EnhancerDB
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  3. vista476[chr1:15649550-15649749]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista476[chr1:15649550-15649749]
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Tissue distribution of vista476
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Transcription factor that possibly regulate vista476[chr1:15649550-15649749]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr1 15649561 15649571 NFKB1 JASPAR yes 26978309
chr1 15649561 15649571 NFKB1 JASPAR yes 118236252
chr1 15649561 15649572 NFKB1 JASPAR yes 26978310
chr1 15649561 15649572 NFKB1 JASPAR yes 118236253
chr1 15649562 15649572 RELA JASPAR yes 26978311
chr1 15649562 15649572 REL JASPAR yes 26978312
chr1 15649562 15649572 RELA JASPAR yes 118236254
chr1 15649562 15649572 REL JASPAR yes 118236255
chr1 15649577 15649588 FOS JASPAR yes 26978313
chr1 15649577 15649588 FOS JASPAR yes 118236256
chr1 15649578 15649591 DUXA JASPAR yes 26978314
chr1 15649578 15649591 DUXA JASPAR yes 118236257
chr1 15649579 15649590 DUX4 JASPAR yes 26978315
chr1 15649579 15649590 DUX4 JASPAR yes 118236258
chr1 15649588 15649603 ZIC3 JASPAR yes 26978316
chr1 15649588 15649603 ZIC3 JASPAR yes 118236259
chr1 15649592 15649603 EBF1 JASPAR yes 26978317
chr1 15649592 15649603 EBF1 JASPAR yes 118236260
chr1 15649592 15649606 PLAG1 JASPAR yes 26978318
chr1 15649592 15649606 PLAG1 JASPAR yes 118236261
chr1 15649600 15649604 H4TF2 TRANSFAC yes 26978319
chr1 15649600 15649604 H4TF2 TRANSFAC yes 118236262
chr1 15649604 15649609 SP1 TRANSFAC yes 26978320
chr1 15649604 15649609 SP1 TRANSFAC yes 118236263
chr1 15649612 15649621 NKX3-2 JASPAR yes 26978321
chr1 15649612 15649621 NKX3-2 JASPAR yes 118236264
chr1 15649617 15649633 ZNF143 JASPAR yes 26978322
chr1 15649617 15649633 ZNF143 JASPAR yes 118236265
chr1 15649638 15649643 MYB TRANSFAC yes 26978323
chr1 15649638 15649643 MYB TRANSFAC yes 118236266
chr1 15649675 15649679 NFE TRANSFAC yes 26978324
chr1 15649675 15649679 NFE TRANSFAC yes 118236267
chr1 15649675 15649694 REST JASPAR yes 26978325
chr1 15649675 15649694 REST JASPAR yes 118236268
chr1 15649700 15649712 FOXC2 JASPAR yes 26978326
chr1 15649700 15649712 MEF2D JASPAR yes 26978327
chr1 15649700 15649712 FOXC2 JASPAR yes 118236269
chr1 15649700 15649712 MEF2D JASPAR yes 118236270
chr1 15649701 15649713 FOXI1 JASPAR yes 26978328
chr1 15649701 15649713 FOXI1 JASPAR yes 118236271
chr1 15649715 15649727 TAL1 JASPAR yes 26978329
chr1 15649715 15649727 TAL1 JASPAR yes 118236272
chr1 15649717 15649727 FIGLA JASPAR yes 26978330
chr1 15649717 15649727 MSC JASPAR yes 26978331
chr1 15649717 15649727 MYF6 JASPAR yes 26978332
chr1 15649717 15649727 TFAP4 JASPAR yes 26978333
chr1 15649717 15649727 FIGLA JASPAR yes 118236273
chr1 15649717 15649727 MSC JASPAR yes 118236274
chr1 15649717 15649727 MYF6 JASPAR yes 118236275
chr1 15649717 15649727 TFAP4 JASPAR yes 118236276
chr1 15649717 15649729 TAL1 JASPAR yes 26978334
chr1 15649717 15649729 TAL1 JASPAR yes 118236277
chr1 15649723 15649738 HNF4G JASPAR yes 26978335
chr1 15649723 15649738 HNF4G JASPAR yes 118236278
chr1 15649724 15649733 NFIX JASPAR yes 26978336
chr1 15649724 15649733 NFIX JASPAR yes 118236279
chr1 15649724 15649734 NFIA JASPAR yes 26978337
chr1 15649724 15649734 NFIA JASPAR yes 118236280
chr1 15649724 15649739 HNF4A JASPAR yes 26978338
chr1 15649724 15649739 HNF4A JASPAR yes 118236281
chr1 15649726 15649732 NFIC JASPAR yes 26978339
chr1 15649726 15649732 NFIC JASPAR yes 118236282
SNP sites on vista476[chr1:15649550-15649749]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr1 15649556 rs1969651 C G no 104357
Genes possibly regulated by vista476[chr1:15649550-15649749]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr1 15573768 15726779 + FHAD1 ENSG00000142621.15 15573768 0.93 1.0 204 24218
chr1 15736391 15756839 + EFHD2 ENSG00000142634.8 15736391 0.81 1.0 205 13358
Expression level of Genes
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miRNAs possibly regulated by vista476[chr1:15649550-15649749]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results