr1 201280911 201280921 TCF4 JASPAR yes 34489698
chr1 201280911 201280921 ID4 JASPAR yes 118431520
chr1 201280911 201280921 TCF3 JASPAR yes 118431521
chr1 201280911 201280921 TCF4 JASPAR yes 118431522
chr1 201280912 201280921 SNAI2 JASPAR yes 34489699
chr1 201280912 201280921 SNAI2 JASPAR yes 118431523
chr1 201280913 201280918 USF2 TRANSFAC yes 34489700
chr1 201280913 201280918 USF2 TRANSFAC yes 118431524
chr1 201280926 201280937 FOXC1 JASPAR yes 34489701
chr1 201280926 201280937 FOXC1 JASPAR yes 118431525
SNP sites on vista4545[chr1:201280694-201280963]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr1 201280830 rs566668423 A G
MAZ POLR2A
852623
chr1 201280890 rs549281141 C G
POLR2A
852624
chr1 201280945 rs1772855 C T
POLR2A
852625
chr1 201280956 rs832151 C G,T
POLR2A
852626
Genes possibly regulated by vista4545[chr1:201280694-201280963]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr1 201252580 201302121 + PKP1 ENSG00000081277.7 201252580 0.95 0.99 1703 71886
chr1 201328136 201346890 - TNNT2 ENSG00000118194.14 201346890 1.0 1.0 1704 34073
chr1 201342372 201368736 - LAD1 ENSG00000159166.9 201368736 0.9 1.0 1705 12227
Expression level of Genes
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miRNAs possibly regulated by vista4545[chr1:201280694-201280963]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results