EnhancerDB
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  3. vista47009[chr5:9456049-9456295]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista47009[chr5:9456049-9456295]
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Tissue distribution of vista47009
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Transcription factor that possibly regulate vista47009[chr5:9456049-9456295]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr5 9456038 9456052 JUN JASPAR yes 60824843
chr5 9456038 9456052 JUN JASPAR yes 70617558
chr5 9456039 9456052 SMAD2 JASPAR yes 60824844
chr5 9456039 9456052 SMAD2 JASPAR yes 70617559
chr5 9456041 9456052 FOSL2 JASPAR yes 60824845
chr5 9456041 9456052 JUNB JASPAR yes 60824846
chr5 9456041 9456052 FOSL2 JASPAR yes 70617560
chr5 9456041 9456052 JUNB JASPAR yes 70617561
chr5 9456042 9456053 FOS JASPAR yes 60824847
chr5 9456042 9456053 FOSL1 JASPAR yes 60824848
chr5 9456042 9456053 JUND JASPAR yes 60824849
chr5 9456042 9456053 FOS JASPAR yes 70617562
chr5 9456042 9456053 FOSL1 JASPAR yes 70617563
chr5 9456042 9456053 JUND JASPAR yes 70617564
chr5 9456043 9456054 FOSL2 JASPAR yes 60824850
chr5 9456043 9456054 JUNB JASPAR yes 60824851
chr5 9456043 9456054 NFE2L2 JASPAR yes 60824852
chr5 9456043 9456054 FOSL2 JASPAR yes 70617565
chr5 9456043 9456054 JUNB JASPAR yes 70617566
chr5 9456043 9456054 NFE2L2 JASPAR yes 70617567
chr5 9456044 9456051 JUN TRANSFAC yes 60824853
chr5 9456044 9456051 JUN TRANSFAC yes 70617568
chr5 9456045 9456064 CTCF JASPAR yes 60824854
chr5 9456045 9456064 CTCF JASPAR yes 70617569
chr5 9456061 9456065 YY1 TRANSFAC yes 60824855
chr5 9456061 9456065 YY1 TRANSFAC yes 70617570
chr5 9456083 9456089 SOX10 JASPAR yes 60824856
chr5 9456083 9456089 SOX10 JASPAR yes 70617571
chr5 9456085 9456106 ZNF263 JASPAR yes 60824857
chr5 9456085 9456106 ZNF263 JASPAR yes 70617572
chr5 9456093 9456108 PRDM1 JASPAR yes 60824858
chr5 9456093 9456108 PRDM1 JASPAR yes 70617573
chr5 9456094 9456115 ZNF263 JASPAR yes 60824859
chr5 9456094 9456115 ZNF263 JASPAR yes 70617574
chr5 9456103 9456118 LEF1 JASPAR yes 60824860
chr5 9456103 9456118 LEF1 JASPAR yes 70617575
chr5 9456161 9456167 NFIC JASPAR yes 60824861
chr5 9456161 9456167 NFIC JASPAR yes 70617576
chr5 9456185 9456191 LEF1 TRANSFAC yes 60824862
chr5 9456185 9456191 SOX10 JASPAR yes 60824863
chr5 9456185 9456191 LEF1 TRANSFAC yes 70617577
chr5 9456185 9456191 SOX10 JASPAR yes 70617578
chr5 9456220 9456225 NFY TRANSFAC yes 60824864
chr5 9456220 9456225 NFY TRANSFAC yes 70617579
chr5 9456225 9456229 LFA1 TRANSFAC yes 60824865
chr5 9456225 9456229 LFA1 TRANSFAC yes 70617580
chr5 9456230 9456243 POU3F3 JASPAR yes 60824866
chr5 9456230 9456243 POU3F3 JASPAR yes 70617581
chr5 9456230 9456244 POU1F1 JASPAR yes 60824867
chr5 9456230 9456244 POU1F1 JASPAR yes 70617582
chr5 9456231 9456243 POU3F1 JASPAR yes 60824868
chr5 9456231 9456243 POU3F2 JASPAR yes 60824869
chr5 9456231 9456243 POU3F1 JASPAR yes 70617583
chr5 9456231 9456243 POU3F2 JASPAR yes 70617584
chr5 9456233 9456248 MEF2A JASPAR yes 60824870
chr5 9456233 9456248 MEF2A JASPAR yes 70617585
chr5 9456235 9456245 ALX3 JASPAR yes 60824871
chr5 9456235 9456245 ESX1 JASPAR yes 60824872
chr5 9456235 9456245 GSX1 JASPAR yes 60824873
chr5 9456235 9456245 GSX2 JASPAR yes 60824874
chr5 9456235 9456245 HOXB2 JASPAR yes 60824875
chr5 9456235 9456245 HOXB3 JASPAR yes 60824876
chr5 9456235 9456245 LBX2 JASPAR yes 60824877
chr5 9456235 9456245 LHX2 JASPAR yes 60824878
chr5 9456235 9456245 MEOX1 JASPAR yes 60824879
chr5 9456235 9456245 MEOX2 JASPAR yes 60824880
chr5 9456235 9456245 MIXL1 JASPAR yes 60824881
chr5 9456235 9456245 MNX1 JASPAR yes 60824882
chr5 9456235 9456245 NOTO JASPAR yes 60824883
chr5 9456235 9456245 ALX3 JASPAR yes 70617586
chr5 9456235 9456245 ESX1 JASPAR yes 70617587
chr5 9456235 9456245 GSX1 JASPAR yes 70617588
chr5 9456235 9456245 GSX2 JASPAR yes 70617589
chr5 9456235 9456245 HOXB2 JASPAR yes 70617590
chr5 9456235 9456245 HOXB3 JASPAR yes 70617591
chr5 9456235 9456245 LBX2 JASPAR yes 70617592
chr5 9456235 9456245 LHX2 JASPAR yes 70617593
chr5 9456235 9456245 MEOX1 JASPAR yes 70617594
chr5 9456235 9456245 MEOX2 JASPAR yes 70617595
chr5 9456235 9456245 MIXL1 JASPAR yes 70617596
chr5 9456235 9456245 MNX1 JASPAR yes 70617597
chr5 9456235 9456245 NOTO JASPAR yes 70617598
chr5 9456235 9456247 MEF2A JASPAR yes 60824884
chr5 9456235 9456247 MEF2B JASPAR yes 60824885
chr5 9456235 9456247 MEF2D JASPAR yes 60824886
chr5 9456235 9456247 MEF2A JASPAR yes 70617599
chr5 9456235 9456247 MEF2B JASPAR yes 70617600
chr5 9456235 9456247 MEF2D JASPAR yes 70617601
chr5 9456236 9456244 BSX JASPAR yes 60824887
chr5 9456236 9456244 DLX6 JASPAR yes 60824888
chr5 9456236 9456244 EN1 JASPAR yes 60824889
chr5 9456236 9456244 ISX JASPAR yes 60824890
chr5 9456236 9456244 LBX1 JASPAR yes 60824891
chr5 9456236 9456244 LHX9 JASPAR yes 60824892
chr5 9456236 9456244 LMX1A JASPAR yes 60824893
chr5 9456236 9456244 LMX1B JASPAR yes 60824894
chr5 9456236 9456244 NKX6-1 JASPAR yes 60824895
chr5 9456236 9456244 NKX6-2 JASPAR yes 60824896
chr5 9456236 9456244 PAX4 JASPAR yes 60824897
chr5 9456236 9456244 PDX1 JASPAR yes 60824898
chr5 9456236 9456244 PRRX1 JASPAR yes 60824899
chr5 9456236 9456244 RAX2 JASPAR yes 60824900
chr5 9456236 9456244 SHOX JASPAR yes 60824901
chr5 9456236 9456244 UNCX JASPAR yes 60824902
chr5 9456236 9456244 VAX1 JASPAR yes 60824903
chr5 9456236 9456244 VAX2 JASPAR yes 60824904
chr5 9456236 9456244 VSX1 JASPAR yes 60824905
chr5 9456236 9456244 VSX2 JASPAR yes 60824906
chr5 9456236 9456244 BSX JASPAR yes 70617602
chr5 9456236 9456244 DLX6 JASPAR yes 70617603
chr5 9456236 9456244 EN1 JASPAR yes 70617604
chr5 9456236 9456244 ISX JASPAR yes 70617605
chr5 9456236 9456244 LBX1 JASPAR yes 70617606
chr5 9456236 9456244 LHX9 JASPAR yes 70617607
chr5 9456236 9456244 LMX1A JASPAR yes 70617608
chr5 9456236 9456244 LMX1B JASPAR yes 70617609
chr5 9456236 9456244 NKX6-1 JASPAR yes 70617610
chr5 9456236 9456244 NKX6-2 JASPAR yes 70617611
chr5 9456236 9456244 PAX4 JASPAR yes 70617612
chr5 9456236 9456244 PDX1 JASPAR yes 70617613
chr5 9456236 9456244 PRRX1 JASPAR yes 70617614
chr5 9456236 9456244 RAX2 JASPAR yes 70617615
chr5 9456236 9456244 SHOX JASPAR yes 70617616
chr5 9456236 9456244 UNCX JASPAR yes 70617617
chr5 9456236 9456244 VAX1 JASPAR yes 70617618
chr5 9456236 9456244 VAX2 JASPAR yes 70617619
chr5 9456236 9456244 VSX1 JASPAR yes 70617620
chr5 9456236 9456244 VSX2 JASPAR yes 70617621
chr5 9456236 9456246 MEF2A JASPAR yes 60824907
chr5 9456236 9456246 MEF2A JASPAR yes 70617622
chr5 9456259 9456270 STAT1 JASPAR yes 60824908
chr5 9456259 9456270 STAT3 JASPAR yes 60824909
chr5 9456259 9456270 STAT1 JASPAR yes 70617623
chr5 9456259 9456270 STAT3 JASPAR yes 70617624
chr5 9456259 9456273 EBF1 JASPAR yes 60824910
chr5 9456259 9456273 EBF1 JASPAR yes 70617625
chr5 9456270 9456280 NFATC3 JASPAR yes 60824911
chr5 9456270 9456280 NFATC3 JASPAR yes 70617626
chr5 9456292 9456296 NFE TRANSFAC yes 60824912
chr5 9456292 9456296 NFE TRANSFAC yes 70617627
chr5 9456292 9456312 ESR1 JASPAR yes 60824913
chr5 9456292 9456312 ESR1 JASPAR yes 70617628
chr5 9456293 9456308 RUNX2 JASPAR yes 60824914
chr5 9456293 9456308 RUNX2 JASPAR yes 70617629
SNP sites on vista47009[chr5:9456049-9456295]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr5 9456096 rs73742526 G T
PRDM1 ZNF263
8076767
chr5 9456113 rs182734787 A G
LEF1 ZNF263
8076768
chr5 9456166 rs268542 A C
NFIC
8076769
Genes possibly regulated by vista47009[chr5:9456049-9456295]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr5 9035138 9546187 - SEMA5A ENSG00000112902.7 9546187 0.89 0.93 5244 10108
Expression level of Genes
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miRNAs possibly regulated by vista47009[chr5:9456049-9456295]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results