EnhancerDB
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  3. vista45620[chr4:110125324-110125640]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista45620[chr4:110125324-110125640]
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Tissue distribution of vista45620
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Transcription factor that possibly regulate vista45620[chr4:110125324-110125640]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr4 110125386 110125390 YY1 TRANSFAC yes 49269388
chr4 110125392 110125406 TCF7L2 JASPAR yes 49269389
chr4 110125392 110125407 LEF1 JASPAR yes 49269390
chr4 110125396 110125402 TCF1 TRANSFAC yes 49269391
chr4 110125400 110125405 ETS2 TRANSFAC yes 49269392
chr4 110125413 110125418 GATA2 JASPAR yes 49269393
chr4 110125452 110125466 RXRB JASPAR yes 49269394
chr4 110125452 110125466 RXRG JASPAR yes 49269395
chr4 110125452 110125467 HNF4G JASPAR yes 49269396
chr4 110125462 110125466 YY1 TRANSFAC yes 49269397
chr4 110125470 110125484 GATA2 JASPAR yes 49269398
chr4 110125475 110125489 IRF8 JASPAR yes 49269399
chr4 110125475 110125490 IRF9 JASPAR yes 49269400
chr4 110125488 110125492 YY1 TRANSFAC yes 49269401
chr4 110125491 110125495 TEAD2 TRANSFAC yes 49269402
chr4 110125528 110125533 ETS2 TRANSFAC yes 49269403
chr4 110125541 110125556 RUNX2 JASPAR yes 49269404
chr4 110125562 110125574 E2F8 JASPAR yes 49269405
chr4 110125563 110125569 ETS1 JASPAR yes 49269406
chr4 110125566 110125571 SP1 TRANSFAC yes 49269407
chr4 110125586 110125606 PPARG JASPAR yes 49269408
chr4 110125587 110125597 NFATC3 JASPAR yes 49269409
chr4 110125589 110125596 NFATC2 JASPAR yes 49269410
chr4 110125593 110125605 YY1 JASPAR yes 49269411
chr4 110125605 110125609 TEAD2 TRANSFAC yes 49269412
chr4 110125620 110125630 HOXA13 JASPAR yes 49269413
chr4 110125620 110125630 HOXD13 JASPAR yes 49269414
chr4 110125620 110125631 HOXA10 JASPAR yes 49269415
chr4 110125621 110125630 CDX1 JASPAR yes 49269416
chr4 110125621 110125632 CDX2 JASPAR yes 49269417
SNP sites on vista45620[chr4:110125324-110125640]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr4 110125326 rs80060180 A G no 7743033
chr4 110125383 rs192551506 A G no 7743034
chr4 110125487 rs77374570 C T
IRF8 IRF9
7743035
chr4 110125500 rs75822493 G C no 7743036
chr4 110125520 rs75444524 C T no 7743037
chr4 110125576 rs76611547 T A,C,G no 7743038
chr4 110125587 rs80031439 A G
NFATC3 PPARG
7743039
Genes possibly regulated by vista45620[chr4:110125324-110125640]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr4 109731877 110223813 - COL25A1 ENSG00000188517.10 110223813 0.95 0.92 4936 1827
Expression level of Genes
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miRNAs possibly regulated by vista45620[chr4:110125324-110125640]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results