EnhancerDB
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  3. vista466[chr1:15539906-15540096]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista466[chr1:15539906-15540096]
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Tissue distribution of vista466
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Transcription factor that possibly regulate vista466[chr1:15539906-15540096]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr1 15539904 15539914 NFATC3 JASPAR yes 26971829
chr1 15539904 15539914 NFATC3 JASPAR yes 118235727
chr1 15539906 15539913 NFATC2 JASPAR yes 26971830
chr1 15539906 15539913 NFATC2 JASPAR yes 118235728
chr1 15539921 15539926 MYB TRANSFAC yes 26971831
chr1 15539921 15539926 MYB TRANSFAC yes 118235729
chr1 15539922 15539933 FOXP2 JASPAR yes 26971832
chr1 15539922 15539933 FOXP2 JASPAR yes 118235730
chr1 15539923 15539931 FOXO3 JASPAR yes 26971833
chr1 15539923 15539931 FOXO3 JASPAR yes 118235731
chr1 15539925 15539937 GRHL1 JASPAR yes 26971834
chr1 15539925 15539937 GRHL1 JASPAR yes 118235732
chr1 15539928 15539947 REST JASPAR yes 26971835
chr1 15539928 15539947 REST JASPAR yes 118235733
chr1 15539931 15539935 H4TF2 TRANSFAC yes 26971836
chr1 15539931 15539935 H4TF2 TRANSFAC yes 118235734
chr1 15539943 15539951 FOXO3 JASPAR yes 26971837
chr1 15539943 15539951 FOXO3 JASPAR yes 118235735
chr1 15539945 15539957 TAL1 JASPAR yes 26971838
chr1 15539945 15539957 TAL1 JASPAR yes 118235736
chr1 15539951 15539962 HOXC13 JASPAR yes 26971839
chr1 15539951 15539962 HOXC13 JASPAR yes 118235737
chr1 15539981 15539989 MEIS3 JASPAR yes 26971840
chr1 15539981 15539989 MEIS3 JASPAR yes 118235738
chr1 15539982 15539986 NFE TRANSFAC yes 26971841
chr1 15539982 15539986 NFE TRANSFAC yes 118235739
chr1 15539989 15540003 POU4F1 JASPAR yes 26971842
chr1 15539989 15540003 POU4F1 JASPAR yes 118235740
chr1 15539989 15540005 POU4F3 JASPAR yes 26971843
chr1 15539989 15540005 POU4F3 JASPAR yes 118235741
chr1 15539997 15540009 INSM1 JASPAR yes 26971844
chr1 15539997 15540009 INSM1 JASPAR yes 118235742
chr1 15539998 15540008 MZF1 JASPAR yes 26971845
chr1 15539998 15540008 MZF1 JASPAR yes 118235743
chr1 15540009 15540026 RARA JASPAR yes 26971846
chr1 15540009 15540026 RARA JASPAR yes 118235744
chr1 15540021 15540025 LFA1 TRANSFAC yes 26971847
chr1 15540021 15540025 LFA1 TRANSFAC yes 118235745
chr1 15540033 15540043 SP1 JASPAR yes 26971848
chr1 15540033 15540043 SP1 JASPAR yes 118235746
chr1 15540054 15540067 HSF1 JASPAR yes 26971849
chr1 15540054 15540067 HSF1 JASPAR yes 118235747
SNP sites on vista466[chr1:15539906-15540096]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr1 15539953 rs1316277 C T
HOXC13 TAL1
103312
chr1 15539971 rs117049333 T C no 103313
chr1 15539998 rs1316276 T C
INSM1 MZF1 POU4F1 POU4F3
103314
chr1 15540027 rs142487498 T C no 103315
Genes possibly regulated by vista466[chr1:15539906-15540096]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr1 15479028 15546976 + TMEM51 ENSG00000171729.9 15479028 0.79 1.0 202 39122
chr1 15490840 15497813 - C1orf195 ENSG00000204464.3 15497813 0.87 1.0 203 57907
chr1 15573768 15726779 + FHAD1 ENSG00000142621.15 15573768 0.93 1.0 204 66328
Expression level of Genes
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miRNAs possibly regulated by vista466[chr1:15539906-15540096]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results