EnhancerDB
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  3. vista4636[chr1:203398304-203398692]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista4636[chr1:203398304-203398692]
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Tissue distribution of vista4636
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Transcription factor that possibly regulate vista4636[chr1:203398304-203398692]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr1 203397984 203398387 RELA UCSC Txn Factor no Conserved 107858944
chr1 203398309 203398315 ZNF354C JASPAR yes 118435839
chr1 203398355 203398364 NKX2-8 JASPAR yes 118435840
chr1 203398355 203398365 NKX2-3 JASPAR yes 118435841
chr1 203398411 203398425 TLX1 JASPAR yes 118435842
chr1 203398417 203398427 NFIA JASPAR yes 118435843
chr1 203398419 203398425 NFIC JASPAR yes 118435844
chr1 203398449 203398459 POU6F2 JASPAR yes 118435845
chr1 203398450 203398460 EMX1 JASPAR yes 118435846
chr1 203398450 203398460 EMX2 JASPAR yes 118435847
chr1 203398450 203398460 EVX1 JASPAR yes 118435848
chr1 203398450 203398460 EVX2 JASPAR yes 118435849
chr1 203398450 203398460 GBX1 JASPAR yes 118435850
chr1 203398450 203398460 GBX2 JASPAR yes 118435851
chr1 203398450 203398460 GSX2 JASPAR yes 118435852
chr1 203398450 203398460 HESX1 JASPAR yes 118435853
chr1 203398450 203398460 HOXA2 JASPAR yes 118435854
chr1 203398450 203398460 HOXB2 JASPAR yes 118435855
chr1 203398450 203398460 HOXB3 JASPAR yes 118435856
chr1 203398450 203398460 LHX2 JASPAR yes 118435857
chr1 203398450 203398460 LHX6 JASPAR yes 118435858
chr1 203398450 203398460 MEOX1 JASPAR yes 118435859
chr1 203398450 203398460 MEOX2 JASPAR yes 118435860
chr1 203398450 203398460 MIXL1 JASPAR yes 118435861
chr1 203398450 203398460 MNX1 JASPAR yes 118435862
chr1 203398450 203398460 NOTO JASPAR yes 118435863
chr1 203398450 203398460 RAX JASPAR yes 118435864
chr1 203398450 203398461 HOXA10 JASPAR yes 118435865
chr1 203398451 203398459 LMX1A JASPAR yes 118435866
chr1 203398451 203398459 LMX1B JASPAR yes 118435867
chr1 203398451 203398459 NKX6-1 JASPAR yes 118435868
chr1 203398451 203398459 NKX6-2 JASPAR yes 118435869
chr1 203398451 203398459 PDX1 JASPAR yes 118435870
chr1 203398451 203398459 VAX1 JASPAR yes 118435871
chr1 203398451 203398459 VAX2 JASPAR yes 118435872
chr1 203398451 203398459 VSX1 JASPAR yes 118435873
chr1 203398451 203398465 POU1F1 JASPAR yes 118435874
chr1 203398452 203398464 POU3F1 JASPAR yes 118435875
chr1 203398452 203398464 POU3F2 JASPAR yes 118435876
chr1 203398452 203398465 POU3F3 JASPAR yes 118435877
chr1 203398456 203398459 MYB TRANSFAC yes 118435878
chr1 203398459 203398463 YY1 TRANSFAC yes 118435879
chr1 203398460 203398471 CDX2 JASPAR yes 118435880
chr1 203398465 203398479 SPI1 JASPAR yes 118435881
chr1 203398474 203398485 STAT1 JASPAR yes 118435882
chr1 203398479 203398494 AR JASPAR yes 118435883
chr1 203398479 203398496 NR3C1 JASPAR yes 118435884
chr1 203398479 203398496 NR3C2 JASPAR yes 118435885
chr1 203398509 203398526 BCL6B JASPAR yes 118435886
chr1 203398510 203398522 ELF4 JASPAR yes 118435887
chr1 203398518 203398522 ESR1 TRANSFAC yes 118435888
chr1 203398526 203398529 MYB TRANSFAC yes 118435889
chr1 203398539 203398553 GATA2 JASPAR yes 118435890
chr1 203398541 203398549 GATA3 JASPAR yes 118435891
chr1 203398558 203398579 ZNF263 JASPAR yes 118435892
chr1 203398569 203398584 HNF4A JASPAR yes 118435893
chr1 203398570 203398585 NR2C2 JASPAR yes 118435894
chr1 203398581 203398596 TFAP2A JASPAR yes 118435895
chr1 203398581 203398596 TFAP2C JASPAR yes 118435896
chr1 203398584 203398595 TFAP2A JASPAR yes 118435897
chr1 203398584 203398595 TFAP2B JASPAR yes 118435898
chr1 203398584 203398595 TFAP2C JASPAR yes 118435899
chr1 203398584 203398596 TFAP2A JASPAR yes 118435900
chr1 203398584 203398596 TFAP2B JASPAR yes 118435901
chr1 203398584 203398596 TFAP2C JASPAR yes 118435902
chr1 203398599 203398611 NHLH1 JASPAR yes 118435903
chr1 203398599 203398612 ZBTB18 JASPAR yes 118435904
chr1 203398600 203398610 MSC JASPAR yes 118435905
chr1 203398600 203398610 MYF6 JASPAR yes 118435906
chr1 203398600 203398610 NHLH1 JASPAR yes 118435907
chr1 203398600 203398610 TFAP4 JASPAR yes 118435908
chr1 203398605 203398614 THAP1 JASPAR yes 118435909
chr1 203398611 203398622 BATF JASPAR yes 118435910
chr1 203398618 203398633 TFAP2A JASPAR yes 118435911
chr1 203398618 203398633 TFAP2C JASPAR yes 118435912
chr1 203398621 203398632 EBF1 JASPAR yes 118435913
chr1 203398621 203398633 TFAP2A JASPAR yes 118435914
chr1 203398621 203398633 TFAP2B JASPAR yes 118435915
chr1 203398621 203398633 TFAP2C JASPAR yes 118435916
chr1 203398623 203398632 TFAP2A JASPAR yes 118435917
chr1 203398632 203398647 HSF1 JASPAR yes 118435918
chr1 203398635 203398653 RARA JASPAR yes 118435919
chr1 203398636 203398654 ESR2 JASPAR yes 118435920
chr1 203398637 203398652 ESR2 JASPAR yes 118435921
chr1 203398642 203398655 NR2F1 JASPAR yes 118435922
chr1 203398644 203398655 ESRRA JASPAR yes 118435923
chr1 203398645 203398653 NR4A2 JASPAR yes 118435924
SNP sites on vista4636[chr1:203398304-203398692]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr1 203398326 rs149917915 C T
RELA
867953
chr1 203398343 rs189131183 A G
RELA
867954
chr1 203398411 rs145034507 C A,T
TLX1
867955
chr1 203398432 rs549919851 G T no 867956
chr1 203398442 rs143727616 C T no 867957
chr1 203398534 rs369978792 CTTGT C no 867958
chr1 203398630 rs10800934 G C
EBF1 TFAP2A TFAP2B TFAP2C
867959
chr1 203398670 rs533736067 CT C no 867960
chr1 203398679 rs187132477 T C no 867961
Genes possibly regulated by vista4636[chr1:203398304-203398692]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr1 203309756 203320617 - FMOD ENSG00000122176.10 203320617 0.85 0.99 1738 22313
chr1 203444956 203460480 + PRELP ENSG00000188783.5 203444956 0.8 0.78 1739 53736
chr1 203463271 203477992 + OPTC ENSG00000188770.5 203463271 0.94 1.0 1740 35421
Expression level of Genes
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miRNAs possibly regulated by vista4636[chr1:203398304-203398692]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results