EnhancerDB
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  3. vista45721[chr4:119890642-119890944]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista45721[chr4:119890642-119890944]
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Tissue distribution of vista45721
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Transcription factor that possibly regulate vista45721[chr4:119890642-119890944]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr4 119890411 119890835 RPC155 UCSC Txn Factor no Conserved 108533315
chr4 119890431 119890866 CTCF UCSC Txn Factor no Conserved 108533316
chr4 119890460 119890870 TBP UCSC Txn Factor no Conserved 108533317
chr4 119890490 119890772 SMC3 UCSC Txn Factor no Conserved 108533318
chr4 119890501 119890768 RAD21 UCSC Txn Factor no Conserved 108533319
chr4 119890622 119890643 ZNF263 JASPAR yes 49274049
chr4 119890622 119890643 ZNF263 JASPAR yes 92361144
chr4 119890624 119890643 CTCF JASPAR yes 49274050
chr4 119890624 119890643 CTCF JASPAR yes 92361145
chr4 119890646 119890657 TBX20 JASPAR yes 49274051
chr4 119890646 119890657 TBX20 JASPAR yes 92361146
chr4 119890647 119890655 TBX5 JASPAR yes 49274052
chr4 119890647 119890655 TBX5 JASPAR yes 92361147
chr4 119890656 119890663 E2F1 TRANSFAC yes 49274053
chr4 119890656 119890663 E2F1 TRANSFAC yes 92361148
chr4 119890670 119890675 GATA2 JASPAR yes 49274054
chr4 119890670 119890675 GATA2 JASPAR yes 92361149
chr4 119890692 119890708 SRF JASPAR yes 49274055
chr4 119890692 119890708 SRF JASPAR yes 92361150
chr4 119890692 119890710 SRF JASPAR yes 49274056
chr4 119890692 119890710 SRF JASPAR yes 92361151
chr4 119890695 119890707 SRF JASPAR yes 49274057
chr4 119890695 119890707 SRF JASPAR yes 92361152
chr4 119890696 119890700 YY1 TRANSFAC yes 49274058
chr4 119890696 119890700 YY1 TRANSFAC yes 92361153
chr4 119890703 119890707 ESR1 TRANSFAC yes 49274059
chr4 119890703 119890707 ESR1 TRANSFAC yes 92361154
chr4 119890746 119890750 NFE TRANSFAC yes 49274060
chr4 119890746 119890750 NFE TRANSFAC yes 92361155
chr4 119890746 119890751 GATA1 TRANSFAC yes 49274061
chr4 119890746 119890751 GATA1 TRANSFAC yes 92361156
chr4 119890746 119890752 GATA3 JASPAR yes 49274062
chr4 119890746 119890752 GATA3 JASPAR yes 92361157
chr4 119890754 119890764 NFATC3 JASPAR yes 49274063
chr4 119890754 119890764 NFATC3 JASPAR yes 92361158
chr4 119890756 119890763 NFATC2 JASPAR yes 49274064
chr4 119890756 119890763 NFATC2 JASPAR yes 92361159
chr4 119890756 119890767 NFKB1 JASPAR yes 49274065
chr4 119890756 119890767 NFKB1 JASPAR yes 92361160
chr4 119890757 119890767 NFKB1 JASPAR yes 49274066
chr4 119890757 119890767 RELA JASPAR yes 49274067
chr4 119890757 119890767 REL JASPAR yes 49274068
chr4 119890757 119890767 NFKB1 JASPAR yes 92361161
chr4 119890757 119890767 RELA JASPAR yes 92361162
chr4 119890757 119890767 REL JASPAR yes 92361163
chr4 119890757 119890768 NFKB1 JASPAR yes 49274069
chr4 119890757 119890768 NFKB1 JASPAR yes 92361164
chr4 119890758 119890768 REL JASPAR yes 49274070
chr4 119890758 119890768 REL JASPAR yes 92361165
chr4 119890775 119890791 NFYA JASPAR yes 49274071
chr4 119890775 119890791 NFYA JASPAR yes 92361166
chr4 119890780 119890784 H1TF2 TRANSFAC yes 49274072
chr4 119890780 119890784 NFE TRANSFAC yes 49274073
chr4 119890780 119890784 SRF TRANSFAC yes 49274074
chr4 119890780 119890784 H1TF2 TRANSFAC yes 92361167
chr4 119890780 119890784 NFE TRANSFAC yes 92361168
chr4 119890780 119890784 SRF TRANSFAC yes 92361169
chr4 119890784 119890798 TLX1 JASPAR yes 49274075
chr4 119890784 119890798 TLX1 JASPAR yes 92361170
chr4 119890800 119890815 AR JASPAR yes 49274076
chr4 119890800 119890815 AR JASPAR yes 92361171
chr4 119890811 119890828 PAX1 JASPAR yes 49274077
chr4 119890811 119890828 PAX1 JASPAR yes 92361172
chr4 119890845 119890855 HOXD13 JASPAR yes 49274078
chr4 119890845 119890855 HOXD13 JASPAR yes 92361173
chr4 119890872 119890876 TEAD2 TRANSFAC yes 49274079
chr4 119890872 119890876 TEAD2 TRANSFAC yes 92361174
chr4 119890872 119890882 RORA JASPAR yes 49274080
chr4 119890872 119890882 RORA JASPAR yes 92361175
chr4 119890875 119890883 NR4A2 JASPAR yes 49274081
chr4 119890875 119890883 NR4A2 JASPAR yes 92361176
chr4 119890877 119890881 ESR1 TRANSFAC yes 49274082
chr4 119890877 119890881 ESR1 TRANSFAC yes 92361177
chr4 119890886 119890901 MEF2C JASPAR yes 49274083
chr4 119890886 119890901 MEF2C JASPAR yes 92361178
chr4 119890887 119890900 POU2F2 JASPAR yes 49274084
chr4 119890887 119890900 POU2F2 JASPAR yes 92361179
chr4 119890894 119890904 MSC JASPAR yes 49274085
chr4 119890894 119890904 MSC JASPAR yes 92361180
chr4 119890900 119890915 MEF2C JASPAR yes 49274086
chr4 119890900 119890915 MEF2C JASPAR yes 92361181
chr4 119890903 119890907 YY1 TRANSFAC yes 49274087
chr4 119890903 119890907 YY1 TRANSFAC yes 92361182
chr4 119890920 119890941 IRF1 JASPAR yes 49274088
chr4 119890920 119890941 IRF1 JASPAR yes 92361183
chr4 119890922 119890937 STAT2 JASPAR yes 49274089
chr4 119890922 119890937 STAT2 JASPAR yes 92361184
chr4 119890925 119890940 FOXP1 JASPAR yes 49274090
chr4 119890925 119890940 FOXP1 JASPAR yes 92361185
chr4 119890926 119890941 FOXP1 JASPAR yes 49274091
chr4 119890926 119890941 FOXP1 JASPAR yes 92361186
chr4 119890927 119890942 FOXP1 JASPAR yes 49274092
chr4 119890927 119890942 FOXP1 JASPAR yes 92361187
chr4 119890930 119890945 MEF2C JASPAR yes 49274093
chr4 119890930 119890945 MEF2C JASPAR yes 92361188
SNP sites on vista45721[chr4:119890642-119890944]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr4 119890658 rs78366160 C A,T
CTCF E2F1 RAD21 RPC155 SMC3 TBP
7774826
chr4 119890772 rs1038771 A G
CTCF RPC155 SMC3 TBP
7774827
chr4 119890865 rs17050208 G A
CTCF TBP
7774828
chr4 119890926 rs577745968 G GT
FOXP1 IRF1 STAT2
7774829
Genes possibly regulated by vista45721[chr4:119890642-119890944]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr4 119809996 119982402 + SYNPO2 ENSG00000172403.6 119809996 0.97 0.94 4967 19354
Expression level of Genes
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miRNAs possibly regulated by vista45721[chr4:119890642-119890944]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results