EnhancerDB
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  3. vista4748[chr1:205426466-205427019]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista4748[chr1:205426466-205427019]
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Tissue distribution of vista4748
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Transcription factor that possibly regulate vista4748[chr1:205426466-205427019]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr1 205426471 205426486 TFAP2A JASPAR yes 118441298
chr1 205426475 205426484 TFAP2A JASPAR yes 118441299
chr1 205426479 205426484 SP1 TRANSFAC yes 118441300
chr1 205426492 205426511 CTCF JASPAR yes 118441301
chr1 205426525 205426530 SP1 TRANSFAC yes 118441302
chr1 205426525 205426531 SP1 TRANSFAC yes 118441303
chr1 205426527 205426536 SP1 TRANSFAC yes 118441304
chr1 205426528 205426534 SP1 TRANSFAC yes 118441305
chr1 205426528 205426538 SP1 JASPAR yes 118441306
chr1 205426529 205426536 SP1 TRANSFAC yes 118441307
chr1 205426530 205426535 SP1 TRANSFAC yes 118441308
chr1 205426530 205426536 SP1 TRANSFAC yes 118441309
chr1 205426533 205426539 SP1 TRANSFAC yes 118441310
chr1 205426533 205426543 SP1 JASPAR yes 118441311
chr1 205426533 205426543 SP1 TRANSFAC yes 118441312
chr1 205426533 205426554 ZNF263 JASPAR yes 118441313
chr1 205426538 205426544 SP1 TRANSFAC yes 118441314
chr1 205426538 205426548 SP1 JASPAR yes 118441315
chr1 205426544 205426550 SP1 TRANSFAC yes 118441316
chr1 205426557 205426564 E2F1 TRANSFAC yes 118441317
chr1 205426559 205426573 NR2F1 JASPAR yes 118441318
chr1 205426559 205426574 NR2C2 JASPAR yes 118441319
chr1 205426566 205426581 NR2C2 JASPAR yes 118441320
chr1 205426567 205426577 SP1 TRANSFAC yes 118441321
chr1 205426568 205426578 SP1 JASPAR yes 118441322
chr1 205426569 205426575 SP1 TRANSFAC yes 118441323
chr1 205426569 205426579 SP1 JASPAR yes 118441324
chr1 205426569 205426579 SP1 TRANSFAC yes 118441325
chr1 205426574 205426580 SP1 TRANSFAC yes 118441326
chr1 205426574 205426584 SP1 JASPAR yes 118441327
chr1 205426580 205426584 H1TF2 TRANSFAC yes 118441328
chr1 205426580 205426584 NFE TRANSFAC yes 118441329
chr1 205426580 205426584 SRF TRANSFAC yes 118441330
chr1 205426583 205426602 REST JASPAR yes 118441331
chr1 205426599 205426604 TFAP2A TRANSFAC yes 118441332
chr1 205426599 205426605 MZF1 JASPAR yes 118441333
chr1 205426613 205426623 MZF1 JASPAR yes 118441334
chr1 205426646 205426651 GATA1 TRANSFAC yes 118441335
chr1 205426650 205426671 ZNF263 JASPAR yes 118441336
chr1 205426655 205426676 ZNF263 JASPAR yes 118441337
chr1 205426658 205426669 E2F4 JASPAR yes 118441338
chr1 205426658 205426669 E2F6 JASPAR yes 118441339
chr1 205426659 205426670 E2F1 JASPAR yes 118441340
chr1 205426662 205426676 PLAG1 JASPAR yes 118441341
chr1 205426668 205426673 SP1 TRANSFAC yes 118441342
chr1 205426669 205426681 INSM1 JASPAR yes 118441343
chr1 205426680 205426701 ZNF263 JASPAR yes 118441344
chr1 205426682 205426696 SPI1 JASPAR yes 118441345
chr1 205426683 205426693 MZF1 JASPAR yes 118441346
chr1 205426683 205426696 ELF1 JASPAR yes 118441347
chr1 205426683 205426704 ZNF263 JASPAR yes 118441348
chr1 205426684 205426696 EHF JASPAR yes 118441349
chr1 205426684 205426696 ELF1 JASPAR yes 118441350
chr1 205426684 205426696 ELF4 JASPAR yes 118441351
chr1 205426684 205426697 ELF3 JASPAR yes 118441352
chr1 205426685 205426690 SP1 TRANSFAC yes 118441353
chr1 205426685 205426696 ELF5 JASPAR yes 118441354
chr1 205426686 205426696 ELK1 JASPAR yes 118441355
chr1 205426686 205426696 ELK3 JASPAR yes 118441356
chr1 205426686 205426696 ETV5 JASPAR yes 118441357
chr1 205426686 205426696 ETV6 JASPAR yes 118441358
chr1 205426686 205426696 GABPA JASPAR yes 118441359
chr1 205426686 205426697 ELK4 JASPAR yes 118441360
chr1 205426686 205426697 FLI1 JASPAR yes 118441361
chr1 205426688 205426694 ETS1 JASPAR yes 118441362
chr1 205426688 205426694 SPI1 JASPAR yes 118441363
chr1 205426688 205426708 RREB1 JASPAR yes 118441364
chr1 205426689 205426710 ZNF263 JASPAR yes 118441365
chr1 205426693 205426703 SP1 JASPAR yes 118441366
chr1 205426693 205426703 ZNF740 JASPAR yes 118441367
chr1 205426694 205426704 SP1 JASPAR yes 118441368
chr1 205426694 205426704 ZNF740 JASPAR yes 118441369
chr1 205426695 205426705 SP1 JASPAR yes 118441370
chr1 205426695 205426705 ZNF740 JASPAR yes 118441371
chr1 205426695 205426710 NR2C2 JASPAR yes 118441372
chr1 205426696 205426706 SP1 JASPAR yes 118441373
chr1 205426696 205426706 ZNF740 JASPAR yes 118441374
chr1 205426697 205426707 SP1 JASPAR yes 118441375
chr1 205426697 205426707 ZNF740 JASPAR yes 118441376
chr1 205426698 205426708 SP1 JASPAR yes 118441377
chr1 205426698 205426708 ZNF740 JASPAR yes 118441378
chr1 205426699 205426709 ZNF740 JASPAR yes 118441379
chr1 205426703 205426717 PLAG1 JASPAR yes 118441380
chr1 205426704 205426723 CTCF JASPAR yes 118441381
chr1 205426705 205426709 LFA1 TRANSFAC yes 118441382
chr1 205426705 205426720 ZIC3 JASPAR yes 118441383
chr1 205426705 205426720 ZIC4 JASPAR yes 118441384
chr1 205426706 205426720 ZIC1 JASPAR yes 118441385
chr1 205426712 205426732 ESR1 JASPAR yes 118441386
chr1 205426719 205426723 ESR1 TRANSFAC yes 118441387
chr1 205426719 205426730 USF1 JASPAR yes 118441388
chr1 205426719 205426730 USF2 JASPAR yes 118441389
chr1 205426720 205426727 USF2 TRANSFAC yes 118441390
chr1 205426720 205426730 SREBF2 JASPAR yes 118441391
chr1 205426722 205426727 USF2 TRANSFAC yes 118441392
chr1 205426780 205426798 ESR1 JASPAR yes 118441393
chr1 205426802 205426808 NFE2 TRANSFAC yes 118441394
chr1 205426819 205426825 SOX10 JASPAR yes 118441395
chr1 205426829 205426835 YY1 JASPAR yes 118441396
chr1 205426844 205426850 TCF4 TRANSFAC yes 118441397
chr1 205426850 205426871 ZNF263 JASPAR yes 118441398
chr1 205426851 205426872 ZNF263 JASPAR yes 118441399
chr1 205426883 205426887 H1TF2 TRANSFAC yes 118441400
chr1 205426883 205426887 NFE TRANSFAC yes 118441401
chr1 205426883 205426887 SRF TRANSFAC yes 118441402
chr1 205426890 205426905 HNF1A JASPAR yes 118441403
chr1 205426904 205426909 ETS2 TRANSFAC yes 118441404
chr1 205426919 205426925 NFIC JASPAR yes 118441405
chr1 205426928 205426938 POU6F2 JASPAR yes 118441406
chr1 205426929 205426939 EMX1 JASPAR yes 118441407
chr1 205426929 205426939 GSX2 JASPAR yes 118441408
chr1 205426929 205426939 HOXA2 JASPAR yes 118441409
chr1 205426929 205426939 HOXB2 JASPAR yes 118441410
chr1 205426929 205426939 HOXB3 JASPAR yes 118441411
chr1 205426929 205426939 LHX2 JASPAR yes 118441412
chr1 205426929 205426939 MEOX1 JASPAR yes 118441413
chr1 205426929 205426939 NOTO JASPAR yes 118441414
chr1 205426930 205426938 NKX6-1 JASPAR yes 118441415
chr1 205426930 205426938 NKX6-2 JASPAR yes 118441416
chr1 205426932 205426936 YY1 TRANSFAC yes 118441417
chr1 205426935 205426938 MYB TRANSFAC yes 118441418
chr1 205426936 205426951 STAT1 JASPAR yes 118441419
chr1 205426938 205426949 STAT3 JASPAR yes 118441420
chr1 205426946 205426951 ETS2 TRANSFAC yes 118441421
chr1 205426946 205426954 FEV JASPAR yes 118441422
chr1 205426947 205426958 NFKB1 JASPAR yes 118441423
chr1 205426948 205426958 REL JASPAR yes 118441424
chr1 205426963 205426969 TCF1 TRANSFAC yes 118441425
chr1 205426963 205426970 TCF4 TRANSFAC yes 118441426
chr1 205426970 205426981 ELK4 JASPAR yes 118441427
chr1 205426970 205426981 FLI1 JASPAR yes 118441428
chr1 205426974 205426991 BCL6B JASPAR yes 118441429
chr1 205426978 205426984 NFIC JASPAR yes 118441430
chr1 205426993 205426997 YY1 TRANSFAC yes 118441431
SNP sites on vista4748[chr1:205426466-205427019]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr1 205426488 rs115885031 G C no 883507
chr1 205426528 rs192041534 G A
SP1
883508
chr1 205426557 rs529339265 G C
E2F1
883509
chr1 205426559 rs549011588 T C
E2F1 NR2C2 NR2F1
883510
chr1 205426616 rs568888370 A G
MZF1
883511
chr1 205426620 rs6682726 G A
MZF1
883512
chr1 205426694 rs143181392 GT G
EHF ELF1 ELF3 ELF4 ELF5 ELK1 ELK3 ELK4 ETS1 ETV5 ETV6 FLI1 GABPA RREB1 SP1 SPI1 ZNF263 ZNF740
883513
chr1 205426997 rs534355790 T C
YY1
883514
Genes possibly regulated by vista4748[chr1:205426466-205427019]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr1 205350506 205425082 - LEMD1 ENSG00000186007.5 205425082 0.86 1.0 1764 98616
chr1 205473723 205501921 + CDK18 ENSG00000117266.11 205473723 0.8 1.0 1765 53296
Expression level of Genes
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miRNAs possibly regulated by vista4748[chr1:205426466-205427019]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results