EnhancerDB
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  3. vista45600[chr4:108821168-108821439]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista45600[chr4:108821168-108821439]
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Tissue distribution of vista45600
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Transcription factor that possibly regulate vista45600[chr4:108821168-108821439]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr4 108821170 108821186 SOX4 JASPAR yes 49268563
chr4 108821214 108821229 FOXP1 JASPAR yes 49268564
chr4 108821216 108821228 FOXC2 JASPAR yes 49268565
chr4 108821217 108821228 FOXP2 JASPAR yes 49268566
chr4 108821218 108821222 TEAD2 TRANSFAC yes 49268567
chr4 108821218 108821223 TBP TRANSFAC yes 49268568
chr4 108821219 108821227 FOXG1 JASPAR yes 49268569
chr4 108821219 108821227 FOXO3 JASPAR yes 49268570
chr4 108821221 108821237 SOX4 JASPAR yes 49268571
chr4 108821237 108821248 USF1 JASPAR yes 49268572
chr4 108821237 108821248 USF2 JASPAR yes 49268573
chr4 108821238 108821248 TFEB JASPAR yes 49268574
chr4 108821238 108821248 TFEC JASPAR yes 49268575
chr4 108821247 108821253 GATA1 TRANSFAC yes 49268576
chr4 108821253 108821263 SREBF1 JASPAR yes 49268577
chr4 108821253 108821263 SREBF2 JASPAR yes 49268578
chr4 108821253 108821263 TFEB JASPAR yes 49268579
chr4 108821253 108821264 USF2 JASPAR yes 49268580
chr4 108821256 108821273 RARA JASPAR yes 49268581
chr4 108821256 108821273 RXRA JASPAR yes 49268582
chr4 108821264 108821274 SREBF1 JASPAR yes 49268583
chr4 108821264 108821274 SREBF2 JASPAR yes 49268584
chr4 108821264 108821274 TFEB JASPAR yes 49268585
chr4 108821264 108821275 USF2 JASPAR yes 49268586
chr4 108821297 108821303 JUN TRANSFAC yes 49268587
chr4 108821300 108821315 PRDM1 JASPAR yes 49268588
chr4 108821301 108821316 LEF1 JASPAR yes 49268589
chr4 108821301 108821316 NR2C2 JASPAR yes 49268590
chr4 108821302 108821316 RXRB JASPAR yes 49268591
chr4 108821302 108821316 RXRG JASPAR yes 49268592
chr4 108821314 108821325 TFAP2A JASPAR yes 49268593
chr4 108821327 108821331 YY1 TRANSFAC yes 49268594
chr4 108821328 108821345 RARA JASPAR yes 49268595
chr4 108821335 108821345 RORA JASPAR yes 49268596
chr4 108821336 108821349 NR2F1 JASPAR yes 49268597
chr4 108821337 108821355 ESR1 JASPAR yes 49268598
chr4 108821339 108821354 ESR2 JASPAR yes 49268599
chr4 108821340 108821344 ESR1 TRANSFAC yes 49268600
chr4 108821361 108821364 MYB TRANSFAC yes 49268601
chr4 108821369 108821373 YY1 TRANSFAC yes 49268602
chr4 108821374 108821378 LFA1 TRANSFAC yes 49268603
chr4 108821386 108821399 ELF1 JASPAR yes 49268604
chr4 108821387 108821399 EHF JASPAR yes 49268605
chr4 108821387 108821399 ELF1 JASPAR yes 49268606
chr4 108821387 108821399 ELF4 JASPAR yes 49268607
chr4 108821387 108821400 ELF3 JASPAR yes 49268608
chr4 108821388 108821399 ELF5 JASPAR yes 49268609
chr4 108821390 108821395 ETS2 TRANSFAC yes 49268610
chr4 108821390 108821398 FEV JASPAR yes 49268611
chr4 108821391 108821398 SPI1 JASPAR yes 49268612
chr4 108821401 108821411 MAX JASPAR yes 49268613
SNP sites on vista45600[chr4:108821168-108821439]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr4 108821231 rs6835162 C G
SOX4
7737212
chr4 108821352 rs28540030 C G
ESR1 ESR2
7737213
chr4 108821436 rs10516548 A G no 7737214
Genes possibly regulated by vista45600[chr4:108821168-108821439]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr4 108745719 108836203 + SGMS2 ENSG00000164023.10 108745719 0.89 1.0 4929 24551
chr4 108852525 108874613 + CYP2U1 ENSG00000155016.13 108852525 0.93 0.99 4930 68914
chr4 108910870 108956331 + HADH ENSG00000138796.11 108910870 0.74 0.99 4931 10569
Expression level of Genes
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miRNAs possibly regulated by vista45600[chr4:108821168-108821439]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results