EnhancerDB
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  3. vista48[chr1:1772108-1772256]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista48[chr1:1772108-1772256]
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Tissue distribution of vista48
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Transcription factor that possibly regulate vista48[chr1:1772108-1772256]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr1 1772110 1772116 SOX10 JASPAR yes 26205312
chr1 1772110 1772116 SOX10 JASPAR yes 118215432
chr1 1772113 1772131 TP53 JASPAR yes 26205313
chr1 1772113 1772131 TP53 JASPAR yes 118215433
chr1 1772114 1772131 BCL6B JASPAR yes 26205314
chr1 1772114 1772131 BCL6B JASPAR yes 118215434
chr1 1772146 1772150 H1TF2 TRANSFAC yes 26205315
chr1 1772146 1772150 NFE TRANSFAC yes 26205316
chr1 1772146 1772150 SRF TRANSFAC yes 26205317
chr1 1772146 1772150 H1TF2 TRANSFAC yes 118215435
chr1 1772146 1772150 NFE TRANSFAC yes 118215436
chr1 1772146 1772150 SRF TRANSFAC yes 118215437
chr1 1772151 1772172 ZNF263 JASPAR yes 26205318
chr1 1772151 1772172 ZNF263 JASPAR yes 118215438
chr1 1772159 1772163 NFE TRANSFAC yes 26205319
chr1 1772159 1772163 NFE TRANSFAC yes 118215439
chr1 1772180 1772184 H4TF2 TRANSFAC yes 26205320
chr1 1772180 1772184 H4TF2 TRANSFAC yes 118215440
chr1 1772186 1772193 POU2F1 TRANSFAC yes 26205321
chr1 1772186 1772193 POU2F1 TRANSFAC yes 118215441
chr1 1772191 1772212 REST JASPAR yes 26205322
chr1 1772191 1772212 REST JASPAR yes 118215442
chr1 1772192 1772211 REST JASPAR yes 26205323
chr1 1772192 1772211 REST JASPAR yes 118215443
chr1 1772201 1772216 RFX5 JASPAR yes 26205324
chr1 1772201 1772216 RFX5 JASPAR yes 118215444
chr1 1772207 1772219 TEAD1 JASPAR yes 26205325
chr1 1772207 1772219 TEAD1 JASPAR yes 118215445
chr1 1772208 1772215 ETS1 TRANSFAC yes 26205326
chr1 1772208 1772215 ETS1 TRANSFAC yes 118215446
chr1 1772209 1772217 EHF JASPAR yes 26205327
chr1 1772209 1772217 EHF JASPAR yes 118215447
chr1 1772229 1772241 PKNOX1 JASPAR yes 26205328
chr1 1772229 1772241 PKNOX1 JASPAR yes 118215448
SNP sites on vista48[chr1:1772108-1772256]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
Genes possibly regulated by vista48[chr1:1772108-1772256]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr1 1656277 1677431 - SLC35E2 ENSG00000215790.2 1677431 0.71 0.99 50 5323
chr1 1682671 1711896 - NADK ENSG00000008130.11 1711896 0.71 1.0 51 39788
chr1 1716729 1822495 - GNB1 ENSG00000078369.13 1822495 0.7 1.0 52 49761
chr1 1846266 1848735 + CALML6 ENSG00000169885.5 1846266 0.87 1.0 53 25990
chr1 1849029 1850712 - TMEM52 ENSG00000178821.8 1850712 0.99 1.0 54 21544
Expression level of Genes
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miRNAs possibly regulated by vista48[chr1:1772108-1772256]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results