EnhancerDB
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  3. vista45800[chr4:124399993-124400470]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista45800[chr4:124399993-124400470]
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Tissue distribution of vista45800
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Transcription factor that possibly regulate vista45800[chr4:124399993-124400470]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr4 124399749 124400676 TCF7L2 UCSC Txn Factor no Conserved 108533371
chr4 124399874 124400528 FOXA1 UCSC Txn Factor no Conserved 108533372
chr4 124399890 124400430 GATA3 UCSC Txn Factor no Conserved 108533373
chr4 124399957 124400460 NFIC UCSC Txn Factor no Conserved 108533374
chr4 124399969 124400419 TEAD4 UCSC Txn Factor no Conserved 108533375
chr4 124399982 124400433 EP300 UCSC Txn Factor no Conserved 108533376
chr4 124399999 124400431 MYBL2 UCSC Txn Factor no Conserved 108533377
chr4 124400025 124400333 SP1 UCSC Txn Factor no Conserved 108533378
chr4 124400037 124400266 BHLHE40 UCSC Txn Factor no Conserved 108533379
chr4 124400053 124400371 JUND UCSC Txn Factor no Conserved 108533380
chr4 124400075 124400353 CEBPB UCSC Txn Factor no Conserved 108533381
chr4 124400086 124400277 HNF4G UCSC Txn Factor no Conserved 108533382
chr4 124399983 124399995 GRHL1 JASPAR yes 49277372
chr4 124399983 124399995 GRHL1 JASPAR yes 92543668
chr4 124400001 124400007 PEA3 TRANSFAC yes 49277373
chr4 124400001 124400007 PEA3 TRANSFAC yes 92543669
chr4 124400005 124400018 ELF1 JASPAR yes 49277374
chr4 124400005 124400018 ELF1 JASPAR yes 92543670
chr4 124400071 124400085 PLAG1 JASPAR yes 49277375
chr4 124400071 124400085 PLAG1 JASPAR yes 92543671
chr4 124400073 124400077 LFA1 TRANSFAC yes 49277376
chr4 124400073 124400077 LFA1 TRANSFAC yes 92543672
chr4 124400093 124400108 LEF1 JASPAR yes 49277377
chr4 124400093 124400108 LEF1 JASPAR yes 92543673
chr4 124400094 124400108 TCF7L2 JASPAR yes 49277378
chr4 124400094 124400108 TCF7L2 JASPAR yes 92543674
chr4 124400097 124400103 LEF1 TRANSFAC yes 49277379
chr4 124400097 124400103 TCF4 TRANSFAC yes 49277380
chr4 124400097 124400103 LEF1 TRANSFAC yes 92543675
chr4 124400097 124400103 TCF4 TRANSFAC yes 92543676
chr4 124400127 124400142 RUNX2 JASPAR yes 49277381
chr4 124400127 124400142 RUNX2 JASPAR yes 92543677
chr4 124400139 124400151 BHLHE23 JASPAR yes 49277382
chr4 124400139 124400151 BHLHE23 JASPAR yes 92543678
chr4 124400140 124400150 BHLHE22 JASPAR yes 49277383
chr4 124400140 124400150 NEUROD2 JASPAR yes 49277384
chr4 124400140 124400150 OLIG1 JASPAR yes 49277385
chr4 124400140 124400150 OLIG2 JASPAR yes 49277386
chr4 124400140 124400150 OLIG3 JASPAR yes 49277387
chr4 124400140 124400150 BHLHE22 JASPAR yes 92543679
chr4 124400140 124400150 NEUROD2 JASPAR yes 92543680
chr4 124400140 124400150 OLIG1 JASPAR yes 92543681
chr4 124400140 124400150 OLIG2 JASPAR yes 92543682
chr4 124400140 124400150 OLIG3 JASPAR yes 92543683
chr4 124400150 124400160 SP1 JASPAR yes 49277388
chr4 124400150 124400160 SP1 JASPAR yes 92543684
chr4 124400151 124400172 ZNF263 JASPAR yes 49277389
chr4 124400151 124400172 ZNF263 JASPAR yes 92543685
chr4 124400152 124400156 LFA1 TRANSFAC yes 49277390
chr4 124400152 124400156 LFA1 TRANSFAC yes 92543686
chr4 124400154 124400169 NR2C2 JASPAR yes 49277391
chr4 124400154 124400169 NR2C2 JASPAR yes 92543687
chr4 124400155 124400169 RXRB JASPAR yes 49277392
chr4 124400155 124400169 RXRG JASPAR yes 49277393
chr4 124400155 124400169 RXRB JASPAR yes 92543688
chr4 124400155 124400169 RXRG JASPAR yes 92543689
chr4 124400157 124400161 LFA1 TRANSFAC yes 49277394
chr4 124400157 124400161 LFA1 TRANSFAC yes 92543690
chr4 124400163 124400174 CDX2 JASPAR yes 49277395
chr4 124400163 124400174 CDX2 JASPAR yes 92543691
chr4 124400164 124400175 HOXA10 JASPAR yes 49277396
chr4 124400164 124400175 HOXA10 JASPAR yes 92543692
chr4 124400165 124400174 CDX1 JASPAR yes 49277397
chr4 124400165 124400174 CDX1 JASPAR yes 92543693
chr4 124400166 124400178 FOXI1 JASPAR yes 49277398
chr4 124400166 124400178 FOXI1 JASPAR yes 92543694
chr4 124400183 124400194 CEBPA JASPAR yes 49277399
chr4 124400183 124400194 CEBPA JASPAR yes 92543695
chr4 124400196 124400209 SMAD2 JASPAR yes 49277400
chr4 124400196 124400209 SMAD2 JASPAR yes 92543696
chr4 124400200 124400204 NFE TRANSFAC yes 49277401
chr4 124400200 124400204 NFE TRANSFAC yes 92543697
chr4 124400202 124400212 TFAP4 JASPAR yes 49277402
chr4 124400202 124400212 TFAP4 JASPAR yes 92543698
chr4 124400223 124400227 YY1 TRANSFAC yes 49277403
chr4 124400223 124400227 YY1 TRANSFAC yes 92543699
chr4 124400239 124400243 YY1 TRANSFAC yes 49277404
chr4 124400239 124400243 YY1 TRANSFAC yes 92543700
chr4 124400240 124400255 TFAP2A JASPAR yes 49277405
chr4 124400240 124400255 TFAP2A JASPAR yes 92543701
chr4 124400242 124400257 TFAP2A JASPAR yes 49277406
chr4 124400242 124400257 TFAP2C JASPAR yes 49277407
chr4 124400242 124400257 TFAP2A JASPAR yes 92543702
chr4 124400242 124400257 TFAP2C JASPAR yes 92543703
chr4 124400243 124400254 TFAP2A JASPAR yes 49277408
chr4 124400243 124400254 TFAP2B JASPAR yes 49277409
chr4 124400243 124400254 TFAP2C JASPAR yes 49277410
chr4 124400243 124400254 TFAP2A JASPAR yes 92543704
chr4 124400243 124400254 TFAP2B JASPAR yes 92543705
chr4 124400243 124400254 TFAP2C JASPAR yes 92543706
chr4 124400280 124400290 TEAD4 JASPAR yes 49277411
chr4 124400280 124400290 TEAD4 JASPAR yes 92543707
chr4 124400281 124400289 TEAD3 JASPAR yes 49277412
chr4 124400281 124400289 TEAD3 JASPAR yes 92543708
chr4 124400301 124400305 YY1 TRANSFAC yes 49277413
chr4 124400301 124400305 YY1 TRANSFAC yes 92543709
chr4 124400310 124400321 NFIL3 JASPAR yes 49277414
chr4 124400310 124400321 NFIL3 JASPAR yes 92543710
chr4 124400311 124400323 DBP JASPAR yes 49277415
chr4 124400311 124400323 HLF JASPAR yes 49277416
chr4 124400311 124400323 DBP JASPAR yes 92543711
chr4 124400311 124400323 HLF JASPAR yes 92543712
chr4 124400313 124400324 NFIL3 JASPAR yes 49277417
chr4 124400313 124400324 NFIL3 JASPAR yes 92543713
chr4 124400316 124400320 TEAD2 TRANSFAC yes 49277418
chr4 124400316 124400320 TEAD2 TRANSFAC yes 92543714
chr4 124400318 124400321 MYB TRANSFAC yes 49277419
chr4 124400318 124400321 MYB TRANSFAC yes 92543715
chr4 124400322 124400337 FOXP1 JASPAR yes 49277420
chr4 124400322 124400337 FOXP1 JASPAR yes 92543716
chr4 124400350 124400362 EHF JASPAR yes 49277421
chr4 124400350 124400362 ELF4 JASPAR yes 49277422
chr4 124400350 124400362 EHF JASPAR yes 92543717
chr4 124400350 124400362 ELF4 JASPAR yes 92543718
chr4 124400352 124400358 ETS1 JASPAR yes 49277423
chr4 124400352 124400358 SPI1 JASPAR yes 49277424
chr4 124400352 124400358 ETS1 JASPAR yes 92543719
chr4 124400352 124400358 SPI1 JASPAR yes 92543720
chr4 124400368 124400380 TEAD1 JASPAR yes 49277425
chr4 124400368 124400380 TEAD1 JASPAR yes 92543721
chr4 124400379 124400394 IRF9 JASPAR yes 49277426
chr4 124400379 124400394 IRF9 JASPAR yes 92543722
chr4 124400397 124400404 SPIB JASPAR yes 49277427
chr4 124400397 124400404 SPIB JASPAR yes 92543723
chr4 124400448 124400469 IRF1 JASPAR yes 49277428
chr4 124400448 124400469 IRF1 JASPAR yes 92543724
chr4 124400450 124400465 STAT2 JASPAR yes 49277429
chr4 124400450 124400465 STAT2 JASPAR yes 92543725
chr4 124400458 124400469 FOXA1 JASPAR yes 49277430
chr4 124400458 124400469 FOXA1 JASPAR yes 92543726
chr4 124400461 124400470 THAP1 JASPAR yes 49277431
chr4 124400461 124400470 THAP1 JASPAR yes 92543727
SNP sites on vista45800[chr4:124399993-124400470]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr4 124399996 rs737009 G A
EP300 FOXA1 GATA3 NFIC TCF7L2 TEAD4
7791401
chr4 124400009 rs74323813 C A,T
ELF1 EP300 FOXA1 GATA3 MYBL2 NFIC TCF7L2 TEAD4
7791402
chr4 124400063 rs144926176 G A
BHLHE40 EP300 FOXA1 GATA3 JUND MYBL2 NFIC SP1 TCF7L2 TEAD4
7791403
chr4 124400188 rs140945910 T C
BHLHE40 CEBPA CEBPB EP300 FOXA1 GATA3 HNF4G JUND MYBL2 NFIC SP1 TCF7L2 TEAD4
7791404
chr4 124400230 rs369128605 T C
BHLHE40 CEBPB EP300 FOXA1 GATA3 HNF4G JUND MYBL2 NFIC SP1 TCF7L2 TEAD4
7791405
chr4 124400249 rs115193239 G A,T
BHLHE40 CEBPB EP300 FOXA1 GATA3 HNF4G JUND MYBL2 NFIC SP1 TCF7L2 TEAD4 TFAP2A TFAP2B TFAP2C
7791406
chr4 124400334 rs185587218 T C
CEBPB EP300 FOXA1 FOXP1 GATA3 JUND MYBL2 NFIC TCF7L2 TEAD4
7791407
Genes possibly regulated by vista45800[chr4:124399993-124400470]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr4 124317950 124324910 + SPRY1 ENSG00000164056.6 124317950 0.8 0.99 4994 17957
Expression level of Genes
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miRNAs possibly regulated by vista45800[chr4:124399993-124400470]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results