EnhancerDB
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  3. vista4559[chr1:201515368-201515617]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista4559[chr1:201515368-201515617]
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Tissue distribution of vista4559
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Transcription factor that possibly regulate vista4559[chr1:201515368-201515617]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr1 201515146 201515654 CTCF UCSC Txn Factor no Conserved 107856641
chr1 201515380 201515395 HNF4A JASPAR yes 34505197
chr1 201515380 201515395 HNF4A JASPAR yes 118432102
chr1 201515381 201515396 HNF4G JASPAR yes 34505198
chr1 201515381 201515396 HNF4G JASPAR yes 118432103
chr1 201515447 201515458 TBX2 JASPAR yes 34505199
chr1 201515447 201515458 TBX2 JASPAR yes 118432104
chr1 201515448 201515456 TBX15 JASPAR yes 34505200
chr1 201515448 201515456 TBX1 JASPAR yes 34505201
chr1 201515448 201515456 TBX4 JASPAR yes 34505202
chr1 201515448 201515456 TBX5 JASPAR yes 34505203
chr1 201515448 201515456 TBX15 JASPAR yes 118432105
chr1 201515448 201515456 TBX1 JASPAR yes 118432106
chr1 201515448 201515456 TBX4 JASPAR yes 118432107
chr1 201515448 201515456 TBX5 JASPAR yes 118432108
chr1 201515448 201515461 SMAD2 JASPAR yes 34505204
chr1 201515448 201515461 SMAD2 JASPAR yes 118432109
chr1 201515463 201515473 MZF1 JASPAR yes 34505205
chr1 201515463 201515473 MZF1 JASPAR yes 118432110
chr1 201515497 201515512 TFAP2A JASPAR yes 34505206
chr1 201515497 201515512 TFAP2C JASPAR yes 34505207
chr1 201515497 201515512 TFAP2A JASPAR yes 118432111
chr1 201515497 201515512 TFAP2C JASPAR yes 118432112
chr1 201515509 201515520 NRF1 JASPAR yes 34505208
chr1 201515509 201515520 NRF1 JASPAR yes 118432113
chr1 201515517 201515532 RFX5 JASPAR yes 34505209
chr1 201515517 201515532 RFX5 JASPAR yes 118432114
chr1 201515520 201515534 EBF1 JASPAR yes 34505210
chr1 201515520 201515534 EBF1 JASPAR yes 118432115
chr1 201515521 201515536 TFAP2C JASPAR yes 34505211
chr1 201515521 201515536 TFAP2C JASPAR yes 118432116
chr1 201515522 201515533 EBF1 JASPAR yes 34505212
chr1 201515522 201515533 EBF1 JASPAR yes 118432117
chr1 201515527 201515536 SP1 TRANSFAC yes 34505213
chr1 201515527 201515536 SP1 TRANSFAC yes 118432118
chr1 201515527 201515537 SP1 JASPAR yes 34505214
chr1 201515527 201515537 SP1 JASPAR yes 118432119
chr1 201515528 201515537 SP1 TRANSFAC yes 34505215
chr1 201515528 201515537 SP1 TRANSFAC yes 118432120
chr1 201515529 201515535 MAZ TRANSFAC yes 34505216
chr1 201515529 201515535 MAZ TRANSFAC yes 118432121
chr1 201515529 201515544 PRDM1 JASPAR yes 34505217
chr1 201515529 201515544 PRDM1 JASPAR yes 118432122
chr1 201515530 201515540 MZF1 JASPAR yes 34505218
chr1 201515530 201515540 MZF1 JASPAR yes 118432123
chr1 201515533 201515543 SP1 JASPAR yes 34505219
chr1 201515533 201515543 SP1 JASPAR yes 118432124
chr1 201515541 201515552 USF1 JASPAR yes 34505220
chr1 201515541 201515552 USF2 JASPAR yes 34505221
chr1 201515541 201515552 USF1 JASPAR yes 118432125
chr1 201515541 201515552 USF2 JASPAR yes 118432126
chr1 201515542 201515552 TFE3 JASPAR yes 34505222
chr1 201515542 201515552 TFEB JASPAR yes 34505223
chr1 201515542 201515552 TFEC JASPAR yes 34505224
chr1 201515542 201515552 TFE3 JASPAR yes 118432127
chr1 201515542 201515552 TFEB JASPAR yes 118432128
chr1 201515542 201515552 TFEC JASPAR yes 118432129
chr1 201515542 201515553 USF1 JASPAR yes 34505225
chr1 201515542 201515553 USF1 JASPAR yes 118432130
chr1 201515558 201515568 REL JASPAR yes 34505226
chr1 201515558 201515568 REL JASPAR yes 118432131
chr1 201515568 201515579 CEBPA JASPAR yes 34505227
chr1 201515568 201515579 CEBPA JASPAR yes 118432132
chr1 201515568 201515588 PPARG JASPAR yes 34505228
chr1 201515568 201515588 PPARG JASPAR yes 118432133
chr1 201515569 201515580 CEBPB JASPAR yes 34505229
chr1 201515569 201515580 CEBPB JASPAR yes 118432134
chr1 201515569 201515589 PPARG JASPAR yes 34505230
chr1 201515569 201515589 PPARG JASPAR yes 118432135
chr1 201515594 201515606 IRF1 JASPAR yes 34505231
chr1 201515594 201515606 IRF1 JASPAR yes 118432136
chr1 201515595 201515610 MEF2A JASPAR yes 34505232
chr1 201515595 201515610 MEF2A JASPAR yes 118432137
chr1 201515596 201515611 MEF2C JASPAR yes 34505233
chr1 201515596 201515611 MEF2C JASPAR yes 118432138
chr1 201515599 201515603 YY1 TRANSFAC yes 34505234
chr1 201515599 201515603 YY1 TRANSFAC yes 118432139
chr1 201515613 201515621 GATA1 TRANSFAC yes 34505235
chr1 201515613 201515621 GATA1 TRANSFAC yes 118432140
SNP sites on vista4559[chr1:201515368-201515617]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr1 201515517 rs115691980 C A
CTCF NRF1 RFX5
854976
Genes possibly regulated by vista4559[chr1:201515368-201515617]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr1 201434620 201438365 - PHLDA3 ENSG00000174307.5 201438365 0.73 1.0 1707 22997
chr1 201452658 201478584 - CSRP1 ENSG00000159176.9 201478584 0.86 0.99 1708 63216
chr1 201592013 201592738 + AC096677.1 ENSG00000269690.1 201592013 0.84 1.0 1709 23604
chr1 201592411 201796102 + NAV1 ENSG00000134369.11 201592411 0.79 1.0 1710 23206
Expression level of Genes
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miRNAs possibly regulated by vista4559[chr1:201515368-201515617]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results