EnhancerDB
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  3. vista47098[chr5:14208730-14209007]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista47098[chr5:14208730-14209007]
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Tissue distribution of vista47098
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Transcription factor that possibly regulate vista47098[chr5:14208730-14209007]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr5 14208608 14209171 NFYB UCSC Txn Factor no Conserved 108534432
chr5 14208682 14208976 FOXA2 UCSC Txn Factor no Conserved 108534433
chr5 14208708 14208986 FOXA1 UCSC Txn Factor no Conserved 108534434
chr5 14208778 14208962 SRF UCSC Txn Factor no Conserved 108534435
chr5 14208734 14208737 MYB TRANSFAC yes 61023723
chr5 14208734 14208737 MYB TRANSFAC yes 70621662
chr5 14208740 14208754 POU1F1 JASPAR yes 61023724
chr5 14208740 14208754 POU1F1 JASPAR yes 70621663
chr5 14208742 14208750 FOXL1 JASPAR yes 61023725
chr5 14208742 14208750 FOXL1 JASPAR yes 70621664
chr5 14208751 14208754 MYB TRANSFAC yes 61023726
chr5 14208751 14208754 MYB TRANSFAC yes 70621665
chr5 14208763 14208766 MYB TRANSFAC yes 61023727
chr5 14208763 14208766 MYB TRANSFAC yes 70621666
chr5 14208779 14208790 NFIL3 JASPAR yes 61023728
chr5 14208779 14208790 NFIL3 JASPAR yes 70621667
chr5 14208784 14208787 MYB TRANSFAC yes 61023729
chr5 14208784 14208787 MYB TRANSFAC yes 70621668
chr5 14208786 14208804 MAFF JASPAR yes 61023730
chr5 14208786 14208804 MAFF JASPAR yes 70621669
chr5 14208788 14208799 NRL JASPAR yes 61023731
chr5 14208788 14208799 NRL JASPAR yes 70621670
chr5 14208788 14208803 MAFK JASPAR yes 61023732
chr5 14208788 14208803 MAFK JASPAR yes 70621671
chr5 14208794 14208801 JUN TRANSFAC yes 61023733
chr5 14208794 14208801 JUN TRANSFAC yes 70621672
chr5 14208794 14208807 SMAD2 JASPAR yes 61023734
chr5 14208794 14208807 SMAD2 JASPAR yes 70621673
chr5 14208798 14208813 NFYB JASPAR yes 61023735
chr5 14208798 14208813 NFYB JASPAR yes 70621674
chr5 14208800 14208816 NFYA JASPAR yes 61023736
chr5 14208800 14208816 NFYA JASPAR yes 70621675
chr5 14208801 14208819 NFYA JASPAR yes 61023737
chr5 14208801 14208819 NFYA JASPAR yes 70621676
chr5 14208805 14208809 H1TF2 TRANSFAC yes 61023738
chr5 14208805 14208809 NFE TRANSFAC yes 61023739
chr5 14208805 14208809 SRF TRANSFAC yes 61023740
chr5 14208805 14208809 H1TF2 TRANSFAC yes 70621677
chr5 14208805 14208809 NFE TRANSFAC yes 70621678
chr5 14208805 14208809 SRF TRANSFAC yes 70621679
chr5 14208812 14208824 NHLH1 JASPAR yes 61023741
chr5 14208812 14208824 NHLH1 JASPAR yes 70621680
chr5 14208813 14208823 NHLH1 JASPAR yes 61023742
chr5 14208813 14208823 NHLH1 JASPAR yes 70621681
chr5 14208857 14208875 SRF JASPAR yes 61023743
chr5 14208857 14208875 SRF JASPAR yes 70621682
chr5 14208884 14208894 HMBOX1 JASPAR yes 61023744
chr5 14208884 14208894 HMBOX1 JASPAR yes 70621683
chr5 14208886 14208889 MYB TRANSFAC yes 61023745
chr5 14208886 14208889 MYB TRANSFAC yes 70621684
chr5 14208890 14208895 MYC TRANSFAC yes 61023746
chr5 14208890 14208895 MYC TRANSFAC yes 70621685
chr5 14208909 14208930 IRF1 JASPAR yes 61023747
chr5 14208909 14208930 IRF1 JASPAR yes 70621686
chr5 14208911 14208926 STAT2 JASPAR yes 61023748
chr5 14208911 14208926 STAT2 JASPAR yes 70621687
chr5 14208918 14208922 YY1 TRANSFAC yes 61023749
chr5 14208918 14208922 YY1 TRANSFAC yes 70621688
chr5 14208943 14208953 ETV3 JASPAR yes 61023750
chr5 14208943 14208953 ETV3 JASPAR yes 70621689
chr5 14208945 14208954 NKX2-8 JASPAR yes 61023751
chr5 14208945 14208954 NKX2-8 JASPAR yes 70621690
chr5 14208945 14208955 NKX2-3 JASPAR yes 61023752
chr5 14208945 14208955 NKX2-3 JASPAR yes 70621691
chr5 14208951 14208966 HNF4A JASPAR yes 61023753
chr5 14208951 14208966 HNF4A JASPAR yes 70621692
chr5 14208952 14208966 NR2F1 JASPAR yes 61023754
chr5 14208952 14208966 RXRB JASPAR yes 61023755
chr5 14208952 14208966 RXRG JASPAR yes 61023756
chr5 14208952 14208966 NR2F1 JASPAR yes 70621693
chr5 14208952 14208966 RXRB JASPAR yes 70621694
chr5 14208952 14208966 RXRG JASPAR yes 70621695
chr5 14208952 14208967 HNF4G JASPAR yes 61023757
chr5 14208952 14208967 HNF4G JASPAR yes 70621696
chr5 14208958 14208977 CTCF JASPAR yes 61023758
chr5 14208958 14208977 CTCF JASPAR yes 70621697
chr5 14208981 14208994 ATF4 JASPAR yes 61023759
chr5 14208981 14208994 ATF4 JASPAR yes 70621698
chr5 14208981 14208996 JUND JASPAR yes 61023760
chr5 14208981 14208996 JUND JASPAR yes 70621699
chr5 14208982 14208995 JUN JASPAR yes 61023761
chr5 14208982 14208995 JUN JASPAR yes 70621700
chr5 14208989 14208993 YY1 TRANSFAC yes 61023762
chr5 14208989 14208993 YY1 TRANSFAC yes 70621701
SNP sites on vista47098[chr5:14208730-14209007]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr5 14208781 rs190467735 T A
FOXA1 FOXA2 NFIL3 NFYB SRF
8096235
chr5 14208920 rs171592 A G
FOXA1 FOXA2 IRF1 NFYB SRF STAT2 YY1
8096236
chr5 14208944 rs115454752 A C,G
ETV3 FOXA1 FOXA2 NFYB SRF
8096237
chr5 14208990 rs146637676 C G
ATF4 JUN JUND NFYB YY1
8096238
chr5 14208996 rs555749314 C T
JUND NFYB
8096239
chr5 14208997 rs562239169 G A,T
NFYB
8096240
Genes possibly regulated by vista47098[chr5:14208730-14209007]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr5 14143811 14532235 + TRIO ENSG00000038382.13 14143811 0.77 1.0 5256 35081
Expression level of Genes
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miRNAs possibly regulated by vista47098[chr5:14208730-14209007]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results