EnhancerDB
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  3. vista4617[chr1:203009674-203009974]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista4617[chr1:203009674-203009974]
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Tissue distribution of vista4617
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Transcription factor that possibly regulate vista4617[chr1:203009674-203009974]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr1 203009202 203009681 CTCF UCSC Txn Factor no Conserved 107858299
chr1 203009712 203009720 EHF JASPAR yes 34598928
chr1 203009712 203009720 EHF JASPAR yes 118434726
chr1 203009730 203009741 USF1 JASPAR yes 34598929
chr1 203009730 203009741 USF2 JASPAR yes 34598930
chr1 203009730 203009741 USF1 JASPAR yes 118434727
chr1 203009730 203009741 USF2 JASPAR yes 118434728
chr1 203009731 203009741 MAX JASPAR yes 34598931
chr1 203009731 203009741 MAX JASPAR yes 118434729
chr1 203009743 203009764 ZNF263 JASPAR yes 34598932
chr1 203009743 203009764 ZNF263 JASPAR yes 118434730
chr1 203009752 203009759 SPIB JASPAR yes 34598933
chr1 203009752 203009759 SPIB JASPAR yes 118434731
chr1 203009758 203009766 GATA3 JASPAR yes 34598934
chr1 203009758 203009766 GATA5 JASPAR yes 34598935
chr1 203009758 203009766 GATA3 JASPAR yes 118434732
chr1 203009758 203009766 GATA5 JASPAR yes 118434733
chr1 203009766 203009780 PLAG1 JASPAR yes 34598936
chr1 203009766 203009780 PLAG1 JASPAR yes 118434734
chr1 203009797 203009808 HOXA10 JASPAR yes 34598937
chr1 203009797 203009808 HOXA10 JASPAR yes 118434735
chr1 203009797 203009811 GATA2 JASPAR yes 34598938
chr1 203009797 203009811 GATA2 JASPAR yes 118434736
chr1 203009798 203009813 MEF2C JASPAR yes 34598939
chr1 203009798 203009813 MEF2C JASPAR yes 118434737
chr1 203009799 203009814 MEF2A JASPAR yes 34598940
chr1 203009799 203009814 MEF2A JASPAR yes 118434738
chr1 203009800 203009812 MEF2A JASPAR yes 34598941
chr1 203009800 203009812 MEF2B JASPAR yes 34598942
chr1 203009800 203009812 MEF2D JASPAR yes 34598943
chr1 203009800 203009812 MEF2A JASPAR yes 118434739
chr1 203009800 203009812 MEF2B JASPAR yes 118434740
chr1 203009800 203009812 MEF2D JASPAR yes 118434741
chr1 203009801 203009811 MEF2A JASPAR yes 34598944
chr1 203009801 203009811 MEF2A JASPAR yes 118434742
chr1 203009831 203009839 ISL2 JASPAR yes 34598945
chr1 203009831 203009839 ISL2 JASPAR yes 118434743
chr1 203009831 203009840 NKX3-2 JASPAR yes 34598946
chr1 203009831 203009840 NKX3-2 JASPAR yes 118434744
chr1 203009836 203009853 BCL6B JASPAR yes 34598947
chr1 203009836 203009853 BCL6B JASPAR yes 118434745
chr1 203009855 203009859 YY1 TRANSFAC yes 34598948
chr1 203009855 203009859 YY1 TRANSFAC yes 118434746
chr1 203009872 203009882 FIGLA JASPAR yes 34598949
chr1 203009872 203009882 ID4 JASPAR yes 34598950
chr1 203009872 203009882 TCF3 JASPAR yes 34598951
chr1 203009872 203009882 TCF4 JASPAR yes 34598952
chr1 203009872 203009882 FIGLA JASPAR yes 118434747
chr1 203009872 203009882 ID4 JASPAR yes 118434748
chr1 203009872 203009882 TCF3 JASPAR yes 118434749
chr1 203009872 203009882 TCF4 JASPAR yes 118434750
chr1 203009874 203009879 USF2 TRANSFAC yes 34598953
chr1 203009874 203009879 USF2 TRANSFAC yes 118434751
chr1 203009878 203009889 E2F6 JASPAR yes 34598954
chr1 203009878 203009889 E2F6 JASPAR yes 118434752
chr1 203009898 203009902 NFE TRANSFAC yes 34598955
chr1 203009898 203009902 NFE TRANSFAC yes 118434753
chr1 203009928 203009938 GSC JASPAR yes 34598956
chr1 203009928 203009938 GSC JASPAR yes 118434754
chr1 203009938 203009941 MYB TRANSFAC yes 34598957
chr1 203009938 203009941 MYB TRANSFAC yes 118434755
chr1 203009946 203009957 ESRRB JASPAR yes 34598958
chr1 203009946 203009957 ESRRB JASPAR yes 118434756
chr1 203009961 203009964 MYB TRANSFAC yes 34598959
chr1 203009961 203009964 MYB TRANSFAC yes 118434757
chr1 203009961 203009977 SOX4 JASPAR yes 34598960
chr1 203009961 203009977 SOX4 JASPAR yes 118434758
chr1 203009967 203009971 LFA1 TRANSFAC yes 34598961
chr1 203009967 203009971 LFA1 TRANSFAC yes 118434759
SNP sites on vista4617[chr1:203009674-203009974]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr1 203009761 rs78346632 A G
GATA3 GATA5 ZNF263
864703
chr1 203009909 rs61151040 G C no 864704
chr1 203009923 rs60749823 G T no 864705
Genes possibly regulated by vista4617[chr1:203009674-203009974]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr1 202909951 202927700 - ADIPOR1 ENSG00000159346.8 202927700 0.66 1.0 1728 18026
chr1 202930997 202936408 - CYB5R1 ENSG00000159348.8 202936408 0.82 0.99 1729 26734
chr1 202976514 202993976 + TMEM183A ENSG00000163444.7 202976514 0.66 0.99 1730 66840
chr1 202995626 203047868 + PPFIA4 ENSG00000143847.11 202995626 0.89 1.0 1731 85952
chr1 203052260 203055164 - MYOG ENSG00000122180.4 203055164 1.0 0.99 1732 54810
chr1 203059782 203136533 + ADORA1 ENSG00000163485.11 203059782 0.86 0.99 1733 50192
Expression level of Genes
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miRNAs possibly regulated by vista4617[chr1:203009674-203009974]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results