EnhancerDB
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  3. vista46084[chr4:144401789-144402147]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista46084[chr4:144401789-144402147]
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Tissue distribution of vista46084
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Transcription factor that possibly regulate vista46084[chr4:144401789-144402147]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr4 144401825 144401830 ETS2 TRANSFAC yes 49289752
chr4 144401832 144401835 MYB TRANSFAC yes 49289753
chr4 144401832 144401843 RUNX1 JASPAR yes 49289754
chr4 144401833 144401854 IRF1 JASPAR yes 49289755
chr4 144401838 144401850 IRF1 JASPAR yes 49289756
chr4 144401841 144401856 HNF1A JASPAR yes 49289757
chr4 144401842 144401855 HNF1B JASPAR yes 49289758
chr4 144401855 144401866 DUX4 JASPAR yes 49289759
chr4 144401855 144401866 PHOX2A JASPAR yes 49289760
chr4 144401855 144401866 PROP1 JASPAR yes 49289761
chr4 144401859 144401867 RHOXF1 JASPAR yes 49289762
chr4 144401890 144401906 SOX8 JASPAR yes 49289763
chr4 144401909 144401924 RUNX2 JASPAR yes 49289764
chr4 144401910 144401913 MYB TRANSFAC yes 49289765
chr4 144401910 144401931 IRF1 JASPAR yes 49289766
chr4 144401912 144401927 IRF9 JASPAR yes 49289767
chr4 144401913 144401927 IRF7 JASPAR yes 49289768
chr4 144401915 144401927 IRF1 JASPAR yes 49289769
chr4 144401915 144401930 FOXP1 JASPAR yes 49289770
chr4 144401922 144401928 HiNF-A TRANSFAC yes 49289771
chr4 144401941 144401944 MYB TRANSFAC yes 49289772
chr4 144401942 144401956 JUN JASPAR yes 49289773
chr4 144401945 144401956 FOSL2 JASPAR yes 49289774
chr4 144401945 144401956 JUNB JASPAR yes 49289775
chr4 144401945 144401959 PAX6 JASPAR yes 49289776
chr4 144401946 144401957 FOS JASPAR yes 49289777
chr4 144401946 144401957 JUND JASPAR yes 49289778
chr4 144401946 144401957 NFE2 JASPAR yes 49289779
chr4 144401947 144401956 JDP2 JASPAR yes 49289780
chr4 144401947 144401961 JUN JASPAR yes 49289781
chr4 144401948 144401959 BATF JASPAR yes 49289782
chr4 144401951 144401958 TBP TRANSFAC yes 49289783
chr4 144401951 144401958 TFIID TRANSFAC yes 49289784
chr4 144401955 144401966 PHOX2A JASPAR yes 49289785
chr4 144401956 144401966 PAX3 JASPAR yes 49289786
chr4 144401960 144401975 MEF2A JASPAR yes 49289787
chr4 144401962 144401974 MEF2A JASPAR yes 49289788
chr4 144401962 144401974 MEF2B JASPAR yes 49289789
chr4 144401962 144401974 MEF2D JASPAR yes 49289790
chr4 144401963 144401973 MEF2A JASPAR yes 49289791
chr4 144401966 144401970 YY1 TRANSFAC yes 49289792
chr4 144402003 144402006 MYB TRANSFAC yes 49289793
chr4 144402009 144402023 SPI1 JASPAR yes 49289794
chr4 144402009 144402023 SPIC JASPAR yes 49289795
chr4 144402015 144402019 LFA1 TRANSFAC yes 49289796
chr4 144402027 144402042 FOXP1 JASPAR yes 49289797
chr4 144402028 144402039 FOXA1 JASPAR yes 49289798
chr4 144402028 144402043 FOXA1 JASPAR yes 49289799
chr4 144402029 144402040 FOXC1 JASPAR yes 49289800
chr4 144402029 144402041 FOXC2 JASPAR yes 49289801
chr4 144402029 144402044 IRF9 JASPAR yes 49289802
chr4 144402062 144402068 ZNF354C JASPAR yes 49289803
chr4 144402086 144402092 NFIC JASPAR yes 49289804
chr4 144402088 144402092 H1TF2 TRANSFAC yes 49289805
chr4 144402088 144402092 NFE TRANSFAC yes 49289806
chr4 144402088 144402092 SRF TRANSFAC yes 49289807
chr4 144402103 144402115 TEAD1 JASPAR yes 49289808
chr4 144402105 144402115 TEAD1 JASPAR yes 49289809
chr4 144402109 144402122 POU3F3 JASPAR yes 49289810
chr4 144402109 144402123 POU1F1 JASPAR yes 49289811
chr4 144402110 144402122 POU3F2 JASPAR yes 49289812
chr4 144402114 144402127 DUXA JASPAR yes 49289813
chr4 144402115 144402126 DUX4 JASPAR yes 49289814
SNP sites on vista46084[chr4:144401789-144402147]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr4 144401859 rs146759608 T G
DUX4 PHOX2A PROP1 RHOXF1
7858031
chr4 144401960 rs73850430 C G
JUN MEF2A PAX3 PHOX2A
7858032
chr4 144402052 rs115257486 T C no 7858033
chr4 144402136 rs149891309 C T no 7858034
chr4 144402138 rs79917593 A G no 7858035
Genes possibly regulated by vista46084[chr4:144401789-144402147]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr4 144434616 144478639 + SMARCA5 ENSG00000153147.5 144434616 0.77 0.99 5034 67531
Expression level of Genes
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miRNAs possibly regulated by vista46084[chr4:144401789-144402147]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results