EnhancerDB
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  3. vista4673[chr1:204098794-204099127]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista4673[chr1:204098794-204099127]
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Tissue distribution of vista4673
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Transcription factor that possibly regulate vista4673[chr1:204098794-204099127]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr1 204098795 204098803 LBX1 JASPAR yes 34682217
chr1 204098795 204098803 LBX1 JASPAR yes 118437615
chr1 204098796 204098799 MYB TRANSFAC yes 34682218
chr1 204098796 204098799 MYB TRANSFAC yes 118437616
chr1 204098807 204098813 TCF4 TRANSFAC yes 34682219
chr1 204098807 204098813 TCF4 TRANSFAC yes 118437617
chr1 204098827 204098832 SP1 TRANSFAC yes 34682220
chr1 204098827 204098832 SP1 TRANSFAC yes 118437618
chr1 204098827 204098841 PLAG1 JASPAR yes 34682221
chr1 204098827 204098841 PLAG1 JASPAR yes 118437619
chr1 204098828 204098843 TFAP2A JASPAR yes 34682222
chr1 204098828 204098843 TFAP2A JASPAR yes 118437620
chr1 204098829 204098841 TFAP2A JASPAR yes 34682223
chr1 204098829 204098841 TFAP2A JASPAR yes 118437621
chr1 204098829 204098842 TFAP2A JASPAR yes 34682224
chr1 204098829 204098842 TFAP2B JASPAR yes 34682225
chr1 204098829 204098842 TFAP2C JASPAR yes 34682226
chr1 204098829 204098842 TFAP2A JASPAR yes 118437622
chr1 204098829 204098842 TFAP2B JASPAR yes 118437623
chr1 204098829 204098842 TFAP2C JASPAR yes 118437624
chr1 204098830 204098839 TFAP2A JASPAR yes 34682227
chr1 204098830 204098839 TFAP2A JASPAR yes 118437625
chr1 204098834 204098844 ZNF740 JASPAR yes 34682228
chr1 204098834 204098844 ZNF740 JASPAR yes 118437626
chr1 204098859 204098870 NFKB1 JASPAR yes 34682229
chr1 204098859 204098870 NFKB1 JASPAR yes 118437627
chr1 204098865 204098884 REST JASPAR yes 34682230
chr1 204098865 204098884 REST JASPAR yes 118437628
chr1 204098917 204098932 PRDM1 JASPAR yes 34682231
chr1 204098917 204098932 PRDM1 JASPAR yes 118437629
chr1 204098995 204099010 TFAP2C JASPAR yes 34682232
chr1 204098995 204099010 TFAP2C JASPAR yes 118437630
chr1 204098996 204099007 EBF1 JASPAR yes 34682233
chr1 204098996 204099007 EBF1 JASPAR yes 118437631
chr1 204099001 204099022 ZNF263 JASPAR yes 34682234
chr1 204099001 204099022 ZNF263 JASPAR yes 118437632
chr1 204099010 204099020 SP1 JASPAR yes 34682235
chr1 204099010 204099020 SP1 JASPAR yes 118437633
chr1 204099011 204099016 ETS2 TRANSFAC yes 34682236
chr1 204099011 204099016 ETS2 TRANSFAC yes 118437634
chr1 204099033 204099038 SP1 TRANSFAC yes 34682237
chr1 204099033 204099038 SP1 TRANSFAC yes 118437635
chr1 204099041 204099051 SREBF2 JASPAR yes 34682238
chr1 204099041 204099051 SREBF2 JASPAR yes 118437636
chr1 204099063 204099068 ETS2 TRANSFAC yes 34682239
chr1 204099063 204099068 ETS2 TRANSFAC yes 118437637
chr1 204099071 204099084 ZBTB18 JASPAR yes 34682240
chr1 204099071 204099084 ZBTB18 JASPAR yes 118437638
chr1 204099073 204099085 TAL1 JASPAR yes 34682241
chr1 204099073 204099085 TAL1 JASPAR yes 118437639
chr1 204099083 204099087 ESR1 TRANSFAC yes 34682242
chr1 204099083 204099087 ESR1 TRANSFAC yes 118437640
chr1 204099097 204099101 LFA1 TRANSFAC yes 34682243
chr1 204099097 204099101 LFA1 TRANSFAC yes 118437641
chr1 204099111 204099126 ZIC3 JASPAR yes 34682244
chr1 204099111 204099126 ZIC3 JASPAR yes 118437642
chr1 204099114 204099124 SP1 JASPAR yes 34682245
chr1 204099114 204099124 ZNF740 JASPAR yes 34682246
chr1 204099114 204099124 SP1 JASPAR yes 118437643
chr1 204099114 204099124 ZNF740 JASPAR yes 118437644
chr1 204099115 204099125 SP1 JASPAR yes 34682247
chr1 204099115 204099125 ZNF740 JASPAR yes 34682248
chr1 204099115 204099125 SP1 JASPAR yes 118437645
chr1 204099115 204099125 ZNF740 JASPAR yes 118437646
chr1 204099116 204099126 SP1 JASPAR yes 34682249
chr1 204099116 204099126 ZNF740 JASPAR yes 34682250
chr1 204099116 204099126 SP1 JASPAR yes 118437647
chr1 204099116 204099126 ZNF740 JASPAR yes 118437648
chr1 204099117 204099127 SP1 JASPAR yes 34682251
chr1 204099117 204099127 ZNF740 JASPAR yes 34682252
chr1 204099117 204099127 SP1 JASPAR yes 118437649
chr1 204099117 204099127 ZNF740 JASPAR yes 118437650
chr1 204099118 204099128 SP1 JASPAR yes 34682253
chr1 204099118 204099128 ZNF740 JASPAR yes 34682254
chr1 204099118 204099128 SP1 JASPAR yes 118437651
chr1 204099118 204099128 ZNF740 JASPAR yes 118437652
chr1 204099119 204099129 SP1 JASPAR yes 34682255
chr1 204099119 204099129 ZNF740 JASPAR yes 34682256
chr1 204099119 204099129 SP1 JASPAR yes 118437653
chr1 204099119 204099129 ZNF740 JASPAR yes 118437654
chr1 204099120 204099130 SP1 JASPAR yes 34682257
chr1 204099120 204099130 ZNF740 JASPAR yes 34682258
chr1 204099120 204099130 SP1 JASPAR yes 118437655
chr1 204099120 204099130 ZNF740 JASPAR yes 118437656
chr1 204099121 204099131 SP1 JASPAR yes 34682259
chr1 204099121 204099131 ZNF740 JASPAR yes 34682260
chr1 204099121 204099131 SP1 JASPAR yes 118437657
chr1 204099121 204099131 ZNF740 JASPAR yes 118437658
chr1 204099122 204099132 ZNF740 JASPAR yes 34682261
chr1 204099122 204099132 ZNF740 JASPAR yes 118437659
SNP sites on vista4673[chr1:204098794-204099127]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr1 204098815 rs554864987 A G no 873887
chr1 204098875 rs6672674 C T
REST
873888
chr1 204098948 rs563454660 C T no 873889
chr1 204099045 rs559139909 G A
SREBF2
873890
chr1 204099108 rs192848311 C A no 873891
chr1 204099120 rs547845202 G A,C,T
SP1 ZIC3 ZNF740
873892
chr1 204099123 rs562429840 G C
SP1 ZIC3 ZNF740
873893
Genes possibly regulated by vista4673[chr1:204098794-204099127]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr1 204042243 204096863 + SOX13 ENSG00000143842.10 204042243 0.8 1.0 1746 43449
chr1 204100190 204121307 - ETNK2 ENSG00000143845.10 204121307 0.91 1.0 1747 77820
chr1 204123944 204135465 - REN ENSG00000143839.12 204135465 0.99 1.0 1748 63662
chr1 204159469 204165614 - KISS1 ENSG00000170498.7 204165614 1.0 0.99 1749 33513
chr1 204167288 204183220 - GOLT1A ENSG00000174567.7 204183220 0.98 1.0 1750 15907
Expression level of Genes
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miRNAs possibly regulated by vista4673[chr1:204098794-204099127]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results