EnhancerDB
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  3. vista4652[chr1:203622445-203622560]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista4652[chr1:203622445-203622560]
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Tissue distribution of vista4652
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Transcription factor that possibly regulate vista4652[chr1:203622445-203622560]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr1 203622442 203622452 HOXC10 JASPAR yes 34651399
chr1 203622442 203622452 HOXD11 JASPAR yes 34651400
chr1 203622442 203622452 HOXC10 JASPAR yes 118436698
chr1 203622442 203622452 HOXD11 JASPAR yes 118436699
chr1 203622442 203622453 HOXC11 JASPAR yes 34651401
chr1 203622442 203622453 HOXC12 JASPAR yes 34651402
chr1 203622442 203622453 HOXC13 JASPAR yes 34651403
chr1 203622442 203622453 HOXC11 JASPAR yes 118436700
chr1 203622442 203622453 HOXC12 JASPAR yes 118436701
chr1 203622442 203622453 HOXC13 JASPAR yes 118436702
chr1 203622445 203622448 MYB TRANSFAC yes 34651404
chr1 203622445 203622448 MYB TRANSFAC yes 118436703
chr1 203622457 203622461 NFE TRANSFAC yes 34651405
chr1 203622457 203622461 NFE TRANSFAC yes 118436704
chr1 203622483 203622501 MAFF JASPAR yes 34651406
chr1 203622483 203622501 MAFF JASPAR yes 118436705
chr1 203622484 203622499 TP53 JASPAR yes 34651407
chr1 203622484 203622499 TP53 JASPAR yes 118436706
chr1 203622485 203622496 NRL JASPAR yes 34651408
chr1 203622485 203622496 NRL JASPAR yes 118436707
chr1 203622485 203622500 MAFK JASPAR yes 34651409
chr1 203622485 203622500 MAFK JASPAR yes 118436708
chr1 203622490 203622509 RFX2 JASPAR yes 34651410
chr1 203622490 203622509 RFX2 JASPAR yes 118436709
chr1 203622499 203622514 RUNX2 JASPAR yes 34651411
chr1 203622499 203622514 RUNX2 JASPAR yes 118436710
chr1 203622500 203622509 RUNX2 JASPAR yes 34651412
chr1 203622500 203622509 RUNX2 JASPAR yes 118436711
chr1 203622500 203622510 RUNX3 JASPAR yes 34651413
chr1 203622500 203622510 RUNX3 JASPAR yes 118436712
chr1 203622518 203622524 ETS1 JASPAR yes 34651414
chr1 203622518 203622524 SPI1 JASPAR yes 34651415
chr1 203622518 203622524 ETS1 JASPAR yes 118436713
chr1 203622518 203622524 SPI1 JASPAR yes 118436714
chr1 203622534 203622544 ESX1 JASPAR yes 34651416
chr1 203622534 203622544 GBX1 JASPAR yes 34651417
chr1 203622534 203622544 GBX2 JASPAR yes 34651418
chr1 203622534 203622544 HESX1 JASPAR yes 34651419
chr1 203622534 203622544 LBX2 JASPAR yes 34651420
chr1 203622534 203622544 LHX2 JASPAR yes 34651421
chr1 203622534 203622544 RAX JASPAR yes 34651422
chr1 203622534 203622544 ESX1 JASPAR yes 118436715
chr1 203622534 203622544 GBX1 JASPAR yes 118436716
chr1 203622534 203622544 GBX2 JASPAR yes 118436717
chr1 203622534 203622544 HESX1 JASPAR yes 118436718
chr1 203622534 203622544 LBX2 JASPAR yes 118436719
chr1 203622534 203622544 LHX2 JASPAR yes 118436720
chr1 203622534 203622544 RAX JASPAR yes 118436721
chr1 203622535 203622543 DLX6 JASPAR yes 34651423
chr1 203622535 203622543 MSX2 JASPAR yes 34651424
chr1 203622535 203622543 DLX6 JASPAR yes 118436722
chr1 203622535 203622543 MSX2 JASPAR yes 118436723
chr1 203622545 203622560 RFX5 JASPAR yes 34651425
chr1 203622545 203622560 RFX5 JASPAR yes 118436724
chr1 203622553 203622562 POU3F4 JASPAR yes 34651426
chr1 203622553 203622562 POU5F1B JASPAR yes 34651427
chr1 203622553 203622562 POU3F4 JASPAR yes 118436725
chr1 203622553 203622562 POU5F1B JASPAR yes 118436726
chr1 203622556 203622564 FOXO3 JASPAR yes 34651428
chr1 203622556 203622564 FOXO3 JASPAR yes 118436727
SNP sites on vista4652[chr1:203622445-203622560]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr1 203622465 rs72743688 C T no 870452
chr1 203622519 rs115369774 C T
ETS1 SPI1
870453
chr1 203622548 rs114201411 A G
RFX5
870454
Genes possibly regulated by vista4652[chr1:203622445-203622560]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr1 203595689 203713209 + ATP2B4 ENSG00000058668.10 203595689 0.84 1.0 1741 73244
Expression level of Genes
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miRNAs possibly regulated by vista4652[chr1:203622445-203622560]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results