EnhancerDB
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  3. vista46122[chr4:147250249-147250611]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista46122[chr4:147250249-147250611]
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Tissue distribution of vista46122
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Transcription factor that possibly regulate vista46122[chr4:147250249-147250611]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr4 147250356 147250525 FOS UCSC Txn Factor no Conserved 108533628
chr4 147250239 147250251 PKNOX2 JASPAR yes 49291215
chr4 147250239 147250251 PKNOX2 JASPAR yes 93448346
chr4 147250240 147250250 TFEB JASPAR yes 49291216
chr4 147250240 147250250 TFEC JASPAR yes 49291217
chr4 147250240 147250250 TFEB JASPAR yes 93448347
chr4 147250240 147250250 TFEC JASPAR yes 93448348
chr4 147250277 147250281 TEAD2 TRANSFAC yes 49291218
chr4 147250277 147250281 TEAD2 TRANSFAC yes 93448349
chr4 147250279 147250282 MYB TRANSFAC yes 49291219
chr4 147250279 147250282 MYB TRANSFAC yes 93448350
chr4 147250280 147250290 MYF6 JASPAR yes 49291220
chr4 147250280 147250290 NEUROG2 JASPAR yes 49291221
chr4 147250280 147250290 MYF6 JASPAR yes 93448351
chr4 147250280 147250290 NEUROG2 JASPAR yes 93448352
chr4 147250282 147250286 YY1 TRANSFAC yes 49291222
chr4 147250282 147250286 YY1 TRANSFAC yes 93448353
chr4 147250287 147250302 MEF2C JASPAR yes 49291223
chr4 147250287 147250302 MEF2C JASPAR yes 93448354
chr4 147250288 147250303 MEF2A JASPAR yes 49291224
chr4 147250288 147250303 MEF2A JASPAR yes 93448355
chr4 147250294 147250309 PRDM1 JASPAR yes 49291225
chr4 147250294 147250309 PRDM1 JASPAR yes 93448356
chr4 147250295 147250307 IRF1 JASPAR yes 49291226
chr4 147250295 147250307 IRF1 JASPAR yes 93448357
chr4 147250306 147250317 STAT1 JASPAR yes 49291227
chr4 147250306 147250317 STAT3 JASPAR yes 49291228
chr4 147250306 147250317 STAT1 JASPAR yes 93448358
chr4 147250306 147250317 STAT3 JASPAR yes 93448359
chr4 147250318 147250326 EHF JASPAR yes 49291229
chr4 147250318 147250326 EHF JASPAR yes 93448360
chr4 147250325 147250346 MAFG JASPAR yes 49291230
chr4 147250325 147250346 MAFG JASPAR yes 93448361
chr4 147250328 147250343 MEF2A JASPAR yes 49291231
chr4 147250328 147250343 MEF2A JASPAR yes 93448362
chr4 147250329 147250344 MEF2C JASPAR yes 49291232
chr4 147250329 147250344 MEF2C JASPAR yes 93448363
chr4 147250338 147250354 POU4F2 JASPAR yes 49291233
chr4 147250338 147250354 POU4F2 JASPAR yes 93448364
chr4 147250349 147250354 ETS2 TRANSFAC yes 49291234
chr4 147250349 147250354 ETS2 TRANSFAC yes 93448365
chr4 147250357 147250361 YY1 TRANSFAC yes 49291235
chr4 147250357 147250361 YY1 TRANSFAC yes 93448366
chr4 147250369 147250379 MSC JASPAR yes 49291236
chr4 147250369 147250379 MSC JASPAR yes 93448367
chr4 147250381 147250398 RXRA JASPAR yes 49291237
chr4 147250381 147250398 RXRA JASPAR yes 93448368
chr4 147250385 147250389 YY1 TRANSFAC yes 49291238
chr4 147250385 147250389 YY1 TRANSFAC yes 93448369
chr4 147250388 147250402 JUN JASPAR yes 49291239
chr4 147250388 147250402 JUN JASPAR yes 93448370
chr4 147250392 147250403 FOS JASPAR yes 49291240
chr4 147250392 147250403 JUND JASPAR yes 49291241
chr4 147250392 147250403 FOS JASPAR yes 93448371
chr4 147250392 147250403 JUND JASPAR yes 93448372
chr4 147250393 147250404 FOSL2 JASPAR yes 49291242
chr4 147250393 147250404 FOSL2 JASPAR yes 93448373
chr4 147250393 147250407 JUN JASPAR yes 49291243
chr4 147250393 147250407 JUN JASPAR yes 93448374
chr4 147250394 147250400 JUN TRANSFAC yes 49291244
chr4 147250394 147250400 JUN TRANSFAC yes 93448375
chr4 147250397 147250413 SOX8 JASPAR yes 49291245
chr4 147250397 147250413 SOX8 JASPAR yes 93448376
chr4 147250404 147250408 TEAD2 TRANSFAC yes 49291246
chr4 147250404 147250408 TEAD2 TRANSFAC yes 93448377
chr4 147250405 147250420 MAFK JASPAR yes 49291247
chr4 147250405 147250420 MAFK JASPAR yes 93448378
chr4 147250426 147250431 MYC TRANSFAC yes 49291248
chr4 147250426 147250431 MYC TRANSFAC yes 93448379
chr4 147250436 147250443 SPI1 JASPAR yes 49291249
chr4 147250436 147250443 SPI1 JASPAR yes 93448380
chr4 147250436 147250450 JUN JASPAR yes 49291250
chr4 147250436 147250450 JUN JASPAR yes 93448381
chr4 147250439 147250450 FOSL2 JASPAR yes 49291251
chr4 147250439 147250450 JUNB JASPAR yes 49291252
chr4 147250439 147250450 FOSL2 JASPAR yes 93448382
chr4 147250439 147250450 JUNB JASPAR yes 93448383
chr4 147250440 147250451 FOS JASPAR yes 49291253
chr4 147250440 147250451 FOSL1 JASPAR yes 49291254
chr4 147250440 147250451 JUND JASPAR yes 49291255
chr4 147250440 147250451 FOS JASPAR yes 93448384
chr4 147250440 147250451 FOSL1 JASPAR yes 93448385
chr4 147250440 147250451 JUND JASPAR yes 93448386
chr4 147250441 147250452 FOSL2 JASPAR yes 49291256
chr4 147250441 147250452 JUNB JASPAR yes 49291257
chr4 147250441 147250452 NFE2L2 JASPAR yes 49291258
chr4 147250441 147250452 FOSL2 JASPAR yes 93448387
chr4 147250441 147250452 JUNB JASPAR yes 93448388
chr4 147250441 147250452 NFE2L2 JASPAR yes 93448389
chr4 147250442 147250449 JUN TRANSFAC yes 49291259
chr4 147250442 147250449 JUN TRANSFAC yes 93448390
chr4 147250442 147250453 BATF JASPAR yes 49291260
chr4 147250442 147250453 BATF JASPAR yes 93448391
chr4 147250490 147250508 MAFF JASPAR yes 49291261
chr4 147250490 147250508 MAFF JASPAR yes 93448392
chr4 147250491 147250502 DUX4 JASPAR yes 49291262
chr4 147250491 147250502 DUX4 JASPAR yes 93448393
chr4 147250494 147250510 RFX4 JASPAR yes 49291263
chr4 147250494 147250510 RFX4 JASPAR yes 93448394
chr4 147250504 147250516 MEF2A JASPAR yes 49291264
chr4 147250504 147250516 MEF2D JASPAR yes 49291265
chr4 147250504 147250516 MEF2A JASPAR yes 93448395
chr4 147250504 147250516 MEF2D JASPAR yes 93448396
chr4 147250505 147250515 MEF2A JASPAR yes 49291266
chr4 147250505 147250515 MEF2A JASPAR yes 93448397
chr4 147250507 147250521 POU1F1 JASPAR yes 49291267
chr4 147250507 147250521 POU1F1 JASPAR yes 93448398
chr4 147250507 147250522 MEF2C JASPAR yes 49291268
chr4 147250507 147250522 MEF2C JASPAR yes 93448399
chr4 147250508 147250520 POU3F1 JASPAR yes 49291269
chr4 147250508 147250520 POU3F1 JASPAR yes 93448400
chr4 147250508 147250521 POU3F3 JASPAR yes 49291270
chr4 147250508 147250521 POU3F3 JASPAR yes 93448401
chr4 147250509 147250521 POU2F1 JASPAR yes 49291271
chr4 147250509 147250521 POU2F1 JASPAR yes 93448402
chr4 147250514 147250525 CDX2 JASPAR yes 49291272
chr4 147250514 147250525 CDX2 JASPAR yes 93448403
chr4 147250515 147250526 HOXA10 JASPAR yes 49291273
chr4 147250515 147250526 HOXA10 JASPAR yes 93448404
chr4 147250516 147250525 CDX1 JASPAR yes 49291274
chr4 147250516 147250525 CDX1 JASPAR yes 93448405
chr4 147250516 147250526 HOXA13 JASPAR yes 49291275
chr4 147250516 147250526 HOXB13 JASPAR yes 49291276
chr4 147250516 147250526 HOXD13 JASPAR yes 49291277
chr4 147250516 147250526 HOXA13 JASPAR yes 93448406
chr4 147250516 147250526 HOXB13 JASPAR yes 93448407
chr4 147250516 147250526 HOXD13 JASPAR yes 93448408
chr4 147250527 147250530 MYB TRANSFAC yes 49291278
chr4 147250527 147250530 MYB TRANSFAC yes 93448409
chr4 147250530 147250534 YY1 TRANSFAC yes 49291279
chr4 147250530 147250534 YY1 TRANSFAC yes 93448410
chr4 147250533 147250544 NFIL3 JASPAR yes 49291280
chr4 147250533 147250544 NFIL3 JASPAR yes 93448411
chr4 147250540 147250547 NKX3-1 JASPAR yes 49291281
chr4 147250540 147250547 NKX3-1 JASPAR yes 93448412
chr4 147250551 147250556 GATA2 JASPAR yes 49291282
chr4 147250551 147250556 GATA2 JASPAR yes 93448413
chr4 147250579 147250583 YY1 TRANSFAC yes 49291283
chr4 147250579 147250583 YY1 TRANSFAC yes 93448414
chr4 147250581 147250593 DBP JASPAR yes 49291284
chr4 147250581 147250593 HLF JASPAR yes 49291285
chr4 147250581 147250593 DBP JASPAR yes 93448415
chr4 147250581 147250593 HLF JASPAR yes 93448416
chr4 147250583 147250594 NFIL3 JASPAR yes 49291286
chr4 147250583 147250594 NFIL3 JASPAR yes 93448417
SNP sites on vista46122[chr4:147250249-147250611]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr4 147250294 rs564549566 A C
MEF2A MEF2C PRDM1
7866077
chr4 147250399 rs77774973 T C
FOS FOSL2 JUN JUND SOX8
7866078
chr4 147250515 rs578028693 AAAT A
CDX2 FOS HOXA10 MEF2A MEF2C MEF2D POU1F1 POU2F1 POU3F1 POU3F3
7866079
chr4 147250596 rs74908782 C T no 7866080
Genes possibly regulated by vista46122[chr4:147250249-147250611]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
Expression level of Genes
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No results
miRNAs possibly regulated by vista46122[chr4:147250249-147250611]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results