EnhancerDB
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  3. vista4727[chr1:205253892-205254222]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista4727[chr1:205253892-205254222]
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Tissue distribution of vista4727
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Transcription factor that possibly regulate vista4727[chr1:205253892-205254222]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr1 205253787 205254187 YY1 UCSC Txn Factor no Conserved 107861380
chr1 205253802 205254278 TCF12 UCSC Txn Factor no Conserved 107861387
chr1 205253830 205254158 JUND UCSC Txn Factor no Conserved 107861401
chr1 205253831 205254284 EP300 UCSC Txn Factor no Conserved 107861404
chr1 205253835 205254189 FOSL2 UCSC Txn Factor no Conserved 107861405
chr1 205253868 205254143 FOS UCSC Txn Factor no Conserved 107861421
chr1 205253944 205254320 TCF7L2 UCSC Txn Factor no Conserved 107861464
chr1 205253993 205254251 CEBPB UCSC Txn Factor no Conserved 107861472
chr1 205254003 205254253 RUNX3 UCSC Txn Factor no Conserved 107861474
chr1 205253891 205253901 NFATC3 JASPAR yes 34751388
chr1 205253891 205253901 NFATC3 JASPAR yes 118440036
chr1 205253893 205253900 NFATC2 JASPAR yes 34751389
chr1 205253893 205253900 NFATC2 JASPAR yes 118440037
chr1 205253897 205253917 TP63 JASPAR yes 34751390
chr1 205253897 205253917 TP63 JASPAR yes 118440038
chr1 205253901 205253910 THAP1 JASPAR yes 34751391
chr1 205253901 205253910 THAP1 JASPAR yes 118440039
chr1 205253920 205253935 TFAP2A JASPAR yes 34751392
chr1 205253920 205253935 TFAP2C JASPAR yes 34751393
chr1 205253920 205253935 TFAP2A JASPAR yes 118440040
chr1 205253920 205253935 TFAP2C JASPAR yes 118440041
chr1 205253936 205253957 ZNF263 JASPAR yes 34751394
chr1 205253936 205253957 ZNF263 JASPAR yes 118440042
chr1 205253947 205253957 SP1 JASPAR yes 34751395
chr1 205253947 205253957 SP1 JASPAR yes 118440043
chr1 205253949 205253968 CTCF JASPAR yes 34751396
chr1 205253949 205253968 CTCF JASPAR yes 118440044
chr1 205253951 205253962 EBF1 JASPAR yes 34751397
chr1 205253951 205253962 EBF1 JASPAR yes 118440045
chr1 205253951 205253964 TFAP2A JASPAR yes 34751398
chr1 205253951 205253964 TFAP2B JASPAR yes 34751399
chr1 205253951 205253964 TFAP2C JASPAR yes 34751400
chr1 205253951 205253964 TFAP2A JASPAR yes 118440046
chr1 205253951 205253964 TFAP2B JASPAR yes 118440047
chr1 205253951 205253964 TFAP2C JASPAR yes 118440048
chr1 205253973 205253993 ESR1 JASPAR yes 34751401
chr1 205253973 205253993 ESR1 JASPAR yes 118440049
chr1 205253984 205253995 FOSL2 JASPAR yes 34751402
chr1 205253984 205253995 JUNB JASPAR yes 34751403
chr1 205253984 205253995 FOSL2 JASPAR yes 118440050
chr1 205253984 205253995 JUNB JASPAR yes 118440051
chr1 205253985 205253996 FOS JASPAR yes 34751404
chr1 205253985 205253996 FOSL1 JASPAR yes 34751405
chr1 205253985 205253996 JUND JASPAR yes 34751406
chr1 205253985 205253996 NFE2 JASPAR yes 34751407
chr1 205253985 205253996 FOS JASPAR yes 118440052
chr1 205253985 205253996 FOSL1 JASPAR yes 118440053
chr1 205253985 205253996 JUND JASPAR yes 118440054
chr1 205253985 205253996 NFE2 JASPAR yes 118440055
chr1 205253986 205253995 JDP2 JASPAR yes 34751408
chr1 205253986 205253995 JDP2 JASPAR yes 118440056
chr1 205253986 205253997 FOSL2 JASPAR yes 34751409
chr1 205253986 205253997 JUNB JASPAR yes 34751410
chr1 205253986 205253997 FOSL2 JASPAR yes 118440057
chr1 205253986 205253997 JUNB JASPAR yes 118440058
chr1 205253986 205254000 JUN JASPAR yes 34751411
chr1 205253986 205254000 JUN JASPAR yes 118440059
chr1 205253997 205254008 FOSL2 JASPAR yes 34751412
chr1 205253997 205254008 FOSL2 JASPAR yes 118440060
chr1 205253998 205254010 YY1 JASPAR yes 34751413
chr1 205253998 205254010 YY1 JASPAR yes 118440061
chr1 205254001 205254007 YY1 JASPAR yes 34751414
chr1 205254001 205254007 YY1 JASPAR yes 118440062
chr1 205254005 205254026 ZNF263 JASPAR yes 34751415
chr1 205254005 205254026 ZNF263 JASPAR yes 118440063
chr1 205254006 205254016 MZF1 JASPAR yes 34751416
chr1 205254006 205254016 MZF1 JASPAR yes 118440064
chr1 205254009 205254015 SP1 TRANSFAC yes 34751417
chr1 205254009 205254015 SP1 TRANSFAC yes 118440065
chr1 205254009 205254019 SP1 JASPAR yes 34751418
chr1 205254009 205254019 SP1 JASPAR yes 118440066
chr1 205254009 205254029 RREB1 JASPAR yes 34751419
chr1 205254009 205254029 RREB1 JASPAR yes 118440067
chr1 205254010 205254020 ZNF740 JASPAR yes 34751420
chr1 205254010 205254020 ZNF740 JASPAR yes 118440068
chr1 205254013 205254019 MZF1 JASPAR yes 34751421
chr1 205254013 205254019 MZF1 JASPAR yes 118440069
chr1 205254019 205254025 SP1 TRANSFAC yes 34751422
chr1 205254019 205254025 SP1 TRANSFAC yes 118440070
chr1 205254035 205254043 UEF1 TRANSFAC yes 34751423
chr1 205254035 205254043 UEF1 TRANSFAC yes 118440071
chr1 205254036 205254044 MEIS2 JASPAR yes 34751424
chr1 205254036 205254044 MEIS3 JASPAR yes 34751425
chr1 205254036 205254044 MEIS2 JASPAR yes 118440072
chr1 205254036 205254044 MEIS3 JASPAR yes 118440073
chr1 205254071 205254081 SP1 JASPAR yes 34751426
chr1 205254071 205254081 SP1 JASPAR yes 118440074
chr1 205254090 205254101 FLI1 JASPAR yes 34751427
chr1 205254090 205254101 FLI1 JASPAR yes 118440075
chr1 205254094 205254101 SPIB JASPAR yes 34751428
chr1 205254094 205254101 SPIB JASPAR yes 118440076
chr1 205254128 205254139 CEBPA JASPAR yes 34751429
chr1 205254128 205254139 CEBPA JASPAR yes 118440077
chr1 205254129 205254139 CEBPB JASPAR yes 34751430
chr1 205254129 205254139 CEBPD JASPAR yes 34751431
chr1 205254129 205254139 CEBPE JASPAR yes 34751432
chr1 205254129 205254139 CEBPB JASPAR yes 118440078
chr1 205254129 205254139 CEBPD JASPAR yes 118440079
chr1 205254129 205254139 CEBPE JASPAR yes 118440080
chr1 205254140 205254155 LEF1 JASPAR yes 34751433
chr1 205254140 205254155 LEF1 JASPAR yes 118440081
chr1 205254150 205254161 TBX20 JASPAR yes 34751434
chr1 205254150 205254161 TBX20 JASPAR yes 118440082
chr1 205254155 205254164 NKX2-8 JASPAR yes 34751435
chr1 205254155 205254164 NKX2-8 JASPAR yes 118440083
chr1 205254159 205254180 ZNF263 JASPAR yes 34751436
chr1 205254159 205254180 ZNF263 JASPAR yes 118440084
chr1 205254163 205254174 E2F6 JASPAR yes 34751437
chr1 205254163 205254174 E2F6 JASPAR yes 118440085
chr1 205254176 205254183 MEIS1 JASPAR yes 34751438
chr1 205254176 205254183 MEIS1 JASPAR yes 118440086
chr1 205254176 205254184 MEIS2 JASPAR yes 34751439
chr1 205254176 205254184 MEIS3 JASPAR yes 34751440
chr1 205254176 205254184 MEIS2 JASPAR yes 118440087
chr1 205254176 205254184 MEIS3 JASPAR yes 118440088
chr1 205254177 205254189 PKNOX2 JASPAR yes 34751441
chr1 205254177 205254189 PKNOX2 JASPAR yes 118440089
chr1 205254178 205254188 ID4 JASPAR yes 34751442
chr1 205254178 205254188 ID4 JASPAR yes 118440090
chr1 205254212 205254218 SOX10 JASPAR yes 34751443
chr1 205254212 205254218 SOX10 JASPAR yes 118440091
SNP sites on vista4727[chr1:205253892-205254222]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr1 205253945 rs146195939 G A
EP300 FOS FOSL2 JUND TCF12 TCF7L2 YY1 ZNF263
881820
chr1 205253947 rs557211663 C T
EP300 FOS FOSL2 JUND SP1 TCF12 TCF7L2 YY1 ZNF263
881821
chr1 205253956 rs187558266 C T
CTCF EBF1 EP300 FOS FOSL2 JUND SP1 TCF12 TCF7L2 TFAP2A TFAP2B TFAP2C YY1 ZNF263
881822
chr1 205254126 rs543864280 C A,G,T
CEBPB EP300 FOS FOSL2 JUND RUNX3 TCF12 TCF7L2 YY1
881823
chr1 205254201 rs114321753 C T
CEBPB EP300 RUNX3 TCF12 TCF7L2
881824
Genes possibly regulated by vista4727[chr1:205253892-205254222]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr1 205111632 205180727 - DSTYK ENSG00000133059.12 205180727 0.65 0.99 1760 26835
chr1 205197304 205242471 + TMCC2 ENSG00000133069.10 205197304 0.81 1.0 1761 43412
chr1 205271187 205290883 - NUAK2 ENSG00000163545.7 205290883 0.81 0.97 1762 63339
chr1 205305220 205326218 - KLHDC8A ENSG00000162873.10 205326218 1.0 0.95 1763 28004
Expression level of Genes
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miRNAs possibly regulated by vista4727[chr1:205253892-205254222]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results