EnhancerDB
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  3. vista46121[chr4:147196519-147196807]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista46121[chr4:147196519-147196807]
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Tissue distribution of vista46121
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Transcription factor that possibly regulate vista46121[chr4:147196519-147196807]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr4 147196591 147196607 ZNF143 JASPAR yes 49291162
chr4 147196591 147196607 ZNF143 JASPAR yes 93446993
chr4 147196608 147196627 REST JASPAR yes 49291163
chr4 147196608 147196627 REST JASPAR yes 93446994
chr4 147196625 147196630 H4TF1 TRANSFAC yes 49291164
chr4 147196625 147196630 H4TF1 TRANSFAC yes 93446995
chr4 147196641 147196651 NFIA JASPAR yes 49291165
chr4 147196641 147196651 NFIA JASPAR yes 93446996
chr4 147196642 147196651 NFIX JASPAR yes 49291166
chr4 147196642 147196651 NFIX JASPAR yes 93446997
chr4 147196642 147196658 ZNF143 JASPAR yes 49291167
chr4 147196642 147196658 ZNF143 JASPAR yes 93446998
chr4 147196643 147196649 NFIC JASPAR yes 49291168
chr4 147196643 147196649 NFIC JASPAR yes 93446999
chr4 147196648 147196658 SREBF2 JASPAR yes 49291169
chr4 147196648 147196658 TFE3 JASPAR yes 49291170
chr4 147196648 147196658 TFEB JASPAR yes 49291171
chr4 147196648 147196658 TFEC JASPAR yes 49291172
chr4 147196648 147196658 SREBF2 JASPAR yes 93447000
chr4 147196648 147196658 TFE3 JASPAR yes 93447001
chr4 147196648 147196658 TFEB JASPAR yes 93447002
chr4 147196648 147196658 TFEC JASPAR yes 93447003
chr4 147196648 147196659 USF1 JASPAR yes 49291173
chr4 147196648 147196659 USF2 JASPAR yes 49291174
chr4 147196648 147196659 USF1 JASPAR yes 93447004
chr4 147196648 147196659 USF2 JASPAR yes 93447005
chr4 147196660 147196664 LFA1 TRANSFAC yes 49291175
chr4 147196660 147196664 LFA1 TRANSFAC yes 93447006
chr4 147196665 147196682 PAX1 JASPAR yes 49291176
chr4 147196665 147196682 PAX9 JASPAR yes 49291177
chr4 147196665 147196682 PAX1 JASPAR yes 93447007
chr4 147196665 147196682 PAX9 JASPAR yes 93447008
chr4 147196666 147196680 PAX6 JASPAR yes 49291178
chr4 147196666 147196680 PAX6 JASPAR yes 93447009
chr4 147196679 147196692 NFKB2 JASPAR yes 49291179
chr4 147196679 147196692 NFKB2 JASPAR yes 93447010
chr4 147196680 147196690 NFKB1 JASPAR yes 49291180
chr4 147196680 147196690 REL JASPAR yes 49291181
chr4 147196680 147196690 NFKB1 JASPAR yes 93447011
chr4 147196680 147196690 REL JASPAR yes 93447012
chr4 147196680 147196691 NFKB1 JASPAR yes 49291182
chr4 147196680 147196691 NFKB1 JASPAR yes 93447013
chr4 147196681 147196691 NFKB1 JASPAR yes 49291183
chr4 147196681 147196691 REL JASPAR yes 49291184
chr4 147196681 147196691 NFKB1 JASPAR yes 93447014
chr4 147196681 147196691 REL JASPAR yes 93447015
chr4 147196683 147196697 SPI1 JASPAR yes 49291185
chr4 147196683 147196697 SPI1 JASPAR yes 93447016
chr4 147196686 147196702 SRF JASPAR yes 49291186
chr4 147196686 147196702 SRF JASPAR yes 93447017
chr4 147196686 147196704 SRF JASPAR yes 49291187
chr4 147196686 147196704 SRF JASPAR yes 93447018
chr4 147196689 147196697 GATA3 JASPAR yes 49291188
chr4 147196689 147196697 GATA5 JASPAR yes 49291189
chr4 147196689 147196697 GATA3 JASPAR yes 93447019
chr4 147196689 147196697 GATA5 JASPAR yes 93447020
chr4 147196711 147196722 USF1 JASPAR yes 49291190
chr4 147196711 147196722 USF1 JASPAR yes 93447021
chr4 147196712 147196722 TFE3 JASPAR yes 49291191
chr4 147196712 147196722 TFEB JASPAR yes 49291192
chr4 147196712 147196722 TFEC JASPAR yes 49291193
chr4 147196712 147196722 TFE3 JASPAR yes 93447022
chr4 147196712 147196722 TFEB JASPAR yes 93447023
chr4 147196712 147196722 TFEC JASPAR yes 93447024
chr4 147196712 147196723 USF2 JASPAR yes 49291194
chr4 147196712 147196723 USF2 JASPAR yes 93447025
chr4 147196725 147196734 HIC2 JASPAR yes 49291195
chr4 147196725 147196734 HIC2 JASPAR yes 93447026
chr4 147196731 147196737 SOX10 JASPAR yes 49291196
chr4 147196731 147196737 SOX10 JASPAR yes 93447027
chr4 147196735 147196752 ZNF410 JASPAR yes 49291197
chr4 147196735 147196752 ZNF410 JASPAR yes 93447028
chr4 147196737 147196741 YY1 TRANSFAC yes 49291198
chr4 147196737 147196741 YY1 TRANSFAC yes 93447029
chr4 147196737 147196747 HOXA13 JASPAR yes 49291199
chr4 147196737 147196747 HOXB13 JASPAR yes 49291200
chr4 147196737 147196747 HOXD13 JASPAR yes 49291201
chr4 147196737 147196747 HOXA13 JASPAR yes 93447030
chr4 147196737 147196747 HOXB13 JASPAR yes 93447031
chr4 147196737 147196747 HOXD13 JASPAR yes 93447032
chr4 147196737 147196752 STAT1 JASPAR yes 49291202
chr4 147196737 147196752 STAT1 JASPAR yes 93447033
chr4 147196739 147196750 STAT1 JASPAR yes 49291203
chr4 147196739 147196750 STAT3 JASPAR yes 49291204
chr4 147196739 147196750 STAT1 JASPAR yes 93447034
chr4 147196739 147196750 STAT3 JASPAR yes 93447035
chr4 147196744 147196749 ETS2 TRANSFAC yes 49291205
chr4 147196744 147196749 ETS2 TRANSFAC yes 93447036
chr4 147196766 147196770 ESR1 TRANSFAC yes 49291206
chr4 147196766 147196770 ESR1 TRANSFAC yes 93447037
chr4 147196773 147196777 TEAD2 TRANSFAC yes 49291207
chr4 147196773 147196777 TEAD2 TRANSFAC yes 93447038
chr4 147196778 147196793 HSF1 JASPAR yes 49291208
chr4 147196778 147196793 HSF1 JASPAR yes 93447039
chr4 147196779 147196792 HSF2 JASPAR yes 49291209
chr4 147196779 147196792 HSF2 JASPAR yes 93447040
chr4 147196788 147196799 STAT3 JASPAR yes 49291210
chr4 147196788 147196799 STAT3 JASPAR yes 93447041
chr4 147196795 147196809 GATA2 JASPAR yes 49291211
chr4 147196795 147196809 GATA2 JASPAR yes 93447042
chr4 147196797 147196805 GATA3 JASPAR yes 49291212
chr4 147196797 147196805 GATA5 JASPAR yes 49291213
chr4 147196797 147196805 GATA3 JASPAR yes 93447043
chr4 147196797 147196805 GATA5 JASPAR yes 93447044
chr4 147196805 147196809 TEAD2 TRANSFAC yes 49291214
chr4 147196805 147196809 TEAD2 TRANSFAC yes 93447045
SNP sites on vista46121[chr4:147196519-147196807]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr4 147196726 rs565953710 G GT
HIC2
7865973
chr4 147196730 rs114561072 C T
HIC2
7865974
chr4 147196747 rs74732582 G A
ETS2 HOXA13 HOXB13 HOXD13 STAT1 STAT3 ZNF410
7865975
Genes possibly regulated by vista46121[chr4:147196519-147196807]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr4 147096837 147121152 + LSM6 ENSG00000164167.5 147096837 0.93 0.99 5047 318
chr4 147145709 147150208 + RP11-6L6.2 ENSG00000250673.1 147145709 0.88 1.0 5048 49190
Expression level of Genes
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miRNAs possibly regulated by vista46121[chr4:147196519-147196807]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results