EnhancerDB
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  3. vista46100[chr4:146408898-146409228]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista46100[chr4:146408898-146409228]
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Tissue distribution of vista46100
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Transcription factor that possibly regulate vista46100[chr4:146408898-146409228]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr4 146408760 146409330 POLR2A UCSC Txn Factor no Conserved 108533590
chr4 146408813 146409123 POU2F2 UCSC Txn Factor no Conserved 108533591
chr4 146408850 146409103 RUNX3 UCSC Txn Factor no Conserved 108533592
chr4 146408887 146408899 YY1 JASPAR yes 49290296
chr4 146408887 146408899 YY1 JASPAR yes 93398493
chr4 146408893 146408905 IRF1 JASPAR yes 49290297
chr4 146408893 146408905 IRF1 JASPAR yes 93398494
chr4 146408893 146408908 IRF9 JASPAR yes 49290298
chr4 146408893 146408908 IRF9 JASPAR yes 93398495
chr4 146408924 146408936 POU2F1 JASPAR yes 49290299
chr4 146408924 146408936 POU2F1 JASPAR yes 93398496
chr4 146408924 146408937 POU3F3 JASPAR yes 49290300
chr4 146408924 146408937 POU3F3 JASPAR yes 93398497
chr4 146408924 146408938 POU1F1 JASPAR yes 49290301
chr4 146408924 146408938 POU1F1 JASPAR yes 93398498
chr4 146408925 146408937 POU3F1 JASPAR yes 49290302
chr4 146408925 146408937 POU3F2 JASPAR yes 49290303
chr4 146408925 146408937 POU3F1 JASPAR yes 93398499
chr4 146408925 146408937 POU3F2 JASPAR yes 93398500
chr4 146408925 146408938 POU2F2 JASPAR yes 49290304
chr4 146408925 146408938 POU2F2 JASPAR yes 93398501
chr4 146408926 146408935 POU3F4 JASPAR yes 49290305
chr4 146408926 146408935 POU5F1B JASPAR yes 49290306
chr4 146408926 146408935 POU3F4 JASPAR yes 93398502
chr4 146408926 146408935 POU5F1B JASPAR yes 93398503
chr4 146408969 146408975 HiNF-A TRANSFAC yes 49290307
chr4 146408969 146408975 HiNF-A TRANSFAC yes 93398504
chr4 146408983 146408998 HSF1 JASPAR yes 49290308
chr4 146408983 146408998 HSF1 JASPAR yes 93398505
chr4 146408984 146408997 HSF1 JASPAR yes 49290309
chr4 146408984 146408997 HSF2 JASPAR yes 49290310
chr4 146408984 146408997 HSF4 JASPAR yes 49290311
chr4 146408984 146408997 HSF1 JASPAR yes 93398506
chr4 146408984 146408997 HSF2 JASPAR yes 93398507
chr4 146408984 146408997 HSF4 JASPAR yes 93398508
chr4 146408994 146409007 POU2F2 JASPAR yes 49290312
chr4 146408994 146409007 POU2F2 JASPAR yes 93398509
chr4 146408994 146409008 POU1F1 JASPAR yes 49290313
chr4 146408994 146409008 POU1F1 JASPAR yes 93398510
chr4 146408995 146409007 POU3F1 JASPAR yes 49290314
chr4 146408995 146409007 POU3F2 JASPAR yes 49290315
chr4 146408995 146409007 POU3F1 JASPAR yes 93398511
chr4 146408995 146409007 POU3F2 JASPAR yes 93398512
chr4 146408995 146409008 POU3F3 JASPAR yes 49290316
chr4 146408995 146409008 POU3F3 JASPAR yes 93398513
chr4 146408996 146409000 YY1 TRANSFAC yes 49290317
chr4 146408996 146409000 YY1 TRANSFAC yes 93398514
chr4 146408996 146409008 POU2F1 JASPAR yes 49290318
chr4 146408996 146409008 POU2F1 JASPAR yes 93398515
chr4 146408997 146409004 POU2F1 TRANSFAC yes 49290319
chr4 146408997 146409004 POU2F2C TRANSFAC yes 49290320
chr4 146408997 146409004 POU2F2 TRANSFAC yes 49290321
chr4 146408997 146409004 POU2F1 TRANSFAC yes 93398516
chr4 146408997 146409004 POU2F2C TRANSFAC yes 93398517
chr4 146408997 146409004 POU2F2 TRANSFAC yes 93398518
chr4 146408997 146409005 POU2F1 TRANSFAC yes 49290322
chr4 146408997 146409005 POU2F1 TRANSFAC yes 93398519
chr4 146408997 146409006 POU3F4 JASPAR yes 49290323
chr4 146408997 146409006 POU5F1B JASPAR yes 49290324
chr4 146408997 146409006 POU3F4 JASPAR yes 93398520
chr4 146408997 146409006 POU5F1B JASPAR yes 93398521
chr4 146409006 146409011 ETS2 TRANSFAC yes 49290325
chr4 146409006 146409011 ETS2 TRANSFAC yes 93398522
chr4 146409013 146409017 NFE TRANSFAC yes 49290326
chr4 146409013 146409017 NFE TRANSFAC yes 93398523
chr4 146409013 146409018 GATA1 TRANSFAC yes 49290327
chr4 146409013 146409018 GATA1 TRANSFAC yes 93398524
chr4 146409013 146409019 GATA3 JASPAR yes 49290328
chr4 146409013 146409019 GATA3 JASPAR yes 93398525
chr4 146409022 146409037 STAT2 JASPAR yes 49290329
chr4 146409022 146409037 STAT2 JASPAR yes 93398526
chr4 146409040 146409051 CEBPA JASPAR yes 49290330
chr4 146409040 146409051 CEBPA JASPAR yes 93398527
chr4 146409052 146409071 PAX5 JASPAR yes 49290331
chr4 146409052 146409071 PAX5 JASPAR yes 93398528
chr4 146409082 146409102 PPARG JASPAR yes 49290332
chr4 146409082 146409102 PPARG JASPAR yes 93398529
chr4 146409104 146409108 YY1 TRANSFAC yes 49290333
chr4 146409104 146409108 YY1 TRANSFAC yes 93398530
chr4 146409126 146409130 TEAD2 TRANSFAC yes 49290334
chr4 146409126 146409130 TEAD2 TRANSFAC yes 93398531
chr4 146409132 146409138 TCF4 TRANSFAC yes 49290335
chr4 146409132 146409138 TCF4 TRANSFAC yes 93398532
chr4 146409138 146409142 TEAD2 TRANSFAC yes 49290336
chr4 146409138 146409142 TEAD2 TRANSFAC yes 93398533
chr4 146409179 146409193 PAX6 JASPAR yes 49290337
chr4 146409179 146409193 PAX6 JASPAR yes 93398534
chr4 146409187 146409191 YY1 TRANSFAC yes 49290338
chr4 146409187 146409191 YY1 TRANSFAC yes 93398535
chr4 146409200 146409210 TBX21 JASPAR yes 49290339
chr4 146409200 146409210 TBX21 JASPAR yes 93398536
chr4 146409200 146409211 TBX20 JASPAR yes 49290340
chr4 146409200 146409211 TBX2 JASPAR yes 49290341
chr4 146409200 146409211 TBX20 JASPAR yes 93398537
chr4 146409200 146409211 TBX2 JASPAR yes 93398538
chr4 146409200 146409213 EOMES JASPAR yes 49290342
chr4 146409200 146409213 EOMES JASPAR yes 93398539
chr4 146409201 146409209 MGA JASPAR yes 49290343
chr4 146409201 146409209 TBX15 JASPAR yes 49290344
chr4 146409201 146409209 TBX1 JASPAR yes 49290345
chr4 146409201 146409209 TBX4 JASPAR yes 49290346
chr4 146409201 146409209 TBX5 JASPAR yes 49290347
chr4 146409201 146409209 MGA JASPAR yes 93398540
chr4 146409201 146409209 TBX15 JASPAR yes 93398541
chr4 146409201 146409209 TBX1 JASPAR yes 93398542
chr4 146409201 146409209 TBX4 JASPAR yes 93398543
chr4 146409201 146409209 TBX5 JASPAR yes 93398544
chr4 146409201 146409211 TBR1 JASPAR yes 49290348
chr4 146409201 146409211 TBR1 JASPAR yes 93398545
chr4 146409207 146409215 EHF JASPAR yes 49290349
chr4 146409207 146409215 EHF JASPAR yes 93398546
chr4 146409208 146409215 SPI1 JASPAR yes 49290350
chr4 146409208 146409215 SPI1 JASPAR yes 93398547
chr4 146409215 146409224 ZEB1 JASPAR yes 49290351
chr4 146409215 146409224 ZEB1 JASPAR yes 93398548
chr4 146409224 146409234 RELA JASPAR yes 49290352
chr4 146409224 146409234 RELA JASPAR yes 93398549
SNP sites on vista46100[chr4:146408898-146409228]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr4 146408926 rs530767613 A G
POLR2A POU1F1 POU2F1 POU2F2 POU3F1 POU3F2 POU3F3 POU3F4 POU5F1B RUNX3
7861853
chr4 146408938 rs77342071 G A
POLR2A POU1F1 POU2F2 RUNX3
7861854
chr4 146408957 rs148516769 C T
POLR2A POU2F2 RUNX3
7861855
chr4 146409033 rs112129955 AG A
POLR2A POU2F2 RUNX3 STAT2
7861856
chr4 146409110 rs569827839 G A
POLR2A POU2F2
7861857
Genes possibly regulated by vista46100[chr4:146408898-146409228]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr4 146402346 146479231 + SMAD1 ENSG00000170365.5 146402346 0.79 0.99 5043 93448
Expression level of Genes
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miRNAs possibly regulated by vista46100[chr4:146408898-146409228]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results