EnhancerDB
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  3. vista4550[chr1:201431088-201431253]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista4550[chr1:201431088-201431253]
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Tissue distribution of vista4550
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Transcription factor that possibly regulate vista4550[chr1:201431088-201431253]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr1 201430594 201431444 SMARCC1 UCSC Txn Factor no Conserved 107856215
chr1 201430992 201431392 FOS UCSC Txn Factor no Conserved 107856233
chr1 201431033 201431484 MYC UCSC Txn Factor no Conserved 107856243
chr1 201431046 201431416 MAZ UCSC Txn Factor no Conserved 107856248
chr1 201431057 201431456 MAX UCSC Txn Factor no Conserved 107856255
chr1 201431092 201431370 JUND UCSC Txn Factor no Conserved 107856262
chr1 201431106 201431345 FOSL2 UCSC Txn Factor no Conserved 107856270
chr1 201431073 201431093 TP63 JASPAR yes 34496387
chr1 201431073 201431093 TP63 JASPAR yes 118431619
chr1 201431108 201431128 ESR1 JASPAR yes 34496388
chr1 201431108 201431128 ESR1 JASPAR yes 118431620
chr1 201431111 201431129 ESR1 JASPAR yes 34496389
chr1 201431111 201431129 ESR2 JASPAR yes 34496390
chr1 201431111 201431129 ESR1 JASPAR yes 118431621
chr1 201431111 201431129 ESR2 JASPAR yes 118431622
chr1 201431112 201431129 ESR1 JASPAR yes 34496391
chr1 201431112 201431129 ESR1 JASPAR yes 118431623
chr1 201431117 201431132 RFX5 JASPAR yes 34496392
chr1 201431117 201431132 RFX5 JASPAR yes 118431624
chr1 201431121 201431136 RUNX2 JASPAR yes 34496393
chr1 201431121 201431136 RUNX2 JASPAR yes 118431625
chr1 201431138 201431159 ZNF263 JASPAR yes 34496394
chr1 201431138 201431159 ZNF263 JASPAR yes 118431626
chr1 201431141 201431162 ZNF263 JASPAR yes 34496395
chr1 201431141 201431162 ZNF263 JASPAR yes 118431627
chr1 201431149 201431167 ESR1 JASPAR yes 34496396
chr1 201431149 201431167 ESR1 JASPAR yes 118431628
chr1 201431154 201431175 ZNF263 JASPAR yes 34496397
chr1 201431154 201431175 ZNF263 JASPAR yes 118431629
chr1 201431156 201431162 MZF1 JASPAR yes 34496398
chr1 201431156 201431162 MZF1 JASPAR yes 118431630
chr1 201431157 201431177 RREB1 JASPAR yes 34496399
chr1 201431157 201431177 RREB1 JASPAR yes 118431631
chr1 201431161 201431171 SP1 JASPAR yes 34496400
chr1 201431161 201431171 SP1 JASPAR yes 118431632
chr1 201431179 201431189 NHLH1 JASPAR yes 34496401
chr1 201431179 201431189 NHLH1 JASPAR yes 118431633
chr1 201431185 201431205 TP63 JASPAR yes 34496402
chr1 201431185 201431205 TP63 JASPAR yes 118431634
chr1 201431193 201431200 JUN TRANSFAC yes 34496403
chr1 201431193 201431200 SP1 TRANSFAC yes 34496404
chr1 201431193 201431200 JUN TRANSFAC yes 118431635
chr1 201431193 201431200 SP1 TRANSFAC yes 118431636
chr1 201431204 201431208 NFE TRANSFAC yes 34496405
chr1 201431204 201431208 NFE TRANSFAC yes 118431637
chr1 201431210 201431225 RFX5 JASPAR yes 34496406
chr1 201431210 201431225 RFX5 JASPAR yes 118431638
chr1 201431218 201431232 JUN JASPAR yes 34496407
chr1 201431218 201431232 JUN JASPAR yes 118431639
chr1 201431220 201431231 BATF JASPAR yes 34496408
chr1 201431220 201431231 BATF JASPAR yes 118431640
chr1 201431221 201431232 FOSL2 JASPAR yes 34496409
chr1 201431221 201431232 JUNB JASPAR yes 34496410
chr1 201431221 201431232 FOSL2 JASPAR yes 118431641
chr1 201431221 201431232 JUNB JASPAR yes 118431642
chr1 201431222 201431233 FOS JASPAR yes 34496411
chr1 201431222 201431233 FOSL1 JASPAR yes 34496412
chr1 201431222 201431233 JUND JASPAR yes 34496413
chr1 201431222 201431233 NFE2 JASPAR yes 34496414
chr1 201431222 201431233 FOS JASPAR yes 118431643
chr1 201431222 201431233 FOSL1 JASPAR yes 118431644
chr1 201431222 201431233 JUND JASPAR yes 118431645
chr1 201431222 201431233 NFE2 JASPAR yes 118431646
chr1 201431223 201431232 JDP2 JASPAR yes 34496415
chr1 201431223 201431232 JDP2 JASPAR yes 118431647
chr1 201431223 201431234 FOSL2 JASPAR yes 34496416
chr1 201431223 201431234 JUNB JASPAR yes 34496417
chr1 201431223 201431234 FOSL2 JASPAR yes 118431648
chr1 201431223 201431234 JUNB JASPAR yes 118431649
chr1 201431223 201431237 JUN JASPAR yes 34496418
chr1 201431223 201431237 JUN JASPAR yes 118431650
chr1 201431237 201431254 RXRA JASPAR yes 34496419
chr1 201431237 201431254 RXRA JASPAR yes 118431651
chr1 201431238 201431243 SP1 TRANSFAC yes 34496420
chr1 201431238 201431243 SP1 TRANSFAC yes 118431652
chr1 201431239 201431249 ZNF740 JASPAR yes 34496421
chr1 201431239 201431249 ZNF740 JASPAR yes 118431653
chr1 201431241 201431256 JUND JASPAR yes 34496422
chr1 201431241 201431256 JUND JASPAR yes 118431654
chr1 201431242 201431255 JUN JASPAR yes 34496423
chr1 201431242 201431255 JUN JASPAR yes 118431655
SNP sites on vista4550[chr1:201431088-201431253]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr1 201431167 rs576925044 A G
ESR1 FOS FOSL2 JUND MAX MAZ MYC RREB1 SMARCC1 SP1 ZNF263
853876
chr1 201431175 rs6427909 G A,C
FOS FOSL2 JUND MAX MAZ MYC RREB1 SMARCC1 ZNF263
853877
chr1 201431177 rs552840744 A G,T
FOS FOSL2 JUND MAX MAZ MYC RREB1 SMARCC1
853878
chr1 201431206 rs74136626 T C
FOS FOSL2 JUND MAX MAZ MYC NFE SMARCC1
853879
chr1 201431247 rs10920208 T C
FOS FOSL2 JUN JUND MAX MAZ MYC RXRA SMARCC1 ZNF740
853880
Genes possibly regulated by vista4550[chr1:201431088-201431253]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr1 201328136 201346890 - TNNT2 ENSG00000118194.14 201346890 1.0 1.0 1704 15802
chr1 201342372 201368736 - LAD1 ENSG00000159166.9 201368736 0.9 1.0 1705 37648
chr1 201373625 201398994 - TNNI1 ENSG00000159173.14 201398994 0.98 0.97 1706 67906
chr1 201434620 201438365 - PHLDA3 ENSG00000174307.5 201438365 0.73 1.0 1707 92888
chr1 201452658 201478584 - CSRP1 ENSG00000159176.9 201478584 0.86 0.99 1708 52669
Expression level of Genes
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miRNAs possibly regulated by vista4550[chr1:201431088-201431253]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results