EnhancerDB
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  3. vista479[chr1:15664580-15664866]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista479[chr1:15664580-15664866]
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Tissue distribution of vista479
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Transcription factor that possibly regulate vista479[chr1:15664580-15664866]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr1 15664579 15664597 MAFF JASPAR yes 26979265
chr1 15664579 15664597 MAFF JASPAR yes 118236420
chr1 15664580 15664595 MAFK JASPAR yes 26979266
chr1 15664580 15664595 MAFK JASPAR yes 118236421
chr1 15664584 15664595 NRL JASPAR yes 26979267
chr1 15664584 15664595 NRL JASPAR yes 118236422
chr1 15664612 15664619 NFATC2 JASPAR yes 26979268
chr1 15664612 15664619 NFATC2 JASPAR yes 118236423
chr1 15664616 15664636 RREB1 JASPAR yes 26979269
chr1 15664616 15664636 RREB1 JASPAR yes 118236424
chr1 15664621 15664641 RREB1 JASPAR yes 26979270
chr1 15664621 15664641 RREB1 JASPAR yes 118236425
chr1 15664622 15664642 RREB1 JASPAR yes 26979271
chr1 15664622 15664642 RREB1 JASPAR yes 118236426
chr1 15664623 15664633 ZNF740 JASPAR yes 26979272
chr1 15664623 15664633 ZNF740 JASPAR yes 118236427
chr1 15664624 15664644 RREB1 JASPAR yes 26979273
chr1 15664624 15664644 RREB1 JASPAR yes 118236428
chr1 15664625 15664645 RREB1 JASPAR yes 26979274
chr1 15664625 15664645 RREB1 JASPAR yes 118236429
chr1 15664625 15664646 ZNF263 JASPAR yes 26979275
chr1 15664625 15664646 ZNF263 JASPAR yes 118236430
chr1 15664626 15664646 RREB1 JASPAR yes 26979276
chr1 15664626 15664646 RREB1 JASPAR yes 118236431
chr1 15664627 15664647 RREB1 JASPAR yes 26979277
chr1 15664627 15664647 RREB1 JASPAR yes 118236432
chr1 15664632 15664642 ZNF740 JASPAR yes 26979278
chr1 15664632 15664642 ZNF740 JASPAR yes 118236433
chr1 15664636 15664656 TBX19 JASPAR yes 26979279
chr1 15664636 15664656 TBX19 JASPAR yes 118236434
chr1 15664638 15664654 T JASPAR yes 26979280
chr1 15664638 15664654 T JASPAR yes 118236435
chr1 15664639 15664654 ZIC3 JASPAR yes 26979281
chr1 15664639 15664654 ZIC3 JASPAR yes 118236436
chr1 15664646 15664656 TBR1 JASPAR yes 26979282
chr1 15664646 15664656 TBR1 JASPAR yes 118236437
chr1 15664659 15664670 FLI1 JASPAR yes 26979283
chr1 15664659 15664670 FLI1 JASPAR yes 118236438
chr1 15664660 15664670 GABPA JASPAR yes 26979284
chr1 15664660 15664670 GABPA JASPAR yes 118236439
chr1 15664674 15664685 DMRT3 JASPAR yes 26979285
chr1 15664674 15664685 DMRT3 JASPAR yes 118236440
chr1 15664678 15664681 MYB TRANSFAC yes 26979286
chr1 15664678 15664681 MYB TRANSFAC yes 118236441
chr1 15664684 15664699 RUNX2 JASPAR yes 26979287
chr1 15664684 15664699 RUNX2 JASPAR yes 118236442
chr1 15664714 15664718 YY1 TRANSFAC yes 26979288
chr1 15664714 15664718 YY1 TRANSFAC yes 118236443
chr1 15664720 15664726 MYC TRANSFAC yes 26979289
chr1 15664720 15664726 MYC TRANSFAC yes 118236444
chr1 15664733 15664741 OTX1 JASPAR yes 26979290
chr1 15664733 15664741 OTX2 JASPAR yes 26979291
chr1 15664733 15664741 OTX1 JASPAR yes 118236445
chr1 15664733 15664741 OTX2 JASPAR yes 118236446
chr1 15664733 15664742 PITX3 JASPAR yes 26979292
chr1 15664733 15664742 PITX3 JASPAR yes 118236447
chr1 15664738 15664749 PHOX2A JASPAR yes 26979293
chr1 15664738 15664749 PROP1 JASPAR yes 26979294
chr1 15664738 15664749 PHOX2A JASPAR yes 118236448
chr1 15664738 15664749 PROP1 JASPAR yes 118236449
chr1 15664762 15664767 ETS2 TRANSFAC yes 26979295
chr1 15664762 15664767 ETS2 TRANSFAC yes 118236450
chr1 15664765 15664771 ETS1 JASPAR yes 26979296
chr1 15664765 15664771 SPI1 JASPAR yes 26979297
chr1 15664765 15664771 ETS1 JASPAR yes 118236451
chr1 15664765 15664771 SPI1 JASPAR yes 118236452
chr1 15664765 15664775 ELK1 JASPAR yes 26979298
chr1 15664765 15664775 ELK1 JASPAR yes 118236453
chr1 15664782 15664797 STAT2 JASPAR yes 26979299
chr1 15664782 15664797 STAT2 JASPAR yes 118236454
chr1 15664783 15664797 STAT1 JASPAR yes 26979300
chr1 15664783 15664797 STAT1 JASPAR yes 118236455
chr1 15664786 15664791 GATA2 JASPAR yes 26979301
chr1 15664786 15664791 GATA2 JASPAR yes 118236456
chr1 15664789 15664800 FLI1 JASPAR yes 26979302
chr1 15664789 15664800 FLI1 JASPAR yes 118236457
chr1 15664824 15664829 ETS2 TRANSFAC yes 26979303
chr1 15664824 15664829 ETS2 TRANSFAC yes 118236458
chr1 15664829 15664839 TEAD1 JASPAR yes 26979304
chr1 15664829 15664839 TEAD4 JASPAR yes 26979305
chr1 15664829 15664839 TEAD1 JASPAR yes 118236459
chr1 15664829 15664839 TEAD4 JASPAR yes 118236460
chr1 15664830 15664838 TEAD3 JASPAR yes 26979306
chr1 15664830 15664838 TEAD3 JASPAR yes 118236461
chr1 15664833 15664838 ETS2 TRANSFAC yes 26979307
chr1 15664833 15664838 ETS2 TRANSFAC yes 118236462
chr1 15664837 15664851 TLX1 JASPAR yes 26979308
chr1 15664837 15664851 TLX1 JASPAR yes 118236463
chr1 15664848 15664858 SP1 JASPAR yes 26979309
chr1 15664848 15664858 SP1 JASPAR yes 118236464
chr1 15664848 15664859 FLI1 JASPAR yes 26979310
chr1 15664848 15664859 FLI1 JASPAR yes 118236465
chr1 15664849 15664859 SP1 JASPAR yes 26979311
chr1 15664849 15664859 SP1 JASPAR yes 118236466
chr1 15664850 15664858 EHF JASPAR yes 26979312
chr1 15664850 15664858 EHF JASPAR yes 118236467
chr1 15664853 15664865 YY1 JASPAR yes 26979313
chr1 15664853 15664865 YY1 JASPAR yes 118236468
chr1 15664858 15664872 TCF7L2 JASPAR yes 26979314
chr1 15664858 15664872 TCF7L2 JASPAR yes 118236469
chr1 15664862 15664868 TCF1 TRANSFAC yes 26979315
chr1 15664862 15664868 TCF1 TRANSFAC yes 118236470
chr1 15664862 15664869 TCF4 TRANSFAC yes 26979316
chr1 15664862 15664869 TCF4 TRANSFAC yes 118236471
SNP sites on vista479[chr1:15664580-15664866]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr1 15664702 rs116630993 G T no 104488
chr1 15664770 rs144261453 C G,T
ELK1 ETS1 SPI1
104489
chr1 15664776 rs533372996 C T no 104490
Genes possibly regulated by vista479[chr1:15664580-15664866]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr1 15573768 15726779 + FHAD1 ENSG00000142621.15 15573768 0.93 1.0 204 9188
chr1 15736391 15756839 + EFHD2 ENSG00000142634.8 15736391 0.81 1.0 205 28475
Expression level of Genes
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miRNAs possibly regulated by vista479[chr1:15664580-15664866]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results