EnhancerDB
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  3. vista45603[chr4:109001369-109002122]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista45603[chr4:109001369-109002122]
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Tissue distribution of vista45603
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Transcription factor that possibly regulate vista45603[chr4:109001369-109002122]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr4 109001369 109001375 NFIC JASPAR yes 49268662
chr4 109001402 109001412 HOXA13 JASPAR yes 49268663
chr4 109001403 109001407 YY1 TRANSFAC yes 49268664
chr4 109001406 109001412 TBP TRANSFAC yes 49268665
chr4 109001413 109001428 MEF2C JASPAR yes 49268666
chr4 109001414 109001429 MEF2A JASPAR yes 49268667
chr4 109001423 109001428 GATA2 JASPAR yes 49268668
chr4 109001424 109001430 ZNF354C JASPAR yes 49268669
chr4 109001429 109001449 RREB1 JASPAR yes 49268670
chr4 109001441 109001447 SOX10 JASPAR yes 49268671
chr4 109001445 109001456 E2F6 JASPAR yes 49268672
chr4 109001471 109001486 FOXP1 JASPAR yes 49268673
chr4 109001478 109001496 NR3C1 JASPAR yes 49268674
chr4 109001486 109001490 YY1 TRANSFAC yes 49268675
chr4 109001509 109001521 POU3F2 JASPAR yes 49268676
chr4 109001515 109001520 GATA2 JASPAR yes 49268677
chr4 109001524 109001542 NR3C1 JASPAR yes 49268678
chr4 109001530 109001542 IRF1 JASPAR yes 49268679
chr4 109001550 109001564 FOXF2 JASPAR yes 49268680
chr4 109001551 109001562 FOXA1 JASPAR yes 49268681
chr4 109001551 109001566 FOXA1 JASPAR yes 49268682
chr4 109001552 109001563 FOXB1 JASPAR yes 49268683
chr4 109001552 109001563 FOXC1 JASPAR yes 49268684
chr4 109001552 109001564 FOXC2 JASPAR yes 49268685
chr4 109001553 109001564 FOXP2 JASPAR yes 49268686
chr4 109001554 109001569 HNF1A JASPAR yes 49268687
chr4 109001555 109001562 FOXD2 JASPAR yes 49268688
chr4 109001555 109001562 FOXI1 JASPAR yes 49268689
chr4 109001555 109001562 FOXL1 JASPAR yes 49268690
chr4 109001555 109001562 FOXO4 JASPAR yes 49268691
chr4 109001555 109001562 FOXO6 JASPAR yes 49268692
chr4 109001555 109001562 FOXP3 JASPAR yes 49268693
chr4 109001555 109001563 FOXD1 JASPAR yes 49268694
chr4 109001555 109001563 FOXG1 JASPAR yes 49268695
chr4 109001555 109001563 FOXO3 JASPAR yes 49268696
chr4 109001560 109001564 YY1 TRANSFAC yes 49268697
chr4 109001609 109001617 BARX1 JASPAR yes 49268698
chr4 109001610 109001620 PAX3 JASPAR yes 49268699
chr4 109001613 109001628 PRDM1 JASPAR yes 49268700
chr4 109001613 109001628 STAT2 JASPAR yes 49268701
chr4 109001614 109001628 STAT1 JASPAR yes 49268702
chr4 109001615 109001629 IRF7 JASPAR yes 49268703
chr4 109001616 109001624 FEV JASPAR yes 49268704
chr4 109001618 109001623 ETS2 TRANSFAC yes 49268705
chr4 109001623 109001634 STAT3 JASPAR yes 49268706
chr4 109001631 109001636 ETS2 TRANSFAC yes 49268707
chr4 109001645 109001650 GATA2 JASPAR yes 49268708
chr4 109001652 109001656 YY1 TRANSFAC yes 49268709
chr4 109001681 109001686 ETS2 TRANSFAC yes 49268710
chr4 109001689 109001704 MEF2C JASPAR yes 49268711
chr4 109001690 109001705 MEF2A JASPAR yes 49268712
chr4 109001698 109001710 FOXI1 JASPAR yes 49268713
chr4 109001705 109001709 YY1 TRANSFAC yes 49268714
chr4 109001725 109001731 TCF4 TRANSFAC yes 49268715
chr4 109001731 109001742 PROP1 JASPAR yes 49268716
chr4 109001764 109001777 POU2F2 JASPAR yes 49268717
chr4 109001766 109001770 YY1 TRANSFAC yes 49268718
chr4 109001784 109001788 NFE TRANSFAC yes 49268719
chr4 109001792 109001798 GATA3 JASPAR yes 49268720
chr4 109001817 109001821 TEAD2 TRANSFAC yes 49268721
chr4 109001817 109001822 TBP TRANSFAC yes 49268722
chr4 109001817 109001823 TFIID TRANSFAC yes 49268723
chr4 109001817 109001828 FOXC1 JASPAR yes 49268724
chr4 109001820 109001832 BHLHE23 JASPAR yes 49268725
chr4 109001821 109001831 OLIG1 JASPAR yes 49268726
chr4 109001821 109001831 OLIG2 JASPAR yes 49268727
chr4 109001821 109001831 OLIG3 JASPAR yes 49268728
chr4 109001836 109001841 ETS2 TRANSFAC yes 49268729
chr4 109001841 109001846 GATA2 JASPAR yes 49268730
chr4 109001856 109001866 SP1 JASPAR yes 49268731
chr4 109001875 109001879 YY1 TRANSFAC yes 49268732
chr4 109001885 109001906 IRF1 JASPAR yes 49268733
chr4 109001889 109001904 PRDM1 JASPAR yes 49268734
chr4 109001889 109001904 STAT2 JASPAR yes 49268735
chr4 109001918 109001933 RUNX2 JASPAR yes 49268736
chr4 109001927 109001941 NR2F1 JASPAR yes 49268737
chr4 109001944 109001956 SRF JASPAR yes 49268738
chr4 109001949 109001953 TEAD2 TRANSFAC yes 49268739
chr4 109001949 109001954 TBP TRANSFAC yes 49268740
chr4 109001949 109001955 TFIID TRANSFAC yes 49268741
chr4 109001951 109001957 TBP TRANSFAC yes 49268742
chr4 109001967 109001979 GRHL1 JASPAR yes 49268743
chr4 109001979 109001982 MYB TRANSFAC yes 49268744
chr4 109001987 109002001 STAT1 JASPAR yes 49268745
chr4 109001988 109002000 IRF1 JASPAR yes 49268746
chr4 109001992 109002003 ELK4 JASPAR yes 49268747
chr4 109001992 109002003 FLI1 JASPAR yes 49268748
chr4 109001992 109002005 ELF3 JASPAR yes 49268749
chr4 109001993 109002003 ELK1 JASPAR yes 49268750
chr4 109001993 109002003 ELK3 JASPAR yes 49268751
chr4 109001993 109002003 ERF JASPAR yes 49268752
chr4 109001993 109002003 ERG JASPAR yes 49268753
chr4 109001993 109002003 ETS1 JASPAR yes 49268754
chr4 109001993 109002003 ETV1 JASPAR yes 49268755
chr4 109001993 109002003 ETV3 JASPAR yes 49268756
chr4 109001993 109002003 ETV4 JASPAR yes 49268757
chr4 109001993 109002003 ETV5 JASPAR yes 49268758
chr4 109001993 109002003 ETV6 JASPAR yes 49268759
chr4 109001993 109002003 FEV JASPAR yes 49268760
chr4 109001993 109002003 FLI1 JASPAR yes 49268761
chr4 109001993 109002003 GABPA JASPAR yes 49268762
chr4 109001993 109002004 ELF5 JASPAR yes 49268763
chr4 109001993 109002005 EHF JASPAR yes 49268764
chr4 109001993 109002005 ELF1 JASPAR yes 49268765
chr4 109001993 109002005 ELF4 JASPAR yes 49268766
chr4 109001993 109002006 ELF1 JASPAR yes 49268767
chr4 109001994 109002002 FEV JASPAR yes 49268768
chr4 109001994 109002003 ELK4 JASPAR yes 49268769
chr4 109001995 109002001 ETS1 JASPAR yes 49268770
chr4 109001995 109002001 SPI1 JASPAR yes 49268771
chr4 109001995 109002005 ELK1 JASPAR yes 49268772
chr4 109002024 109002030 SOX10 JASPAR yes 49268773
chr4 109002026 109002041 RUNX2 JASPAR yes 49268774
chr4 109002045 109002058 ATF4 JASPAR yes 49268775
chr4 109002074 109002095 REST JASPAR yes 49268776
chr4 109002077 109002097 ESR1 JASPAR yes 49268777
chr4 109002080 109002098 ESR2 JASPAR yes 49268778
chr4 109002081 109002098 ESR1 JASPAR yes 49268779
chr4 109002081 109002099 ESR2 JASPAR yes 49268780
chr4 109002082 109002096 TLX1 JASPAR yes 49268781
chr4 109002082 109002097 ESR2 JASPAR yes 49268782
chr4 109002082 109002102 ESR1 JASPAR yes 49268783
chr4 109002083 109002087 LFA1 TRANSFAC yes 49268784
chr4 109002083 109002097 TLX1 JASPAR yes 49268785
chr4 109002092 109002098 YY1 JASPAR yes 49268786
chr4 109002104 109002116 IRF1 JASPAR yes 49268787
SNP sites on vista45603[chr4:109001369-109002122]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr4 109001402 rs190366491 A G
HOXA13
7738075
chr4 109001404 rs3796995 C T
HOXA13 YY1
7738076
chr4 109001408 rs182968372 A T
HOXA13 TBP
7738077
chr4 109001553 rs79769579 A G
FOXA1 FOXB1 FOXC1 FOXC2 FOXF2 FOXP2
7738078
chr4 109001694 rs560268847 TA T
MEF2A MEF2C
7738079
chr4 109001695 rs3796996 A G
MEF2A MEF2C
7738080
chr4 109001745 rs552520251 T C no 7738081
chr4 109002009 rs372599238 A G no 7738082
Genes possibly regulated by vista45603[chr4:109001369-109002122]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr4 108910870 108956331 + HADH ENSG00000138796.11 108910870 0.74 0.99 4931 9501
chr4 108968701 109090112 - LEF1 ENSG00000138795.5 109090112 0.99 0.96 4932 12010
Expression level of Genes
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miRNAs possibly regulated by vista45603[chr4:109001369-109002122]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results