EnhancerDB
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  3. vista4668[chr1:204049581-204049822]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista4668[chr1:204049581-204049822]
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Tissue distribution of vista4668
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Transcription factor that possibly regulate vista4668[chr1:204049581-204049822]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr1 204049563 204049582 PAX5 JASPAR yes 34676998
chr1 204049563 204049582 PAX5 JASPAR yes 118437367
chr1 204049585 204049595 GSC JASPAR yes 34676999
chr1 204049585 204049595 GSC JASPAR yes 118437368
chr1 204049598 204049604 NFIC JASPAR yes 34677000
chr1 204049598 204049604 NFIC JASPAR yes 118437369
chr1 204049611 204049625 EBF1 JASPAR yes 34677001
chr1 204049611 204049625 EBF1 JASPAR yes 118437370
chr1 204049612 204049626 GLIS3 JASPAR yes 34677002
chr1 204049612 204049626 GLIS3 JASPAR yes 118437371
chr1 204049612 204049627 TFAP2C JASPAR yes 34677003
chr1 204049612 204049627 TFAP2C JASPAR yes 118437372
chr1 204049613 204049624 EBF1 JASPAR yes 34677004
chr1 204049613 204049624 EBF1 JASPAR yes 118437373
chr1 204049625 204049630 SP1 TRANSFAC yes 34677005
chr1 204049625 204049630 SP1 TRANSFAC yes 118437374
chr1 204049625 204049631 SP1 TRANSFAC yes 34677006
chr1 204049625 204049631 SP1 TRANSFAC yes 118437375
chr1 204049652 204049673 ZNF263 JASPAR yes 34677007
chr1 204049652 204049673 ZNF263 JASPAR yes 118437376
chr1 204049654 204049671 RARA JASPAR yes 34677008
chr1 204049654 204049671 RARA JASPAR yes 118437377
chr1 204049655 204049676 ZNF263 JASPAR yes 34677009
chr1 204049655 204049676 ZNF263 JASPAR yes 118437378
chr1 204049668 204049689 ZNF263 JASPAR yes 34677010
chr1 204049668 204049689 ZNF263 JASPAR yes 118437379
chr1 204049673 204049683 SP1 JASPAR yes 34677011
chr1 204049673 204049683 SP1 JASPAR yes 118437380
chr1 204049678 204049688 SP1 JASPAR yes 34677012
chr1 204049678 204049688 SP1 JASPAR yes 118437381
chr1 204049679 204049685 SP1 TRANSFAC yes 34677013
chr1 204049679 204049685 SP1 TRANSFAC yes 118437382
chr1 204049679 204049689 SP1 JASPAR yes 34677014
chr1 204049679 204049689 SP1 JASPAR yes 118437383
chr1 204049679 204049698 CTCF JASPAR yes 34677015
chr1 204049679 204049698 CTCF JASPAR yes 118437384
chr1 204049680 204049687 SP1 TRANSFAC yes 34677016
chr1 204049680 204049687 SP1 TRANSFAC yes 118437385
chr1 204049681 204049686 SP1 TRANSFAC yes 34677017
chr1 204049681 204049686 SP1 TRANSFAC yes 118437386
chr1 204049681 204049687 SP1 TRANSFAC yes 34677018
chr1 204049681 204049687 SP1 TRANSFAC yes 118437387
chr1 204049681 204049688 SP1 TRANSFAC yes 34677019
chr1 204049681 204049688 SP1 TRANSFAC yes 118437388
chr1 204049693 204049704 BATF JASPAR yes 34677020
chr1 204049693 204049704 BATF JASPAR yes 118437389
chr1 204049702 204049712 TEAD1 JASPAR yes 34677021
chr1 204049702 204049712 TEAD4 JASPAR yes 34677022
chr1 204049702 204049712 TEAD1 JASPAR yes 118437390
chr1 204049702 204049712 TEAD4 JASPAR yes 118437391
chr1 204049703 204049711 TEAD3 JASPAR yes 34677023
chr1 204049703 204049711 TEF-1 TRANSFAC yes 34677024
chr1 204049703 204049711 TEAD3 JASPAR yes 118437392
chr1 204049703 204049711 TEF-1 TRANSFAC yes 118437393
chr1 204049728 204049738 SREBF1 JASPAR yes 34677025
chr1 204049728 204049738 SREBF2 JASPAR yes 34677026
chr1 204049728 204049738 SREBF1 JASPAR yes 118437394
chr1 204049728 204049738 SREBF2 JASPAR yes 118437395
chr1 204049744 204049760 ZNF143 JASPAR yes 34677027
chr1 204049744 204049760 ZNF143 JASPAR yes 118437396
chr1 204049759 204049763 H4TF2 TRANSFAC yes 34677028
chr1 204049759 204049763 H4TF2 TRANSFAC yes 118437397
chr1 204049762 204049769 SP1 TRANSFAC yes 34677029
chr1 204049762 204049769 SP1 TRANSFAC yes 118437398
chr1 204049763 204049768 SP1 TRANSFAC yes 34677030
chr1 204049763 204049768 SP1 TRANSFAC yes 118437399
chr1 204049763 204049769 SP1 TRANSFAC yes 34677031
chr1 204049763 204049769 SP1 TRANSFAC yes 118437400
chr1 204049766 204049772 SP1 TRANSFAC yes 34677032
chr1 204049766 204049772 SP1 TRANSFAC yes 118437401
chr1 204049766 204049776 SP1 JASPAR yes 34677033
chr1 204049766 204049776 SP1 JASPAR yes 118437402
chr1 204049771 204049781 SP1 JASPAR yes 34677034
chr1 204049771 204049781 SP1 JASPAR yes 118437403
chr1 204049782 204049788 SOX10 JASPAR yes 34677035
chr1 204049782 204049788 SOX10 JASPAR yes 118437404
chr1 204049802 204049812 SP1 JASPAR yes 34677036
chr1 204049802 204049812 SP1 JASPAR yes 118437405
chr1 204049820 204049829 ZEB1 JASPAR yes 34677037
chr1 204049820 204049829 ZEB1 JASPAR yes 118437406
SNP sites on vista4668[chr1:204049581-204049822]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr1 204049643 rs538026498 C T no 873365
chr1 204049717 rs76009630 C T no 873366
Genes possibly regulated by vista4668[chr1:204049581-204049822]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr1 204042243 204096863 + SOX13 ENSG00000143842.10 204042243 0.8 1.0 1746 92662
chr1 204100190 204121307 - ETNK2 ENSG00000143845.10 204121307 0.91 1.0 1747 28515
chr1 204123944 204135465 - REN ENSG00000143839.12 204135465 0.99 1.0 1748 14357
Expression level of Genes
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miRNAs possibly regulated by vista4668[chr1:204049581-204049822]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results