EnhancerDB
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  3. vista4725[chr1:205227547-205227721]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista4725[chr1:205227547-205227721]
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Tissue distribution of vista4725
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Transcription factor that possibly regulate vista4725[chr1:205227547-205227721]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr1 205227552 205227562 MAX JASPAR yes 34748300
chr1 205227552 205227562 MAX JASPAR yes 118439934
chr1 205227552 205227564 HES5 JASPAR yes 34748301
chr1 205227552 205227564 HES5 JASPAR yes 118439935
chr1 205227553 205227563 CLOCK JASPAR yes 34748302
chr1 205227553 205227563 MAX JASPAR yes 34748303
chr1 205227553 205227563 MLXIPL JASPAR yes 34748304
chr1 205227553 205227563 MLX JASPAR yes 34748305
chr1 205227553 205227563 MNT JASPAR yes 34748306
chr1 205227553 205227563 TFE3 JASPAR yes 34748307
chr1 205227553 205227563 TFEB JASPAR yes 34748308
chr1 205227553 205227563 TFEC JASPAR yes 34748309
chr1 205227553 205227563 CLOCK JASPAR yes 118439936
chr1 205227553 205227563 MAX JASPAR yes 118439937
chr1 205227553 205227563 MLXIPL JASPAR yes 118439938
chr1 205227553 205227563 MLX JASPAR yes 118439939
chr1 205227553 205227563 MNT JASPAR yes 118439940
chr1 205227553 205227563 TFE3 JASPAR yes 118439941
chr1 205227553 205227563 TFEB JASPAR yes 118439942
chr1 205227553 205227563 TFEC JASPAR yes 118439943
chr1 205227554 205227564 MAX JASPAR yes 34748310
chr1 205227554 205227564 MAX JASPAR yes 118439944
chr1 205227555 205227560 MYC TRANSFAC yes 34748311
chr1 205227555 205227560 USF1 TRANSFAC yes 34748312
chr1 205227555 205227560 USF2 TRANSFAC yes 34748313
chr1 205227555 205227560 MYC TRANSFAC yes 118439945
chr1 205227555 205227560 USF1 TRANSFAC yes 118439946
chr1 205227555 205227560 USF2 TRANSFAC yes 118439947
chr1 205227555 205227562 USF1 JASPAR yes 34748314
chr1 205227555 205227562 USF1 JASPAR yes 118439948
chr1 205227569 205227580 EBF1 JASPAR yes 34748315
chr1 205227569 205227580 EBF1 JASPAR yes 118439949
chr1 205227601 205227610 VENTX JASPAR yes 34748316
chr1 205227601 205227610 VENTX JASPAR yes 118439950
chr1 205227601 205227611 ALX3 JASPAR yes 34748317
chr1 205227601 205227611 ESX1 JASPAR yes 34748318
chr1 205227601 205227611 GBX2 JASPAR yes 34748319
chr1 205227601 205227611 GSX1 JASPAR yes 34748320
chr1 205227601 205227611 GSX2 JASPAR yes 34748321
chr1 205227601 205227611 HESX1 JASPAR yes 34748322
chr1 205227601 205227611 HOXB3 JASPAR yes 34748323
chr1 205227601 205227611 LBX2 JASPAR yes 34748324
chr1 205227601 205227611 LHX2 JASPAR yes 34748325
chr1 205227601 205227611 MIXL1 JASPAR yes 34748326
chr1 205227601 205227611 MNX1 JASPAR yes 34748327
chr1 205227601 205227611 RAX JASPAR yes 34748328
chr1 205227601 205227611 ALX3 JASPAR yes 118439951
chr1 205227601 205227611 ESX1 JASPAR yes 118439952
chr1 205227601 205227611 GBX2 JASPAR yes 118439953
chr1 205227601 205227611 GSX1 JASPAR yes 118439954
chr1 205227601 205227611 GSX2 JASPAR yes 118439955
chr1 205227601 205227611 HESX1 JASPAR yes 118439956
chr1 205227601 205227611 HOXB3 JASPAR yes 118439957
chr1 205227601 205227611 LBX2 JASPAR yes 118439958
chr1 205227601 205227611 LHX2 JASPAR yes 118439959
chr1 205227601 205227611 MIXL1 JASPAR yes 118439960
chr1 205227601 205227611 MNX1 JASPAR yes 118439961
chr1 205227601 205227611 RAX JASPAR yes 118439962
chr1 205227602 205227606 H1TF2 TRANSFAC yes 34748329
chr1 205227602 205227606 NFE TRANSFAC yes 34748330
chr1 205227602 205227606 SRF TRANSFAC yes 34748331
chr1 205227602 205227606 H1TF2 TRANSFAC yes 118439963
chr1 205227602 205227606 NFE TRANSFAC yes 118439964
chr1 205227602 205227606 SRF TRANSFAC yes 118439965
chr1 205227602 205227610 BARX1 JASPAR yes 34748332
chr1 205227602 205227610 BSX JASPAR yes 34748333
chr1 205227602 205227610 DLX6 JASPAR yes 34748334
chr1 205227602 205227610 ISX JASPAR yes 34748335
chr1 205227602 205227610 LBX1 JASPAR yes 34748336
chr1 205227602 205227610 LHX9 JASPAR yes 34748337
chr1 205227602 205227610 MSX1 JASPAR yes 34748338
chr1 205227602 205227610 MSX2 JASPAR yes 34748339
chr1 205227602 205227610 NKX6-2 JASPAR yes 34748340
chr1 205227602 205227610 PRRX1 JASPAR yes 34748341
chr1 205227602 205227610 RAX2 JASPAR yes 34748342
chr1 205227602 205227610 SHOX JASPAR yes 34748343
chr1 205227602 205227610 UNCX JASPAR yes 34748344
chr1 205227602 205227610 BARX1 JASPAR yes 118439966
chr1 205227602 205227610 BSX JASPAR yes 118439967
chr1 205227602 205227610 DLX6 JASPAR yes 118439968
chr1 205227602 205227610 ISX JASPAR yes 118439969
chr1 205227602 205227610 LBX1 JASPAR yes 118439970
chr1 205227602 205227610 LHX9 JASPAR yes 118439971
chr1 205227602 205227610 MSX1 JASPAR yes 118439972
chr1 205227602 205227610 MSX2 JASPAR yes 118439973
chr1 205227602 205227610 NKX6-2 JASPAR yes 118439974
chr1 205227602 205227610 PRRX1 JASPAR yes 118439975
chr1 205227602 205227610 RAX2 JASPAR yes 118439976
chr1 205227602 205227610 SHOX JASPAR yes 118439977
chr1 205227602 205227610 UNCX JASPAR yes 118439978
chr1 205227602 205227612 HOXA13 JASPAR yes 34748345
chr1 205227602 205227612 HOXB13 JASPAR yes 34748346
chr1 205227602 205227612 HOXD13 JASPAR yes 34748347
chr1 205227602 205227612 HOXA13 JASPAR yes 118439979
chr1 205227602 205227612 HOXB13 JASPAR yes 118439980
chr1 205227602 205227612 HOXD13 JASPAR yes 118439981
chr1 205227624 205227645 ZNF263 JASPAR yes 34748348
chr1 205227624 205227645 ZNF263 JASPAR yes 118439982
chr1 205227631 205227641 ZNF740 JASPAR yes 34748349
chr1 205227631 205227641 ZNF740 JASPAR yes 118439983
chr1 205227639 205227653 PLAG1 JASPAR yes 34748350
chr1 205227639 205227653 PLAG1 JASPAR yes 118439984
chr1 205227640 205227654 PLAG1 JASPAR yes 34748351
chr1 205227640 205227654 PLAG1 JASPAR yes 118439985
chr1 205227646 205227665 CTCF JASPAR yes 34748352
chr1 205227646 205227665 CTCF JASPAR yes 118439986
chr1 205227647 205227656 ZEB1 JASPAR yes 34748353
chr1 205227647 205227656 ZEB1 JASPAR yes 118439987
chr1 205227648 205227658 TCF4 JASPAR yes 34748354
chr1 205227648 205227658 TCF4 JASPAR yes 118439988
chr1 205227650 205227655 USF2 TRANSFAC yes 34748355
chr1 205227650 205227655 USF2 TRANSFAC yes 118439989
chr1 205227655 205227676 REST JASPAR yes 34748356
chr1 205227655 205227676 REST JASPAR yes 118439990
chr1 205227656 205227675 REST JASPAR yes 34748357
chr1 205227656 205227675 REST JASPAR yes 118439991
chr1 205227666 205227670 ESR1 TRANSFAC yes 34748358
chr1 205227666 205227670 ESR1 TRANSFAC yes 118439992
chr1 205227667 205227677 TFAP4 JASPAR yes 34748359
chr1 205227667 205227677 TFAP4 JASPAR yes 118439993
chr1 205227676 205227687 NFE2 JASPAR yes 34748360
chr1 205227676 205227687 NFE2 JASPAR yes 118439994
chr1 205227677 205227686 JDP2 JASPAR yes 34748361
chr1 205227677 205227686 JDP2 JASPAR yes 118439995
chr1 205227702 205227713 ELK4 JASPAR yes 34748362
chr1 205227702 205227713 FLI1 JASPAR yes 34748363
chr1 205227702 205227713 ELK4 JASPAR yes 118439996
chr1 205227702 205227713 FLI1 JASPAR yes 118439997
chr1 205227703 205227713 GABPA JASPAR yes 34748364
chr1 205227703 205227713 GABPA JASPAR yes 118439998
chr1 205227703 205227714 ELF5 JASPAR yes 34748365
chr1 205227703 205227714 ETV2 JASPAR yes 34748366
chr1 205227703 205227714 ELF5 JASPAR yes 118439999
chr1 205227703 205227714 ETV2 JASPAR yes 118440000
chr1 205227703 205227716 ELF1 JASPAR yes 34748367
chr1 205227703 205227716 ELF1 JASPAR yes 118440001
chr1 205227713 205227723 GCM2 JASPAR yes 34748368
chr1 205227713 205227723 GCM2 JASPAR yes 118440002
chr1 205227721 205227726 GATA2 JASPAR yes 34748369
chr1 205227721 205227726 GATA2 JASPAR yes 118440003
SNP sites on vista4725[chr1:205227547-205227721]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr1 205227613 rs114511751 C G,T no 881537
chr1 205227627 rs61823995 T C
ZNF263
881538
Genes possibly regulated by vista4725[chr1:205227547-205227721]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr1 205111632 205180727 - DSTYK ENSG00000133059.12 205180727 0.65 0.99 1760 53180
chr1 205197304 205242471 + TMCC2 ENSG00000133069.10 205197304 0.81 1.0 1761 69757
chr1 205271187 205290883 - NUAK2 ENSG00000163545.7 205290883 0.81 0.97 1762 36838
chr1 205305220 205326218 - KLHDC8A ENSG00000162873.10 205326218 1.0 0.95 1763 1503
Expression level of Genes
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miRNAs possibly regulated by vista4725[chr1:205227547-205227721]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results