EnhancerDB
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  3. vista45732[chr4:120049398-120049695]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista45732[chr4:120049398-120049695]
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Tissue distribution of vista45732
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Transcription factor that possibly regulate vista45732[chr4:120049398-120049695]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr4 120049428 120049436 FOXL1 JASPAR yes 49274626
chr4 120049441 120049445 YY1 TRANSFAC yes 49274627
chr4 120049443 120049451 E2F1 JASPAR yes 49274628
chr4 120049452 120049469 RXRA JASPAR yes 49274629
chr4 120049462 120049468 ZNF354C JASPAR yes 49274630
chr4 120049468 120049482 GATA2 JASPAR yes 49274631
chr4 120049472 120049480 GATA3 JASPAR yes 49274632
chr4 120049472 120049480 GATA5 JASPAR yes 49274633
chr4 120049491 120049495 YY1 TRANSFAC yes 49274634
chr4 120049513 120049517 YY1 TRANSFAC yes 49274635
chr4 120049542 120049556 RORA JASPAR yes 49274636
chr4 120049543 120049553 RORA JASPAR yes 49274637
chr4 120049553 120049562 NFIX JASPAR yes 49274638
chr4 120049553 120049563 NFIA JASPAR yes 49274639
chr4 120049553 120049568 TP53 JASPAR yes 49274640
chr4 120049555 120049561 NFIC JASPAR yes 49274641
chr4 120049561 120049572 USF1 JASPAR yes 49274642
chr4 120049563 120049576 NR2F1 JASPAR yes 49274643
chr4 120049565 120049576 ESRRA JASPAR yes 49274644
chr4 120049566 120049574 NR4A2 JASPAR yes 49274645
chr4 120049567 120049577 RORA JASPAR yes 49274646
chr4 120049576 120049586 TFEC JASPAR yes 49274647
chr4 120049611 120049617 NFIC JASPAR yes 49274648
chr4 120049628 120049643 FOXP1 JASPAR yes 49274649
chr4 120049634 120049649 LEF1 JASPAR yes 49274650
chr4 120049635 120049649 TCF7L2 JASPAR yes 49274651
chr4 120049640 120049655 HNF4A JASPAR yes 49274652
chr4 120049641 120049655 NR2F1 JASPAR yes 49274653
chr4 120049641 120049655 RXRB JASPAR yes 49274654
chr4 120049641 120049655 RXRG JASPAR yes 49274655
chr4 120049641 120049656 HNF4G JASPAR yes 49274656
chr4 120049641 120049656 NR2C2 JASPAR yes 49274657
chr4 120049645 120049651 TCF4 TRANSFAC yes 49274658
chr4 120049650 120049660 GABPA JASPAR yes 49274659
chr4 120049650 120049663 ELF1 JASPAR yes 49274660
chr4 120049652 120049658 ETS1 JASPAR yes 49274661
chr4 120049652 120049658 SPI1 JASPAR yes 49274662
chr4 120049652 120049662 ELK1 JASPAR yes 49274663
chr4 120049652 120049673 IRF1 JASPAR yes 49274664
chr4 120049654 120049669 STAT2 JASPAR yes 49274665
chr4 120049658 120049679 IRF1 JASPAR yes 49274666
chr4 120049668 120049689 IRF1 JASPAR yes 49274667
chr4 120049670 120049685 PRDM1 JASPAR yes 49274668
chr4 120049670 120049685 STAT2 JASPAR yes 49274669
chr4 120049671 120049685 STAT1 JASPAR yes 49274670
chr4 120049672 120049686 IRF7 JASPAR yes 49274671
chr4 120049672 120049686 IRF8 JASPAR yes 49274672
chr4 120049673 120049688 FOXP1 JASPAR yes 49274673
chr4 120049673 120049694 ZNF263 JASPAR yes 49274674
SNP sites on vista45732[chr4:120049398-120049695]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr4 120049592 rs80290384 C T no 7776451
chr4 120049658 rs1459062 G A
ELF1 ELK1 ETS1 GABPA IRF1 SPI1 STAT2
7776452
Genes possibly regulated by vista45732[chr4:120049398-120049695]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr4 120056939 120108944 + MYOZ2 ENSG00000172399.5 120056939 1.0 0.96 4968 92756
chr4 120113928 120133799 - RP11-455G16.1 ENSG00000178636.4 120133799 0.69 0.87 4969 15896
chr4 120133742 120216672 + USP53 ENSG00000145390.7 120133742 0.8 1.0 4970 15953
Expression level of Genes
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miRNAs possibly regulated by vista45732[chr4:120049398-120049695]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results