EnhancerDB
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  3. vista45665[chr4:113572868-113573168]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista45665[chr4:113572868-113573168]
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Tissue distribution of vista45665
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Transcription factor that possibly regulate vista45665[chr4:113572868-113573168]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr4 113572876 113572887 USF1 JASPAR yes 49271429
chr4 113572876 113572887 USF2 JASPAR yes 49271430
chr4 113572877 113572887 MAX JASPAR yes 49271431
chr4 113572892 113572902 NOTO JASPAR yes 49271432
chr4 113572939 113572949 GSC JASPAR yes 49271433
chr4 113572940 113572957 ESR1 JASPAR yes 49271434
chr4 113572940 113572958 ESR2 JASPAR yes 49271435
chr4 113572941 113572956 ESR2 JASPAR yes 49271436
chr4 113572953 113572957 YY1 TRANSFAC yes 49271437
chr4 113572956 113572960 TEAD2 TRANSFAC yes 49271438
chr4 113572962 113572967 GATA2 JASPAR yes 49271439
chr4 113572962 113572974 FOXI1 JASPAR yes 49271440
chr4 113572965 113572969 YY1 TRANSFAC yes 49271441
chr4 113572992 113573008 POU4F2 JASPAR yes 49271442
chr4 113572993 113573003 PAX7 JASPAR yes 49271443
chr4 113572993 113573004 PHOX2A JASPAR yes 49271444
chr4 113572995 113573000 MYB TRANSFAC yes 49271445
chr4 113573014 113573025 CDX2 JASPAR yes 49271446
chr4 113573015 113573026 HOXA10 JASPAR yes 49271447
chr4 113573016 113573026 HOXD13 JASPAR yes 49271448
chr4 113573018 113573022 TEAD2 TRANSFAC yes 49271449
chr4 113573018 113573023 TBP TRANSFAC yes 49271450
chr4 113573018 113573024 TFIID TRANSFAC yes 49271451
chr4 113573023 113573033 POU6F2 JASPAR yes 49271452
chr4 113573027 113573031 YY1 TRANSFAC yes 49271453
chr4 113573057 113573073 SOX8 JASPAR yes 49271454
chr4 113573083 113573101 SRF JASPAR yes 49271455
chr4 113573095 113573110 HNF1A JASPAR yes 49271456
chr4 113573096 113573109 HNF1B JASPAR yes 49271457
chr4 113573097 113573109 HNF1B JASPAR yes 49271458
chr4 113573098 113573108 POU6F2 JASPAR yes 49271459
chr4 113573099 113573109 ALX3 JASPAR yes 49271460
chr4 113573099 113573109 EMX1 JASPAR yes 49271461
chr4 113573099 113573109 EMX2 JASPAR yes 49271462
chr4 113573099 113573109 EN2 JASPAR yes 49271463
chr4 113573099 113573109 ESX1 JASPAR yes 49271464
chr4 113573099 113573109 EVX1 JASPAR yes 49271465
chr4 113573099 113573109 EVX2 JASPAR yes 49271466
chr4 113573099 113573109 GBX1 JASPAR yes 49271467
chr4 113573099 113573109 GBX2 JASPAR yes 49271468
chr4 113573099 113573109 GSX1 JASPAR yes 49271469
chr4 113573099 113573109 GSX2 JASPAR yes 49271470
chr4 113573099 113573109 HESX1 JASPAR yes 49271471
chr4 113573099 113573109 HOXA2 JASPAR yes 49271472
chr4 113573099 113573109 HOXB2 JASPAR yes 49271473
chr4 113573099 113573109 HOXB3 JASPAR yes 49271474
chr4 113573099 113573109 LBX2 JASPAR yes 49271475
chr4 113573099 113573109 LHX2 JASPAR yes 49271476
chr4 113573099 113573109 LHX6 JASPAR yes 49271477
chr4 113573099 113573109 MEOX1 JASPAR yes 49271478
chr4 113573099 113573109 MEOX2 JASPAR yes 49271479
chr4 113573099 113573109 MIXL1 JASPAR yes 49271480
chr4 113573099 113573109 MNX1 JASPAR yes 49271481
chr4 113573099 113573109 NOTO JASPAR yes 49271482
chr4 113573099 113573109 POU6F1 JASPAR yes 49271483
chr4 113573099 113573109 RAX JASPAR yes 49271484
chr4 113573100 113573108 BSX JASPAR yes 49271485
chr4 113573100 113573108 DLX6 JASPAR yes 49271486
chr4 113573100 113573108 EN1 JASPAR yes 49271487
chr4 113573100 113573108 ISX JASPAR yes 49271488
chr4 113573100 113573108 LBX1 JASPAR yes 49271489
chr4 113573100 113573108 LHX9 JASPAR yes 49271490
chr4 113573100 113573108 LMX1A JASPAR yes 49271491
chr4 113573100 113573108 LMX1B JASPAR yes 49271492
chr4 113573100 113573108 NKX6-1 JASPAR yes 49271493
chr4 113573100 113573108 NKX6-2 JASPAR yes 49271494
chr4 113573100 113573108 PAX4 JASPAR yes 49271495
chr4 113573100 113573108 PDX1 JASPAR yes 49271496
chr4 113573100 113573108 PRRX1 JASPAR yes 49271497
chr4 113573100 113573108 RAX2 JASPAR yes 49271498
chr4 113573100 113573108 SHOX JASPAR yes 49271499
chr4 113573100 113573108 UNCX JASPAR yes 49271500
chr4 113573100 113573108 VAX1 JASPAR yes 49271501
chr4 113573100 113573108 VAX2 JASPAR yes 49271502
chr4 113573100 113573108 VSX1 JASPAR yes 49271503
chr4 113573100 113573108 VSX2 JASPAR yes 49271504
chr4 113573100 113573116 POU4F2 JASPAR yes 49271505
chr4 113573103 113573113 HMBOX1 JASPAR yes 49271506
chr4 113573103 113573117 RORA JASPAR yes 49271507
chr4 113573104 113573112 LBX1 JASPAR yes 49271508
chr4 113573105 113573108 MYB TRANSFAC yes 49271509
chr4 113573122 113573127 ETS2 TRANSFAC yes 49271510
chr4 113573147 113573168 IRF1 JASPAR yes 49271511
chr4 113573149 113573164 STAT2 JASPAR yes 49271512
chr4 113573150 113573164 STAT1 JASPAR yes 49271513
chr4 113573152 113573167 FOXP1 JASPAR yes 49271514
chr4 113573153 113573168 FOXP1 JASPAR yes 49271515
SNP sites on vista45665[chr4:113572868-113573168]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr4 113573022 rs80256256 A G
CDX2 HOXA10 HOXD13 TBP TEAD2 TFIID
7755007
chr4 113573052 rs62317771 A G no 7755008
chr4 113573101 rs79120679 C A
ALX3 BSX DLX6 EMX1 EMX2 EN1 EN2 ESX1 EVX1 EVX2 GBX1 GBX2 GSX1 GSX2 HESX1 HNF1A HNF1B HOXA2 HOXB2 HOXB3 ISX LBX1 LBX2 LHX2 LHX6 LHX9 LMX1A LMX1B MEOX1 MEOX2 MIXL1 MNX1 NKX6-1 NKX6-2 NOTO PAX4 PDX1 POU4F2 POU6F1 POU6F2 PRRX1 RAX RAX2 SHOX SRF UNCX VAX1 VAX2 VSX1 VSX2
7755009
Genes possibly regulated by vista45665[chr4:113572868-113573168]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr4 113460492 113558151 - C4orf21 ENSG00000138658.11 113558151 0.84 0.99 4954 85283
chr4 113558120 113578748 + LARP7 ENSG00000174720.11 113558120 0.73 0.99 4955 85252
Expression level of Genes
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miRNAs possibly regulated by vista45665[chr4:113572868-113573168]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
chr4 113569033 113569054 - hsa-miR-367-3p MIMAT0000719 113569854 0.021796259081774617 0.0 0.0 1255
chr4 113569162 113569184 - hsa-miR-302d-3p MIMAT0000718 113569854 0.021796259081774617 0.916667 0.0 1257
chr4 113569342 113569364 - hsa-miR-302a-3p MIMAT0000684 113569854 0.021796259081774617 0.916654 0.0 1259
chr4 113569522 113569544 - hsa-miR-302c-3p MIMAT0000717 113569854 0.021796259081774617 0.916667 0.0 1261
chr4 113569645 113569667 - hsa-miR-302b-3p MIMAT0000715 113569854 0.021796259081774617 0.916667 0.0 1263
Expression level of miRNAs
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