EnhancerDB
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  3. vista472[chr1:15587144-15587415]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista472[chr1:15587144-15587415]
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Tissue distribution of vista472
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Transcription factor that possibly regulate vista472[chr1:15587144-15587415]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr1 15587145 15587149 H1TF2 TRANSFAC yes 26975871
chr1 15587145 15587149 NFE TRANSFAC yes 26975872
chr1 15587145 15587149 SRF TRANSFAC yes 26975873
chr1 15587145 15587149 H1TF2 TRANSFAC yes 118235971
chr1 15587145 15587149 NFE TRANSFAC yes 118235972
chr1 15587145 15587149 SRF TRANSFAC yes 118235973
chr1 15587169 15587177 GATA3 JASPAR yes 26975874
chr1 15587169 15587177 GATA3 JASPAR yes 118235974
chr1 15587187 15587196 SOX9 JASPAR yes 26975875
chr1 15587187 15587196 SOX9 JASPAR yes 118235975
chr1 15587215 15587232 RXRA JASPAR yes 26975876
chr1 15587215 15587232 RXRA JASPAR yes 118235976
chr1 15587216 15587234 ESR2 JASPAR yes 26975877
chr1 15587216 15587234 ESR2 JASPAR yes 118235977
chr1 15587217 15587232 ESR2 JASPAR yes 26975878
chr1 15587217 15587232 ESR2 JASPAR yes 118235978
chr1 15587218 15587223 H4TF1 TRANSFAC yes 26975879
chr1 15587218 15587223 H4TF1 TRANSFAC yes 118235979
chr1 15587234 15587247 SMAD2 JASPAR yes 26975880
chr1 15587234 15587247 SMAD2 JASPAR yes 118235980
chr1 15587236 15587247 JUNB JASPAR yes 26975881
chr1 15587236 15587247 JUNB JASPAR yes 118235981
chr1 15587237 15587248 FOS JASPAR yes 26975882
chr1 15587237 15587248 FOSL1 JASPAR yes 26975883
chr1 15587237 15587248 JUND JASPAR yes 26975884
chr1 15587237 15587248 NFE2 JASPAR yes 26975885
chr1 15587237 15587248 FOS JASPAR yes 118235982
chr1 15587237 15587248 FOSL1 JASPAR yes 118235983
chr1 15587237 15587248 JUND JASPAR yes 118235984
chr1 15587237 15587248 NFE2 JASPAR yes 118235985
chr1 15587238 15587247 JDP2 JASPAR yes 26975886
chr1 15587238 15587247 JDP2 JASPAR yes 118235986
chr1 15587238 15587249 FOSL2 JASPAR yes 26975887
chr1 15587238 15587249 JUNB JASPAR yes 26975888
chr1 15587238 15587249 FOSL2 JASPAR yes 118235987
chr1 15587238 15587249 JUNB JASPAR yes 118235988
chr1 15587238 15587252 JUN JASPAR yes 26975889
chr1 15587238 15587252 JUN JASPAR yes 118235989
chr1 15587239 15587250 BATF JASPAR yes 26975890
chr1 15587239 15587250 BATF JASPAR yes 118235990
chr1 15587259 15587274 PRDM1 JASPAR yes 26975891
chr1 15587259 15587274 PRDM1 JASPAR yes 118235991
chr1 15587273 15587279 LEF1 TRANSFAC yes 26975892
chr1 15587273 15587279 SOX10 JASPAR yes 26975893
chr1 15587273 15587279 LEF1 TRANSFAC yes 118235992
chr1 15587273 15587279 SOX10 JASPAR yes 118235993
chr1 15587273 15587288 FOXP1 JASPAR yes 26975894
chr1 15587273 15587288 FOXP1 JASPAR yes 118235994
chr1 15587278 15587288 HOXA13 JASPAR yes 26975895
chr1 15587278 15587288 HOXA13 JASPAR yes 118235995
chr1 15587287 15587298 USF2 JASPAR yes 26975896
chr1 15587287 15587298 USF2 JASPAR yes 118235996
chr1 15587288 15587298 MAX JASPAR yes 26975897
chr1 15587288 15587298 MLX JASPAR yes 26975898
chr1 15587288 15587298 TFE3 JASPAR yes 26975899
chr1 15587288 15587298 TFEB JASPAR yes 26975900
chr1 15587288 15587298 TFEC JASPAR yes 26975901
chr1 15587288 15587298 MAX JASPAR yes 118235997
chr1 15587288 15587298 MLX JASPAR yes 118235998
chr1 15587288 15587298 TFE3 JASPAR yes 118235999
chr1 15587288 15587298 TFEB JASPAR yes 118236000
chr1 15587288 15587298 TFEC JASPAR yes 118236001
chr1 15587289 15587299 MAX JASPAR yes 26975902
chr1 15587289 15587299 MAX JASPAR yes 118236002
chr1 15587290 15587295 MYC TRANSFAC yes 26975903
chr1 15587290 15587295 USF1 TRANSFAC yes 26975904
chr1 15587290 15587295 USF2 TRANSFAC yes 26975905
chr1 15587290 15587295 MYC TRANSFAC yes 118236003
chr1 15587290 15587295 USF1 TRANSFAC yes 118236004
chr1 15587290 15587295 USF2 TRANSFAC yes 118236005
chr1 15587290 15587297 USF1 JASPAR yes 26975906
chr1 15587290 15587297 USF1 JASPAR yes 118236006
chr1 15587314 15587319 GATA2 JASPAR yes 26975907
chr1 15587314 15587319 GATA2 JASPAR yes 118236007
chr1 15587316 15587324 RHOXF1 JASPAR yes 26975908
chr1 15587316 15587324 RHOXF1 JASPAR yes 118236008
chr1 15587327 15587330 MYB TRANSFAC yes 26975909
chr1 15587327 15587330 MYB TRANSFAC yes 118236009
chr1 15587339 15587360 MAFG JASPAR yes 26975910
chr1 15587339 15587360 MAFG JASPAR yes 118236010
chr1 15587340 15587354 JUN JASPAR yes 26975911
chr1 15587340 15587354 JUN JASPAR yes 118236011
chr1 15587342 15587353 BATF JASPAR yes 26975912
chr1 15587342 15587353 BATF JASPAR yes 118236012
chr1 15587343 15587354 FOSL2 JASPAR yes 26975913
chr1 15587343 15587354 JUNB JASPAR yes 26975914
chr1 15587343 15587354 FOSL2 JASPAR yes 118236013
chr1 15587343 15587354 JUNB JASPAR yes 118236014
chr1 15587344 15587355 FOS JASPAR yes 26975915
chr1 15587344 15587355 FOSL1 JASPAR yes 26975916
chr1 15587344 15587355 JUND JASPAR yes 26975917
chr1 15587344 15587355 NFE2 JASPAR yes 26975918
chr1 15587344 15587355 FOS JASPAR yes 118236015
chr1 15587344 15587355 FOSL1 JASPAR yes 118236016
chr1 15587344 15587355 JUND JASPAR yes 118236017
chr1 15587344 15587355 NFE2 JASPAR yes 118236018
chr1 15587345 15587354 JDP2 JASPAR yes 26975919
chr1 15587345 15587354 JDP2 JASPAR yes 118236019
chr1 15587345 15587356 FOSL2 JASPAR yes 26975920
chr1 15587345 15587356 JUNB JASPAR yes 26975921
chr1 15587345 15587356 FOSL2 JASPAR yes 118236020
chr1 15587345 15587356 JUNB JASPAR yes 118236021
chr1 15587345 15587359 JUN JASPAR yes 26975922
chr1 15587345 15587359 JUN JASPAR yes 118236022
chr1 15587346 15587357 BATF JASPAR yes 26975923
chr1 15587346 15587357 BATF JASPAR yes 118236023
chr1 15587350 15587364 GATA2 JASPAR yes 26975924
chr1 15587350 15587364 GATA2 JASPAR yes 118236024
chr1 15587376 15587394 SRF JASPAR yes 26975925
chr1 15587376 15587394 SRF JASPAR yes 118236025
chr1 15587378 15587394 SRF JASPAR yes 26975926
chr1 15587378 15587394 SRF JASPAR yes 118236026
chr1 15587378 15587396 SRF JASPAR yes 26975927
chr1 15587378 15587396 SRF JASPAR yes 118236027
chr1 15587405 15587422 BCL6B JASPAR yes 26975928
chr1 15587405 15587422 BCL6B JASPAR yes 118236028
chr1 15587413 15587423 GSC2 JASPAR yes 26975929
chr1 15587413 15587423 GSC JASPAR yes 26975930
chr1 15587413 15587423 GSC2 JASPAR yes 118236029
chr1 15587413 15587423 GSC JASPAR yes 118236030
chr1 15587414 15587422 OTX1 JASPAR yes 26975931
chr1 15587414 15587422 OTX1 JASPAR yes 118236031
chr1 15587414 15587423 PITX3 JASPAR yes 26975932
chr1 15587414 15587423 PITX3 JASPAR yes 118236032
SNP sites on vista472[chr1:15587144-15587415]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr1 15587154 rs77798531 G A no 103938
chr1 15587348 rs56722038 G C,T
BATF FOS FOSL1 FOSL2 JDP2 JUN JUNB JUND MAFG NFE2
103939
chr1 15587356 rs559652540 G A
BATF FOSL2 GATA2 JUN JUNB MAFG
103940
Genes possibly regulated by vista472[chr1:15587144-15587415]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr1 15490840 15497813 - C1orf195 ENSG00000204464.3 15497813 0.87 1.0 203 10669
chr1 15573768 15726779 + FHAD1 ENSG00000142621.15 15573768 0.93 1.0 204 86624
Expression level of Genes
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miRNAs possibly regulated by vista472[chr1:15587144-15587415]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results