EnhancerDB
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  3. vista480[chr1:15666999-15667145]
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista480[chr1:15666999-15667145]
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Tissue distribution of vista480
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Transcription factor that possibly regulate vista480[chr1:15666999-15667145]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr1 15666991 15667006 RFX5 JASPAR yes 26979658
chr1 15666991 15667006 RFX5 JASPAR yes 118236472
chr1 15666993 15667009 RFX2 JASPAR yes 26979659
chr1 15666993 15667009 RFX3 JASPAR yes 26979660
chr1 15666993 15667009 RFX4 JASPAR yes 26979661
chr1 15666993 15667009 RFX5 JASPAR yes 26979662
chr1 15666993 15667009 RFX2 JASPAR yes 118236473
chr1 15666993 15667009 RFX3 JASPAR yes 118236474
chr1 15666993 15667009 RFX4 JASPAR yes 118236475
chr1 15666993 15667009 RFX5 JASPAR yes 118236476
chr1 15666994 15667013 RFX2 JASPAR yes 26979663
chr1 15666994 15667013 RFX2 JASPAR yes 118236477
chr1 15667011 15667032 IRF1 JASPAR yes 26979664
chr1 15667011 15667032 IRF1 JASPAR yes 118236478
chr1 15667015 15667019 TEAD2 TRANSFAC yes 26979665
chr1 15667015 15667019 TEAD2 TRANSFAC yes 118236479
chr1 15667015 15667020 TBP TRANSFAC yes 26979666
chr1 15667015 15667020 TBP TRANSFAC yes 118236480
chr1 15667015 15667021 TFIID TRANSFAC yes 26979667
chr1 15667015 15667021 TFIID TRANSFAC yes 118236481
chr1 15667015 15667030 PRDM1 JASPAR yes 26979668
chr1 15667015 15667030 PRDM1 JASPAR yes 118236482
chr1 15667024 15667039 NFYB JASPAR yes 26979669
chr1 15667024 15667039 NFYB JASPAR yes 118236483
chr1 15667031 15667035 H1TF2 TRANSFAC yes 26979670
chr1 15667031 15667035 NFE TRANSFAC yes 26979671
chr1 15667031 15667035 SRF TRANSFAC yes 26979672
chr1 15667031 15667035 H1TF2 TRANSFAC yes 118236484
chr1 15667031 15667035 NFE TRANSFAC yes 118236485
chr1 15667031 15667035 SRF TRANSFAC yes 118236486
chr1 15667076 15667094 NFYA JASPAR yes 26979673
chr1 15667076 15667094 NFYA JASPAR yes 118236487
chr1 15667079 15667095 NFYA JASPAR yes 26979674
chr1 15667079 15667095 NFYA JASPAR yes 118236488
chr1 15667082 15667097 NFYB JASPAR yes 26979675
chr1 15667082 15667097 NFYB JASPAR yes 118236489
chr1 15667098 15667108 MAX JASPAR yes 26979676
chr1 15667098 15667108 MAX JASPAR yes 118236490
chr1 15667098 15667109 USF1 JASPAR yes 26979677
chr1 15667098 15667109 USF2 JASPAR yes 26979678
chr1 15667098 15667109 USF1 JASPAR yes 118236491
chr1 15667098 15667109 USF2 JASPAR yes 118236492
chr1 15667099 15667109 TFEB JASPAR yes 26979679
chr1 15667099 15667109 TFEC JASPAR yes 26979680
chr1 15667099 15667109 TFEB JASPAR yes 118236493
chr1 15667099 15667109 TFEC JASPAR yes 118236494
chr1 15667103 15667117 NR2F1 JASPAR yes 26979681
chr1 15667103 15667117 NR2F1 JASPAR yes 118236495
chr1 15667125 15667141 SRF JASPAR yes 26979682
chr1 15667125 15667141 SRF JASPAR yes 118236496
chr1 15667126 15667138 SRF JASPAR yes 26979683
chr1 15667126 15667138 SRF JASPAR yes 118236497
chr1 15667136 15667141 SP1 TRANSFAC yes 26979684
chr1 15667136 15667141 SP1 TRANSFAC yes 118236498
chr1 15667137 15667142 SP1 TRANSFAC yes 26979685
chr1 15667137 15667142 SP1 TRANSFAC yes 118236499
chr1 15667137 15667146 HIC2 JASPAR yes 26979686
chr1 15667137 15667146 HIC2 JASPAR yes 118236500
chr1 15667140 15667144 LFA1 TRANSFAC yes 26979687
chr1 15667140 15667144 LFA1 TRANSFAC yes 118236501
SNP sites on vista480[chr1:15666999-15667145]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr1 15667138 rs190133948 G A
HIC2 SP1 SRF
104515
Genes possibly regulated by vista480[chr1:15666999-15667145]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr1 15573768 15726779 + FHAD1 ENSG00000142621.15 15573768 0.93 1.0 204 6769
chr1 15736391 15756839 + EFHD2 ENSG00000142634.8 15736391 0.81 1.0 205 30754
chr1 15764935 15775737 + CTRC ENSG00000162438.7 15764935 1.0 0.88 206 2210
Expression level of Genes
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miRNAs possibly regulated by vista480[chr1:15666999-15667145]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results