EnhancerDB
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  3. vista4780[chr1:206748926-206749451]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista4780[chr1:206748926-206749451]
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Tissue distribution of vista4780
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Transcription factor that possibly regulate vista4780[chr1:206748926-206749451]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr1 206748948 206748952 H1TF2 TRANSFAC yes 34811665
chr1 206748948 206748952 NFE TRANSFAC yes 34811666
chr1 206748948 206748952 SRF TRANSFAC yes 34811667
chr1 206748948 206748952 H1TF2 TRANSFAC yes 118443172
chr1 206748948 206748952 NFE TRANSFAC yes 118443173
chr1 206748948 206748952 SRF TRANSFAC yes 118443174
chr1 206748958 206748979 IRF1 JASPAR yes 34811668
chr1 206748958 206748979 IRF1 JASPAR yes 118443175
chr1 206748962 206748976 SPI1 JASPAR yes 34811669
chr1 206748962 206748976 SPIC JASPAR yes 34811670
chr1 206748962 206748976 SPI1 JASPAR yes 118443176
chr1 206748962 206748976 SPIC JASPAR yes 118443177
chr1 206748963 206748976 ELF1 JASPAR yes 34811671
chr1 206748963 206748976 ELF1 JASPAR yes 118443178
chr1 206748965 206748976 ELF5 JASPAR yes 34811672
chr1 206748965 206748976 ELF5 JASPAR yes 118443179
chr1 206748966 206748973 SPIB JASPAR yes 34811673
chr1 206748966 206748973 SPIB JASPAR yes 118443180
chr1 206748966 206748977 FLI1 JASPAR yes 34811674
chr1 206748966 206748977 FLI1 JASPAR yes 118443181
chr1 206748998 206749002 NFE TRANSFAC yes 34811675
chr1 206748998 206749002 NFE TRANSFAC yes 118443182
chr1 206748998 206749003 GATA1 TRANSFAC yes 34811676
chr1 206748998 206749003 GATA1 TRANSFAC yes 118443183
chr1 206748998 206749004 GATA3 JASPAR yes 34811677
chr1 206748998 206749004 GATA3 JASPAR yes 118443184
chr1 206749030 206749035 SP1 TRANSFAC yes 34811678
chr1 206749030 206749035 SP1 TRANSFAC yes 118443185
chr1 206749053 206749063 SREBF2 JASPAR yes 34811679
chr1 206749053 206749063 SREBF2 JASPAR yes 118443186
chr1 206749055 206749069 SPI1 JASPAR yes 34811680
chr1 206749055 206749069 SPI1 JASPAR yes 118443187
chr1 206749063 206749068 H4TF1 TRANSFAC yes 34811681
chr1 206749063 206749068 H4TF1 TRANSFAC yes 118443188
chr1 206749064 206749082 SRF JASPAR yes 34811682
chr1 206749064 206749082 SRF JASPAR yes 118443189
chr1 206749069 206749083 GATA2 JASPAR yes 34811683
chr1 206749069 206749083 GATA2 JASPAR yes 118443190
chr1 206749071 206749079 GATA3 JASPAR yes 34811684
chr1 206749071 206749079 GATA5 JASPAR yes 34811685
chr1 206749071 206749079 GATA3 JASPAR yes 118443191
chr1 206749071 206749079 GATA5 JASPAR yes 118443192
chr1 206749071 206749085 STAT1 JASPAR yes 34811686
chr1 206749071 206749085 STAT1 JASPAR yes 118443193
chr1 206749071 206749086 STAT2 JASPAR yes 34811687
chr1 206749071 206749086 STAT2 JASPAR yes 118443194
chr1 206749075 206749080 ETS2 TRANSFAC yes 34811688
chr1 206749075 206749080 ETS2 TRANSFAC yes 118443195
chr1 206749084 206749098 PLAG1 JASPAR yes 34811689
chr1 206749084 206749098 PLAG1 JASPAR yes 118443196
chr1 206749095 206749105 ETV6 JASPAR yes 34811690
chr1 206749095 206749105 ETV6 JASPAR yes 118443197
chr1 206749097 206749102 ETS2 TRANSFAC yes 34811691
chr1 206749097 206749102 ETS2 TRANSFAC yes 118443198
chr1 206749107 206749113 MZF1 JASPAR yes 34811692
chr1 206749107 206749113 MZF1 JASPAR yes 118443199
chr1 206749112 206749120 CREB1 JASPAR yes 34811693
chr1 206749112 206749120 CREB1 JASPAR yes 118443200
chr1 206749113 206749127 RXRB JASPAR yes 34811694
chr1 206749113 206749127 RXRG JASPAR yes 34811695
chr1 206749113 206749127 RXRB JASPAR yes 118443201
chr1 206749113 206749127 RXRG JASPAR yes 118443202
chr1 206749114 206749119 ATF1 TRANSFAC yes 34811696
chr1 206749114 206749119 ATF1 TRANSFAC yes 118443203
chr1 206749121 206749138 RARA JASPAR yes 34811697
chr1 206749121 206749138 RARA JASPAR yes 118443204
chr1 206749122 206749126 ESR1 TRANSFAC yes 34811698
chr1 206749122 206749126 ESR1 TRANSFAC yes 118443205
chr1 206749125 206749129 YY1 TRANSFAC yes 34811699
chr1 206749125 206749129 YY1 TRANSFAC yes 118443206
chr1 206749140 206749144 YY1 TRANSFAC yes 34811700
chr1 206749140 206749144 YY1 TRANSFAC yes 118443207
chr1 206749159 206749169 NFIA JASPAR yes 34811701
chr1 206749159 206749169 NFIA JASPAR yes 118443208
chr1 206749161 206749167 NFIC JASPAR yes 34811702
chr1 206749161 206749167 NFIC JASPAR yes 118443209
chr1 206749184 206749187 MYB TRANSFAC yes 34811703
chr1 206749184 206749187 MYB TRANSFAC yes 118443210
chr1 206749184 206749199 HNF4G JASPAR yes 34811704
chr1 206749184 206749199 HNF4G JASPAR yes 118443211
chr1 206749185 206749199 NR2F1 JASPAR yes 34811705
chr1 206749185 206749199 NR2F1 JASPAR yes 118443212
chr1 206749185 206749200 HNF4A JASPAR yes 34811706
chr1 206749185 206749200 HNF4A JASPAR yes 118443213
chr1 206749223 206749238 TFAP2C JASPAR yes 34811707
chr1 206749223 206749238 TFAP2C JASPAR yes 118443214
chr1 206749235 206749247 NHLH1 JASPAR yes 34811708
chr1 206749235 206749247 NHLH1 JASPAR yes 118443215
chr1 206749266 206749281 NR2C2 JASPAR yes 34811709
chr1 206749266 206749281 NR2C2 JASPAR yes 118443216
chr1 206749276 206749281 SP1 TRANSFAC yes 34811710
chr1 206749276 206749281 SP1 TRANSFAC yes 118443217
chr1 206749277 206749292 HNF4A JASPAR yes 34811711
chr1 206749277 206749292 HNF4A JASPAR yes 118443218
chr1 206749290 206749301 NFKB1 JASPAR yes 34811712
chr1 206749290 206749301 NFKB1 JASPAR yes 118443219
chr1 206749296 206749302 MZF1 JASPAR yes 34811713
chr1 206749296 206749302 MZF1 JASPAR yes 118443220
chr1 206749304 206749308 NFE TRANSFAC yes 34811714
chr1 206749304 206749308 NFE TRANSFAC yes 118443221
chr1 206749321 206749337 NFYA JASPAR yes 34811715
chr1 206749321 206749337 NFYA JASPAR yes 118443222
chr1 206749325 206749336 FOXH1 JASPAR yes 34811716
chr1 206749325 206749336 FOXH1 JASPAR yes 118443223
chr1 206749326 206749330 H1TF2 TRANSFAC yes 34811717
chr1 206749326 206749330 NFE TRANSFAC yes 34811718
chr1 206749326 206749330 SRF TRANSFAC yes 34811719
chr1 206749326 206749330 H1TF2 TRANSFAC yes 118443224
chr1 206749326 206749330 NFE TRANSFAC yes 118443225
chr1 206749326 206749330 SRF TRANSFAC yes 118443226
chr1 206749328 206749341 SCRT2 JASPAR yes 34811720
chr1 206749328 206749341 SCRT2 JASPAR yes 118443227
chr1 206749328 206749343 SCRT1 JASPAR yes 34811721
chr1 206749328 206749343 SCRT1 JASPAR yes 118443228
chr1 206749332 206749342 MSC JASPAR yes 34811722
chr1 206749332 206749342 MSC JASPAR yes 118443229
chr1 206749338 206749342 YY1 TRANSFAC yes 34811723
chr1 206749338 206749342 YY1 TRANSFAC yes 118443230
chr1 206749341 206749354 SMAD2 JASPAR yes 34811724
chr1 206749341 206749354 SMAD2 JASPAR yes 118443231
chr1 206749344 206749355 TBX2 JASPAR yes 34811725
chr1 206749344 206749355 TBX2 JASPAR yes 118443232
chr1 206749346 206749354 TBX15 JASPAR yes 34811726
chr1 206749346 206749354 TBX1 JASPAR yes 34811727
chr1 206749346 206749354 TBX4 JASPAR yes 34811728
chr1 206749346 206749354 TBX5 JASPAR yes 34811729
chr1 206749346 206749354 TBX15 JASPAR yes 118443233
chr1 206749346 206749354 TBX1 JASPAR yes 118443234
chr1 206749346 206749354 TBX4 JASPAR yes 118443235
chr1 206749346 206749354 TBX5 JASPAR yes 118443236
chr1 206749387 206749396 NFIX JASPAR yes 34811730
chr1 206749387 206749396 NFIX JASPAR yes 118443237
chr1 206749387 206749397 NFIA JASPAR yes 34811731
chr1 206749387 206749397 NFIA JASPAR yes 118443238
chr1 206749389 206749395 NFIC JASPAR yes 34811732
chr1 206749389 206749395 NFIC JASPAR yes 118443239
chr1 206749415 206749428 SMAD2 JASPAR yes 34811733
chr1 206749415 206749428 SMAD2 JASPAR yes 118443240
chr1 206749445 206749450 TFAP2A TRANSFAC yes 34811734
chr1 206749445 206749450 TFAP2A TRANSFAC yes 118443241
chr1 206749445 206749451 MZF1 JASPAR yes 34811735
chr1 206749445 206749451 MZF1 JASPAR yes 118443242
chr1 206749450 206749461 DUX4 JASPAR yes 34811736
chr1 206749450 206749461 DUX4 JASPAR yes 118443243
SNP sites on vista4780[chr1:206748926-206749451]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr1 206748999 rs145172220 CTATCT C
GATA1 GATA3 NFE
889345
chr1 206749117 rs11800172 G A
ATF1 CREB1 RXRB RXRG
889346
chr1 206749181 rs6660116 C G,T no 889347
chr1 206749294 rs564978550 G T
NFKB1
889348
chr1 206749336 rs116217606 A T
FOXH1 MSC NFYA SCRT1 SCRT2
889349
Genes possibly regulated by vista4780[chr1:206748926-206749451]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr1 206664449 206671061 - C1orf147 ENSG00000162888.4 206671061 0.88 1.0 1781 22135
chr1 206680879 206762616 + RASSF5 ENSG00000136653.15 206680879 0.87 0.99 1782 31953
chr1 206744620 206785904 - EIF2D ENSG00000143486.11 206785904 0.58 1.0 1783 63547
chr1 206808881 206857764 + DYRK3 ENSG00000143479.11 206808881 0.71 0.98 1784 40570
Expression level of Genes
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miRNAs possibly regulated by vista4780[chr1:206748926-206749451]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results