EnhancerDB
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  3. vista4712[chr1:204976101-204976640]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista4712[chr1:204976101-204976640]
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Tissue distribution of vista4712
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Transcription factor that possibly regulate vista4712[chr1:204976101-204976640]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr1 204976124 204976127 MYB TRANSFAC yes 118439278
chr1 204976125 204976135 TFAP4 JASPAR yes 118439279
chr1 204976135 204976150 MEF2C JASPAR yes 118439280
chr1 204976136 204976151 MEF2A JASPAR yes 118439281
chr1 204976137 204976149 MEF2B JASPAR yes 118439282
chr1 204976163 204976177 GLIS2 JASPAR yes 118439283
chr1 204976165 204976177 INSM1 JASPAR yes 118439284
chr1 204976191 204976212 ZNF263 JASPAR yes 118439285
chr1 204976192 204976207 ZIC3 JASPAR yes 118439286
chr1 204976198 204976208 ZNF740 JASPAR yes 118439287
chr1 204976200 204976215 NR2C2 JASPAR yes 118439288
chr1 204976200 204976221 ZNF263 JASPAR yes 118439289
chr1 204976223 204976232 VENTX JASPAR yes 118439290
chr1 204976223 204976233 EN2 JASPAR yes 118439291
chr1 204976223 204976233 ESX1 JASPAR yes 118439292
chr1 204976223 204976233 GBX1 JASPAR yes 118439293
chr1 204976223 204976233 GBX2 JASPAR yes 118439294
chr1 204976223 204976233 GSX1 JASPAR yes 118439295
chr1 204976223 204976233 GSX2 JASPAR yes 118439296
chr1 204976223 204976233 HESX1 JASPAR yes 118439297
chr1 204976223 204976233 HOXB3 JASPAR yes 118439298
chr1 204976223 204976233 LBX2 JASPAR yes 118439299
chr1 204976223 204976233 LHX2 JASPAR yes 118439300
chr1 204976223 204976233 MIXL1 JASPAR yes 118439301
chr1 204976223 204976233 MNX1 JASPAR yes 118439302
chr1 204976223 204976233 RAX JASPAR yes 118439303
chr1 204976224 204976228 H1TF2 TRANSFAC yes 118439304
chr1 204976224 204976228 NFE TRANSFAC yes 118439305
chr1 204976224 204976228 SRF TRANSFAC yes 118439306
chr1 204976224 204976232 BARX1 JASPAR yes 118439307
chr1 204976224 204976232 BSX JASPAR yes 118439308
chr1 204976224 204976232 DLX6 JASPAR yes 118439309
chr1 204976224 204976232 ISX JASPAR yes 118439310
chr1 204976224 204976232 LBX1 JASPAR yes 118439311
chr1 204976224 204976232 LHX9 JASPAR yes 118439312
chr1 204976224 204976232 MSX1 JASPAR yes 118439313
chr1 204976224 204976232 MSX2 JASPAR yes 118439314
chr1 204976224 204976232 NKX6-2 JASPAR yes 118439315
chr1 204976224 204976232 PRRX1 JASPAR yes 118439316
chr1 204976224 204976232 RAX2 JASPAR yes 118439317
chr1 204976224 204976232 SHOX JASPAR yes 118439318
chr1 204976224 204976232 UNCX JASPAR yes 118439319
chr1 204976234 204976238 LFA1 TRANSFAC yes 118439320
chr1 204976238 204976249 USF2 JASPAR yes 118439321
chr1 204976278 204976293 STAT2 JASPAR yes 118439322
chr1 204976300 204976315 AR JASPAR yes 118439323
chr1 204976303 204976312 NKX3-2 JASPAR yes 118439324
chr1 204976309 204976324 HNF4A JASPAR yes 118439325
chr1 204976310 204976325 HNF4G JASPAR yes 118439326
chr1 204976347 204976351 NFE TRANSFAC yes 118439327
chr1 204976353 204976368 MEF2C JASPAR yes 118439328
chr1 204976354 204976369 MEF2A JASPAR yes 118439329
chr1 204976355 204976367 MEF2A JASPAR yes 118439330
chr1 204976355 204976367 MEF2B JASPAR yes 118439331
chr1 204976355 204976367 MEF2D JASPAR yes 118439332
chr1 204976355 204976369 IRF7 JASPAR yes 118439333
chr1 204976356 204976366 MEF2A JASPAR yes 118439334
chr1 204976361 204976376 FOXP1 JASPAR yes 118439335
chr1 204976363 204976369 TBP TRANSFAC yes 118439336
chr1 204976363 204976374 FOXC1 JASPAR yes 118439337
chr1 204976363 204976375 FOXC2 JASPAR yes 118439338
chr1 204976364 204976378 ONECUT3 JASPAR yes 118439339
chr1 204976366 204976375 SRY JASPAR yes 118439340
chr1 204976369 204976378 VENTX JASPAR yes 118439341
chr1 204976369 204976379 EN2 JASPAR yes 118439342
chr1 204976369 204976379 ESX1 JASPAR yes 118439343
chr1 204976369 204976379 GBX2 JASPAR yes 118439344
chr1 204976370 204976378 BARX1 JASPAR yes 118439345
chr1 204976379 204976394 ESR2 JASPAR yes 118439346
chr1 204976379 204976399 ESR1 JASPAR yes 118439347
chr1 204976399 204976415 RFX4 JASPAR yes 118439348
chr1 204976425 204976431 GATA3 JASPAR yes 118439349
chr1 204976456 204976473 ESR1 JASPAR yes 118439350
chr1 204976456 204976474 ESR2 JASPAR yes 118439351
chr1 204976476 204976479 MYB TRANSFAC yes 118439352
chr1 204976485 204976500 NR2C2 JASPAR yes 118439353
chr1 204976498 204976502 LFA1 TRANSFAC yes 118439354
chr1 204976516 204976520 NFE TRANSFAC yes 118439355
chr1 204976524 204976545 ZNF263 JASPAR yes 118439356
chr1 204976526 204976547 ZNF263 JASPAR yes 118439357
chr1 204976527 204976548 ZNF263 JASPAR yes 118439358
chr1 204976529 204976550 ZNF263 JASPAR yes 118439359
chr1 204976531 204976552 ZNF263 JASPAR yes 118439360
chr1 204976532 204976553 ZNF263 JASPAR yes 118439361
chr1 204976534 204976555 ZNF263 JASPAR yes 118439362
chr1 204976537 204976558 ZNF263 JASPAR yes 118439363
chr1 204976538 204976545 CEBPA TRANSFAC yes 118439364
chr1 204976538 204976559 ZNF263 JASPAR yes 118439365
chr1 204976539 204976550 E2F6 JASPAR yes 118439366
chr1 204976540 204976561 ZNF263 JASPAR yes 118439367
chr1 204976541 204976562 ZNF263 JASPAR yes 118439368
chr1 204976542 204976563 ZNF263 JASPAR yes 118439369
chr1 204976543 204976548 ETS2 TRANSFAC yes 118439370
chr1 204976545 204976566 IRF1 JASPAR yes 118439371
chr1 204976545 204976566 ZNF263 JASPAR yes 118439372
chr1 204976547 204976568 ZNF263 JASPAR yes 118439373
chr1 204976548 204976569 ZNF263 JASPAR yes 118439374
chr1 204976549 204976554 ETS2 TRANSFAC yes 118439375
chr1 204976549 204976564 PRDM1 JASPAR yes 118439376
chr1 204976551 204976572 ZNF263 JASPAR yes 118439377
chr1 204976552 204976573 ZNF263 JASPAR yes 118439378
chr1 204976554 204976575 ZNF263 JASPAR yes 118439379
chr1 204976557 204976578 ZNF263 JASPAR yes 118439380
chr1 204976562 204976572 SP1 JASPAR yes 118439381
chr1 204976562 204976583 ZNF263 JASPAR yes 118439382
chr1 204976563 204976572 SP1 TRANSFAC yes 118439383
chr1 204976564 204976570 MAZ TRANSFAC yes 118439384
chr1 204976565 204976586 ZNF263 JASPAR yes 118439385
chr1 204976567 204976588 ZNF263 JASPAR yes 118439386
chr1 204976569 204976590 ZNF263 JASPAR yes 118439387
chr1 204976573 204976583 SP1 JASPAR yes 118439388
chr1 204976574 204976595 ZNF263 JASPAR yes 118439389
chr1 204976581 204976602 ZNF263 JASPAR yes 118439390
chr1 204976584 204976594 SP1 JASPAR yes 118439391
chr1 204976584 204976605 ZNF263 JASPAR yes 118439392
chr1 204976589 204976610 ZNF263 JASPAR yes 118439393
chr1 204976591 204976612 ZNF263 JASPAR yes 118439394
chr1 204976594 204976615 ZNF263 JASPAR yes 118439395
chr1 204976598 204976603 NFY TRANSFAC yes 118439396
chr1 204976598 204976612 E2F7 JASPAR yes 118439397
chr1 204976599 204976611 E2F8 JASPAR yes 118439398
chr1 204976603 204976624 ZNF263 JASPAR yes 118439399
chr1 204976604 204976625 ZNF263 JASPAR yes 118439400
chr1 204976605 204976610 ETS2 TRANSFAC yes 118439401
chr1 204976606 204976627 ZNF263 JASPAR yes 118439402
chr1 204976607 204976622 FOXP1 JASPAR yes 118439403
chr1 204976608 204976629 IRF1 JASPAR yes 118439404
chr1 204976609 204976630 ZNF263 JASPAR yes 118439405
chr1 204976612 204976627 PRDM1 JASPAR yes 118439406
chr1 204976612 204976627 STAT2 JASPAR yes 118439407
chr1 204976612 204976630 IRF2 JASPAR yes 118439408
chr1 204976612 204976633 ZNF263 JASPAR yes 118439409
chr1 204976613 204976634 ZNF263 JASPAR yes 118439410
chr1 204976615 204976636 ZNF263 JASPAR yes 118439411
chr1 204976616 204976637 ZNF263 JASPAR yes 118439412
chr1 204976617 204976638 ZNF263 JASPAR yes 118439413
chr1 204976623 204976629 MAZ TRANSFAC yes 118439414
chr1 204976623 204976634 E2F6 JASPAR yes 118439415
chr1 204976625 204976633 SP1 TRANSFAC yes 118439416
chr1 204976627 204976633 MAZ TRANSFAC yes 118439417
chr1 204976627 204976638 E2F6 JASPAR yes 118439418
chr1 204976631 204976636 ETS2 TRANSFAC yes 118439419
chr1 204976634 204976639 ETS2 TRANSFAC yes 118439420
SNP sites on vista4712[chr1:204976101-204976640]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr1 204976138 rs2802842 G A
MEF2A MEF2B MEF2C
880391
chr1 204976206 rs73071276 T C
NR2C2 ZIC3 ZNF263 ZNF740
880392
chr1 204976242 rs567723655 A G
USF2
880393
chr1 204976264 rs2595942 G C no 880394
chr1 204976363 rs2802843 T A
FOXC1 FOXC2 FOXP1 IRF7 MEF2A MEF2B MEF2C MEF2D TBP
880395
chr1 204976364 rs539590234 T A
FOXC1 FOXC2 FOXP1 IRF7 MEF2A MEF2B MEF2C MEF2D ONECUT3 TBP
880396
chr1 204976364 rs556899822 T TA
FOXC1 FOXC2 FOXP1 IRF7 MEF2A MEF2B MEF2C MEF2D ONECUT3 TBP
880397
chr1 204976372 rs185721777 C A
BARX1 EN2 ESX1 FOXC1 FOXC2 FOXP1 GBX2 ONECUT3 SRY VENTX
880398
chr1 204976387 rs566121650 G A
ESR1 ESR2
880399
chr1 204976478 rs146861772 A AAC
MYB
880400
chr1 204976514 rs560835013 ACT A no 880401
chr1 204976573 rs73071281 A G
SP1 ZNF263
880402
Genes possibly regulated by vista4712[chr1:204976101-204976640]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr1 205012325 205047627 + CNTN2 ENSG00000184144.5 205012325 0.92 1.0 1757 64315
chr1 205052258 205053645 - TMEM81 ENSG00000174529.6 205053645 0.65 1.0 1758 22995
Expression level of Genes
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miRNAs possibly regulated by vista4712[chr1:204976101-204976640]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results