EnhancerDB
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  3. vista4552[chr1:201449602-201449822]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista4552[chr1:201449602-201449822]
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Tissue distribution of vista4552
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Transcription factor that possibly regulate vista4552[chr1:201449602-201449822]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr1 201449281 201450369 POLR2A UCSC Txn Factor no Conserved 107856290
chr1 201449385 201450062 RCOR1 UCSC Txn Factor no Conserved 107856302
chr1 201449588 201449607 CTCF JASPAR yes 34497650
chr1 201449588 201449607 CTCF JASPAR yes 118431665
chr1 201449598 201449613 MEF2C JASPAR yes 34497651
chr1 201449598 201449613 MEF2C JASPAR yes 118431666
chr1 201449599 201449614 MEF2A JASPAR yes 34497652
chr1 201449599 201449614 MEF2A JASPAR yes 118431667
chr1 201449603 201449617 SPI1 JASPAR yes 34497653
chr1 201449603 201449617 SPIC JASPAR yes 34497654
chr1 201449603 201449617 SPI1 JASPAR yes 118431668
chr1 201449603 201449617 SPIC JASPAR yes 118431669
chr1 201449603 201449618 STAT2 JASPAR yes 34497655
chr1 201449603 201449618 STAT2 JASPAR yes 118431670
chr1 201449609 201449616 SPI1 JASPAR yes 34497656
chr1 201449609 201449616 SPI1 JASPAR yes 118431671
chr1 201449609 201449624 HSF1 JASPAR yes 34497657
chr1 201449609 201449624 HSF1 JASPAR yes 118431672
chr1 201449612 201449627 STAT1 JASPAR yes 34497658
chr1 201449612 201449627 STAT1 JASPAR yes 118431673
chr1 201449614 201449625 STAT1 JASPAR yes 34497659
chr1 201449614 201449625 STAT3 JASPAR yes 34497660
chr1 201449614 201449625 STAT1 JASPAR yes 118431674
chr1 201449614 201449625 STAT3 JASPAR yes 118431675
chr1 201449614 201449627 ELF1 JASPAR yes 34497661
chr1 201449614 201449627 ELF1 JASPAR yes 118431676
chr1 201449615 201449627 EHF JASPAR yes 34497662
chr1 201449615 201449627 ELF1 JASPAR yes 34497663
chr1 201449615 201449627 ELF4 JASPAR yes 34497664
chr1 201449615 201449627 EHF JASPAR yes 118431677
chr1 201449615 201449627 ELF1 JASPAR yes 118431678
chr1 201449615 201449627 ELF4 JASPAR yes 118431679
chr1 201449615 201449628 ELF3 JASPAR yes 34497665
chr1 201449615 201449628 ELF3 JASPAR yes 118431680
chr1 201449616 201449627 ELF5 JASPAR yes 34497666
chr1 201449616 201449627 ELF5 JASPAR yes 118431681
chr1 201449617 201449624 ETS1 TRANSFAC yes 34497667
chr1 201449617 201449624 ETS1 TRANSFAC yes 118431682
chr1 201449617 201449628 ELK4 JASPAR yes 34497668
chr1 201449617 201449628 ELK4 JASPAR yes 118431683
chr1 201449618 201449626 EHF JASPAR yes 34497669
chr1 201449618 201449626 FEV JASPAR yes 34497670
chr1 201449618 201449626 EHF JASPAR yes 118431684
chr1 201449618 201449626 FEV JASPAR yes 118431685
chr1 201449619 201449626 SPI1 JASPAR yes 34497671
chr1 201449619 201449626 SPI1 JASPAR yes 118431686
chr1 201449636 201449640 YY1 TRANSFAC yes 34497672
chr1 201449636 201449640 YY1 TRANSFAC yes 118431687
chr1 201449658 201449670 NHLH1 JASPAR yes 34497673
chr1 201449658 201449670 NHLH1 JASPAR yes 118431688
chr1 201449659 201449669 NHLH1 JASPAR yes 34497674
chr1 201449659 201449669 NHLH1 JASPAR yes 118431689
chr1 201449667 201449677 SP1 JASPAR yes 34497675
chr1 201449667 201449677 SP1 JASPAR yes 118431690
chr1 201449667 201449683 TEAD2 TRANSFAC yes 34497676
chr1 201449667 201449683 TEAD2 TRANSFAC yes 118431691
chr1 201449668 201449676 SP1 TRANSFAC yes 34497677
chr1 201449668 201449676 SP1 TRANSFAC yes 118431692
chr1 201449668 201449677 SP1 TRANSFAC yes 34497678
chr1 201449668 201449677 SP1 TRANSFAC yes 118431693
chr1 201449669 201449674 SP1 TRANSFAC yes 34497679
chr1 201449669 201449674 SP1 TRANSFAC yes 118431694
chr1 201449670 201449675 SP1 TRANSFAC yes 34497680
chr1 201449670 201449675 SP1 TRANSFAC yes 118431695
chr1 201449670 201449676 SP1 TRANSFAC yes 34497681
chr1 201449670 201449676 SP1 TRANSFAC yes 118431696
chr1 201449672 201449682 SP1 JASPAR yes 34497682
chr1 201449672 201449682 SP1 JASPAR yes 118431697
chr1 201449672 201449688 TEAD2 TRANSFAC yes 34497683
chr1 201449672 201449688 TEAD2 TRANSFAC yes 118431698
chr1 201449673 201449681 SP1 TRANSFAC yes 34497684
chr1 201449673 201449681 SP1 TRANSFAC yes 118431699
chr1 201449673 201449682 SP1 TRANSFAC yes 34497685
chr1 201449673 201449682 SP1 TRANSFAC yes 118431700
chr1 201449674 201449679 SP1 TRANSFAC yes 34497686
chr1 201449674 201449679 SP1 TRANSFAC yes 118431701
chr1 201449675 201449680 SP1 TRANSFAC yes 34497687
chr1 201449675 201449680 SP1 TRANSFAC yes 118431702
chr1 201449675 201449681 SP1 TRANSFAC yes 34497688
chr1 201449675 201449681 SP1 TRANSFAC yes 118431703
chr1 201449677 201449687 SP1 JASPAR yes 34497689
chr1 201449677 201449687 SP1 JASPAR yes 118431704
chr1 201449677 201449693 TEAD2 TRANSFAC yes 34497690
chr1 201449677 201449693 TEAD2 TRANSFAC yes 118431705
chr1 201449678 201449686 SP1 TRANSFAC yes 34497691
chr1 201449678 201449686 SP1 TRANSFAC yes 118431706
chr1 201449678 201449687 SP1 TRANSFAC yes 34497692
chr1 201449678 201449687 SP1 TRANSFAC yes 118431707
chr1 201449679 201449684 SP1 TRANSFAC yes 34497693
chr1 201449679 201449684 SP1 TRANSFAC yes 118431708
chr1 201449680 201449685 SP1 TRANSFAC yes 34497694
chr1 201449680 201449685 SP1 TRANSFAC yes 118431709
chr1 201449680 201449686 SP1 TRANSFAC yes 34497695
chr1 201449680 201449686 SP1 TRANSFAC yes 118431710
chr1 201449682 201449692 SP1 JASPAR yes 34497696
chr1 201449682 201449692 SP1 JASPAR yes 118431711
chr1 201449682 201449698 TEAD2 TRANSFAC yes 34497697
chr1 201449682 201449698 TEAD2 TRANSFAC yes 118431712
chr1 201449683 201449691 SP1 TRANSFAC yes 34497698
chr1 201449683 201449691 SP1 TRANSFAC yes 118431713
chr1 201449683 201449692 SP1 TRANSFAC yes 34497699
chr1 201449683 201449692 SP1 TRANSFAC yes 118431714
chr1 201449684 201449689 SP1 TRANSFAC yes 34497700
chr1 201449684 201449689 SP1 TRANSFAC yes 118431715
chr1 201449685 201449690 SP1 TRANSFAC yes 34497701
chr1 201449685 201449690 SP1 TRANSFAC yes 118431716
chr1 201449685 201449691 SP1 TRANSFAC yes 34497702
chr1 201449685 201449691 SP1 TRANSFAC yes 118431717
chr1 201449687 201449697 SP1 JASPAR yes 34497703
chr1 201449687 201449697 SP1 JASPAR yes 118431718
chr1 201449687 201449703 TEAD2 TRANSFAC yes 34497704
chr1 201449687 201449703 TEAD2 TRANSFAC yes 118431719
chr1 201449688 201449696 SP1 TRANSFAC yes 34497705
chr1 201449688 201449696 SP1 TRANSFAC yes 118431720
chr1 201449688 201449697 SP1 TRANSFAC yes 34497706
chr1 201449688 201449697 SP1 TRANSFAC yes 118431721
chr1 201449689 201449694 SP1 TRANSFAC yes 34497707
chr1 201449689 201449694 SP1 TRANSFAC yes 118431722
chr1 201449690 201449695 SP1 TRANSFAC yes 34497708
chr1 201449690 201449695 SP1 TRANSFAC yes 118431723
chr1 201449690 201449696 SP1 TRANSFAC yes 34497709
chr1 201449690 201449696 SP1 TRANSFAC yes 118431724
chr1 201449692 201449702 SP1 JASPAR yes 34497710
chr1 201449692 201449702 SP1 JASPAR yes 118431725
chr1 201449693 201449701 SP1 TRANSFAC yes 34497711
chr1 201449693 201449701 SP1 TRANSFAC yes 118431726
chr1 201449693 201449702 SP1 TRANSFAC yes 34497712
chr1 201449693 201449702 SP1 TRANSFAC yes 118431727
chr1 201449694 201449699 SP1 TRANSFAC yes 34497713
chr1 201449694 201449699 SP1 TRANSFAC yes 118431728
chr1 201449695 201449700 SP1 TRANSFAC yes 34497714
chr1 201449695 201449700 SP1 TRANSFAC yes 118431729
chr1 201449695 201449701 SP1 TRANSFAC yes 34497715
chr1 201449695 201449701 SP1 TRANSFAC yes 118431730
chr1 201449712 201449718 NFIC JASPAR yes 34497716
chr1 201449712 201449718 NFIC JASPAR yes 118431731
chr1 201449718 201449728 NKX2-3 JASPAR yes 34497717
chr1 201449718 201449728 NKX2-3 JASPAR yes 118431732
chr1 201449719 201449728 NKX3-2 JASPAR yes 34497718
chr1 201449719 201449728 NKX3-2 JASPAR yes 118431733
chr1 201449765 201449775 SP1 JASPAR yes 34497719
chr1 201449765 201449775 SP1 JASPAR yes 118431734
chr1 201449777 201449781 H4TF2 TRANSFAC yes 34497720
chr1 201449777 201449781 H4TF2 TRANSFAC yes 118431735
chr1 201449808 201449812 LFA1 TRANSFAC yes 34497721
chr1 201449808 201449812 LFA1 TRANSFAC yes 118431736
SNP sites on vista4552[chr1:201449602-201449822]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr1 201449762 rs12758212 A G
POLR2A RCOR1
854065
chr1 201449798 rs147959242 CGGCTGAGCCCG C
POLR2A RCOR1
854066
chr1 201449798 rs376776047 CGGCTGAGCCCG C
POLR2A RCOR1
854067
chr1 201449809 rs182179701 G A,T
LFA1 POLR2A RCOR1
854068
chr1 201449816 rs542572540 C G,T
POLR2A RCOR1
854069
chr1 201449819 rs571876869 CAG C
POLR2A RCOR1
854070
chr1 201449819 rs72374173 CAG C
POLR2A RCOR1
854071
Genes possibly regulated by vista4552[chr1:201449602-201449822]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr1 201342372 201368736 - LAD1 ENSG00000159166.9 201368736 0.9 1.0 1705 19134
chr1 201373625 201398994 - TNNI1 ENSG00000159173.14 201398994 0.98 0.97 1706 49392
chr1 201434620 201438365 - PHLDA3 ENSG00000174307.5 201438365 0.73 1.0 1707 88763
chr1 201452658 201478584 - CSRP1 ENSG00000159176.9 201478584 0.86 0.99 1708 71238
Expression level of Genes
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miRNAs possibly regulated by vista4552[chr1:201449602-201449822]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results