EnhancerDB
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  3. vista45568[chr4:106382528-106382833]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista45568[chr4:106382528-106382833]
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Tissue distribution of vista45568
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Transcription factor that possibly regulate vista45568[chr4:106382528-106382833]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr4 106382410 106382868 GATA1 UCSC Txn Factor no Conserved 108533226
chr4 106382463 106382682 TEAD4 UCSC Txn Factor no Conserved 108533227
chr4 106382489 106382655 TAL1 UCSC Txn Factor no Conserved 108533228
chr4 106382553 106382561 GATA5 JASPAR yes 49267057
chr4 106382553 106382561 GATA5 JASPAR yes 91814766
chr4 106382560 106382571 E2F6 JASPAR yes 49267058
chr4 106382560 106382571 E2F6 JASPAR yes 91814767
chr4 106382570 106382590 RREB1 JASPAR yes 49267059
chr4 106382570 106382590 RREB1 JASPAR yes 91814768
chr4 106382573 106382577 ESR1 TRANSFAC yes 49267060
chr4 106382573 106382577 ESR1 TRANSFAC yes 91814769
chr4 106382576 106382581 MYC TRANSFAC yes 49267061
chr4 106382576 106382581 MYC TRANSFAC yes 91814770
chr4 106382589 106382604 RUNX2 JASPAR yes 49267062
chr4 106382589 106382604 RUNX2 JASPAR yes 91814771
chr4 106382590 106382599 RUNX2 JASPAR yes 49267063
chr4 106382590 106382599 RUNX2 JASPAR yes 91814772
chr4 106382590 106382600 RUNX3 JASPAR yes 49267064
chr4 106382590 106382600 RUNX3 JASPAR yes 91814773
chr4 106382590 106382601 RUNX1 JASPAR yes 49267065
chr4 106382590 106382601 RUNX1 JASPAR yes 91814774
chr4 106382601 106382607 MAZ TRANSFAC yes 49267066
chr4 106382601 106382607 MAZ TRANSFAC yes 91814775
chr4 106382606 106382610 LFA1 TRANSFAC yes 49267067
chr4 106382606 106382610 LFA1 TRANSFAC yes 91814776
chr4 106382610 106382623 SMAD2 JASPAR yes 49267068
chr4 106382610 106382623 SMAD2 JASPAR yes 91814777
chr4 106382619 106382634 IRF9 JASPAR yes 49267069
chr4 106382619 106382634 IRF9 JASPAR yes 91814778
chr4 106382669 106382673 YY1 TRANSFAC yes 49267070
chr4 106382669 106382673 YY1 TRANSFAC yes 91814779
chr4 106382674 106382689 TFAP2A JASPAR yes 49267071
chr4 106382674 106382689 TFAP2C JASPAR yes 49267072
chr4 106382674 106382689 TFAP2A JASPAR yes 91814780
chr4 106382674 106382689 TFAP2C JASPAR yes 91814781
chr4 106382682 106382687 ETS2 TRANSFAC yes 49267073
chr4 106382682 106382687 ETS2 TRANSFAC yes 91814782
chr4 106382705 106382720 PRDM1 JASPAR yes 49267074
chr4 106382705 106382720 PRDM1 JASPAR yes 91814783
chr4 106382719 106382723 TEAD2 TRANSFAC yes 49267075
chr4 106382719 106382723 TEAD2 TRANSFAC yes 91814784
chr4 106382736 106382750 SPIC JASPAR yes 49267076
chr4 106382736 106382750 SPIC JASPAR yes 91814785
chr4 106382740 106382746 MZF1 JASPAR yes 49267077
chr4 106382740 106382746 MZF1 JASPAR yes 91814786
SNP sites on vista45568[chr4:106382528-106382833]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr4 106382543 rs72952301 G A
GATA1 TAL1 TEAD4
7729256
chr4 106382550 rs568203643 C A
GATA1 TAL1 TEAD4
7729257
chr4 106382735 rs6831101 T G
GATA1
7729258
chr4 106382752 rs114974643 G A
GATA1
7729259
Genes possibly regulated by vista45568[chr4:106382528-106382833]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr4 106290234 106395238 - PPA2 ENSG00000138777.15 106395238 0.84 0.99 4920 87595
chr4 106473777 106629250 + ARHGEF38 ENSG00000236699.4 106473777 0.95 1.0 4921 9056
Expression level of Genes
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miRNAs possibly regulated by vista45568[chr4:106382528-106382833]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results