EnhancerDB
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  3. vista45555[chr4:106028288-106028521]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista45555[chr4:106028288-106028521]
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Tissue distribution of vista45555
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Transcription factor that possibly regulate vista45555[chr4:106028288-106028521]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr4 106028289 106028307 SRF JASPAR yes 49266255
chr4 106028289 106028307 SRF JASPAR yes 91798796
chr4 106028296 106028308 YY1 JASPAR yes 49266256
chr4 106028296 106028308 YY1 JASPAR yes 91798797
chr4 106028297 106028313 E2F2 JASPAR yes 49266257
chr4 106028297 106028313 E2F2 JASPAR yes 91798798
chr4 106028309 106028313 NFE TRANSFAC yes 49266258
chr4 106028309 106028313 NFE TRANSFAC yes 91798799
chr4 106028310 106028315 GATA2 JASPAR yes 49266259
chr4 106028310 106028315 GATA2 JASPAR yes 91798800
chr4 106028310 106028327 RARA JASPAR yes 49266260
chr4 106028310 106028327 RARA JASPAR yes 91798801
chr4 106028317 106028321 YY1 TRANSFAC yes 49266261
chr4 106028317 106028321 YY1 TRANSFAC yes 91798802
chr4 106028335 106028346 NFIL3 JASPAR yes 49266262
chr4 106028335 106028346 NFIL3 JASPAR yes 91798803
chr4 106028335 106028349 ATF7 JASPAR yes 49266263
chr4 106028335 106028349 ATF7 JASPAR yes 91798804
chr4 106028336 106028348 DBP JASPAR yes 49266264
chr4 106028336 106028348 HLF JASPAR yes 49266265
chr4 106028336 106028348 JDP2 JASPAR yes 49266266
chr4 106028336 106028348 TEF JASPAR yes 49266267
chr4 106028336 106028348 DBP JASPAR yes 91798805
chr4 106028336 106028348 HLF JASPAR yes 91798806
chr4 106028336 106028348 JDP2 JASPAR yes 91798807
chr4 106028336 106028348 TEF JASPAR yes 91798808
chr4 106028337 106028347 CEBPB JASPAR yes 49266268
chr4 106028337 106028347 CEBPD JASPAR yes 49266269
chr4 106028337 106028347 CEBPE JASPAR yes 49266270
chr4 106028337 106028347 CEBPG JASPAR yes 49266271
chr4 106028337 106028347 CEBPB JASPAR yes 91798809
chr4 106028337 106028347 CEBPD JASPAR yes 91798810
chr4 106028337 106028347 CEBPE JASPAR yes 91798811
chr4 106028337 106028347 CEBPG JASPAR yes 91798812
chr4 106028338 106028346 GMEB2 JASPAR yes 49266272
chr4 106028338 106028346 GMEB2 JASPAR yes 91798813
chr4 106028338 106028349 NFIL3 JASPAR yes 49266273
chr4 106028338 106028349 NFIL3 JASPAR yes 91798814
chr4 106028341 106028357 RFX3 JASPAR yes 49266274
chr4 106028341 106028357 RFX4 JASPAR yes 49266275
chr4 106028341 106028357 RFX3 JASPAR yes 91798815
chr4 106028341 106028357 RFX4 JASPAR yes 91798816
chr4 106028343 106028346 MYB TRANSFAC yes 49266276
chr4 106028343 106028346 MYB TRANSFAC yes 91798817
chr4 106028350 106028356 HiNF-A TRANSFAC yes 49266277
chr4 106028350 106028356 HiNF-A TRANSFAC yes 91798818
chr4 106028352 106028373 IRF1 JASPAR yes 49266278
chr4 106028352 106028373 IRF1 JASPAR yes 91798819
chr4 106028360 106028375 STAT2 JASPAR yes 49266279
chr4 106028360 106028375 STAT2 JASPAR yes 91798820
chr4 106028361 106028375 STAT1 JASPAR yes 49266280
chr4 106028361 106028375 STAT1 JASPAR yes 91798821
chr4 106028362 106028373 ETV2 JASPAR yes 49266281
chr4 106028362 106028373 ETV2 JASPAR yes 91798822
chr4 106028372 106028393 REST JASPAR yes 49266282
chr4 106028372 106028393 REST JASPAR yes 91798823
chr4 106028380 106028390 NFATC3 JASPAR yes 49266283
chr4 106028380 106028390 NFATC3 JASPAR yes 91798824
chr4 106028382 106028389 NFATC2 JASPAR yes 49266284
chr4 106028382 106028389 NFATC2 JASPAR yes 91798825
chr4 106028391 106028402 STAT1 JASPAR yes 49266285
chr4 106028391 106028402 STAT3 JASPAR yes 49266286
chr4 106028391 106028402 STAT1 JASPAR yes 91798826
chr4 106028391 106028402 STAT3 JASPAR yes 91798827
chr4 106028417 106028438 IRF1 JASPAR yes 49266287
chr4 106028417 106028438 IRF1 JASPAR yes 91798828
chr4 106028420 106028424 YY1 TRANSFAC yes 49266288
chr4 106028420 106028424 YY1 TRANSFAC yes 91798829
chr4 106028426 106028430 NFE TRANSFAC yes 49266289
chr4 106028426 106028430 NFE TRANSFAC yes 91798830
chr4 106028446 106028456 SREBF2 JASPAR yes 49266290
chr4 106028446 106028456 SREBF2 JASPAR yes 91798831
chr4 106028452 106028464 PKNOX1 JASPAR yes 49266291
chr4 106028452 106028464 PKNOX2 JASPAR yes 49266292
chr4 106028452 106028464 TGIF1 JASPAR yes 49266293
chr4 106028452 106028464 PKNOX1 JASPAR yes 91798832
chr4 106028452 106028464 PKNOX2 JASPAR yes 91798833
chr4 106028452 106028464 TGIF1 JASPAR yes 91798834
chr4 106028473 106028482 PITX3 JASPAR yes 49266294
chr4 106028473 106028482 PITX3 JASPAR yes 91798835
chr4 106028473 106028483 GSC2 JASPAR yes 49266295
chr4 106028473 106028483 GSC JASPAR yes 49266296
chr4 106028473 106028483 GSC2 JASPAR yes 91798836
chr4 106028473 106028483 GSC JASPAR yes 91798837
chr4 106028474 106028482 OTX1 JASPAR yes 49266297
chr4 106028474 106028482 OTX2 JASPAR yes 49266298
chr4 106028474 106028482 OTX1 JASPAR yes 91798838
chr4 106028474 106028482 OTX2 JASPAR yes 91798839
chr4 106028494 106028512 SRF JASPAR yes 49266299
chr4 106028494 106028512 SRF JASPAR yes 91798840
chr4 106028497 106028503 NFIC JASPAR yes 49266300
chr4 106028497 106028503 NFIC JASPAR yes 91798841
chr4 106028503 106028509 SOX10 JASPAR yes 49266301
chr4 106028503 106028509 SOX10 JASPAR yes 91798842
chr4 106028505 106028516 DMRT3 JASPAR yes 49266302
chr4 106028505 106028516 DMRT3 JASPAR yes 91798843
chr4 106028509 106028512 MYB TRANSFAC yes 49266303
chr4 106028509 106028512 MYB TRANSFAC yes 91798844
chr4 106028509 106028518 SOX9 JASPAR yes 49266304
chr4 106028509 106028518 SOX9 JASPAR yes 91798845
SNP sites on vista45555[chr4:106028288-106028521]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr4 106028337 rs141367984 G A
ATF7 CEBPB CEBPD CEBPE CEBPG DBP HLF JDP2 NFIL3 TEF
7728016
chr4 106028352 rs200222168 GA G
HiNF-A IRF1 RFX3 RFX4
7728017
chr4 106028490 rs145144682 A G no 7728018
Genes possibly regulated by vista45555[chr4:106028288-106028521]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr4 106067032 106200973 + TET2 ENSG00000168769.8 106067032 0.8 0.99 4919 61489
Expression level of Genes
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miRNAs possibly regulated by vista45555[chr4:106028288-106028521]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results